Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021855
         (785 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z14133-1|CAA78507.1| 1678|Drosophila melanogaster clathrin heavy...   243   2e-64
AY119615-1|AAM50269.1| 1678|Drosophila melanogaster LD43101p pro...   243   2e-64
AE014298-2242|AAS65353.1| 1678|Drosophila melanogaster CG9012-PD...   243   2e-64
AE014298-2241|AAS65352.1| 1678|Drosophila melanogaster CG9012-PC...   243   2e-64
AE014298-2240|AAN09367.1| 1678|Drosophila melanogaster CG9012-PB...   243   2e-64
AE014298-2239|AAF48522.1| 1678|Drosophila melanogaster CG9012-PA...   243   2e-64
AY051659-1|AAK93083.1| 1390|Drosophila melanogaster LD15203p pro...    29   9.5  
AF151375-1|AAF03776.1| 1390|Drosophila melanogaster Rho-kinase p...    29   9.5  
AE014298-2432|AAF48631.1| 1390|Drosophila melanogaster CG9774-PA...    29   9.5  

>Z14133-1|CAA78507.1| 1678|Drosophila melanogaster clathrin heavy
            chain protein.
          Length = 1678

 Score =  243 bits (595), Expect = 2e-64
 Identities = 123/174 (70%), Positives = 133/174 (76%)
 Frame = +3

Query: 255  LISLLEAALGLERAHMGMFTELAILYSKYKPVKMREHLELFWSRVNIPKVLRAAEHAHLW 434
            LI+LLE+ALGLERAHMGMFTELAILYSK+KP KMREHLELFWSRVNIPKVLRAAE AHLW
Sbjct: 1300 LIALLESALGLERAHMGMFTELAILYSKFKPSKMREHLELFWSRVNIPKVLRAAESAHLW 1359

Query: 435  SELVFLYDKYEEYDNAALTMMQHPTRLGARDTSKT*SLKSRTWNCTTKLSNFT*TTSHFL 614
            SELVFLYDKYEEYDNA L MM HPT        K    K        K   F       L
Sbjct: 1360 SELVFLYDKYEEYDNAVLAMMAHPTEAWREGHFKDIITKVANIELYYKAIEFYLDFKPLL 1419

Query: 615  LNDLLLVLAPRMDHTRAVNFFTKAGHLQLVKAYLRSVQSLNNKAVNEALTRCLL 776
            LND+LLVLAPRMDHTRAV++F+K G+L LVK YLRSVQSLNNKA+NEAL   L+
Sbjct: 1420 LNDMLLVLAPRMDHTRAVSYFSKTGYLPLVKPYLRSVQSLNNKAINEALNGLLI 1473



 Score =  173 bits (421), Expect = 2e-43
 Identities = 80/85 (94%), Positives = 84/85 (98%)
 Frame = +1

Query: 1    AKLLYNNVSNFARLAITLVHLKEFQGAVDSARKANSTRTWKEVCFACVDAGEFRLAQMCG 180
            AKLLYNNVSNFARLAITLV+LKEFQGAVDSARKANSTRTWKEVCFACVDA EFRLAQMCG
Sbjct: 1215 AKLLYNNVSNFARLAITLVYLKEFQGAVDSARKANSTRTWKEVCFACVDAEEFRLAQMCG 1274

Query: 181  LHIVVHADELEDLINYYQDRGHFDD 255
            LHIVVHADELEDLINYYQ+RG+FD+
Sbjct: 1275 LHIVVHADELEDLINYYQNRGYFDE 1299


>AY119615-1|AAM50269.1| 1678|Drosophila melanogaster LD43101p protein.
          Length = 1678

 Score =  243 bits (595), Expect = 2e-64
 Identities = 123/174 (70%), Positives = 133/174 (76%)
 Frame = +3

Query: 255  LISLLEAALGLERAHMGMFTELAILYSKYKPVKMREHLELFWSRVNIPKVLRAAEHAHLW 434
            LI+LLE+ALGLERAHMGMFTELAILYSK+KP KMREHLELFWSRVNIPKVLRAAE AHLW
Sbjct: 1300 LIALLESALGLERAHMGMFTELAILYSKFKPSKMREHLELFWSRVNIPKVLRAAESAHLW 1359

Query: 435  SELVFLYDKYEEYDNAALTMMQHPTRLGARDTSKT*SLKSRTWNCTTKLSNFT*TTSHFL 614
            SELVFLYDKYEEYDNA L MM HPT        K    K        K   F       L
Sbjct: 1360 SELVFLYDKYEEYDNAVLAMMAHPTEAWREGHFKDIITKVANIELYYKAIEFYLDFKPLL 1419

Query: 615  LNDLLLVLAPRMDHTRAVNFFTKAGHLQLVKAYLRSVQSLNNKAVNEALTRCLL 776
            LND+LLVLAPRMDHTRAV++F+K G+L LVK YLRSVQSLNNKA+NEAL   L+
Sbjct: 1420 LNDMLLVLAPRMDHTRAVSYFSKTGYLPLVKPYLRSVQSLNNKAINEALNGLLI 1473



 Score =  173 bits (421), Expect = 2e-43
 Identities = 80/85 (94%), Positives = 84/85 (98%)
 Frame = +1

Query: 1    AKLLYNNVSNFARLAITLVHLKEFQGAVDSARKANSTRTWKEVCFACVDAGEFRLAQMCG 180
            AKLLYNNVSNFARLAITLV+LKEFQGAVDSARKANSTRTWKEVCFACVDA EFRLAQMCG
Sbjct: 1215 AKLLYNNVSNFARLAITLVYLKEFQGAVDSARKANSTRTWKEVCFACVDAEEFRLAQMCG 1274

Query: 181  LHIVVHADELEDLINYYQDRGHFDD 255
            LHIVVHADELEDLINYYQ+RG+FD+
Sbjct: 1275 LHIVVHADELEDLINYYQNRGYFDE 1299


>AE014298-2242|AAS65353.1| 1678|Drosophila melanogaster CG9012-PD,
            isoform D protein.
          Length = 1678

 Score =  243 bits (595), Expect = 2e-64
 Identities = 123/174 (70%), Positives = 133/174 (76%)
 Frame = +3

Query: 255  LISLLEAALGLERAHMGMFTELAILYSKYKPVKMREHLELFWSRVNIPKVLRAAEHAHLW 434
            LI+LLE+ALGLERAHMGMFTELAILYSK+KP KMREHLELFWSRVNIPKVLRAAE AHLW
Sbjct: 1300 LIALLESALGLERAHMGMFTELAILYSKFKPSKMREHLELFWSRVNIPKVLRAAESAHLW 1359

Query: 435  SELVFLYDKYEEYDNAALTMMQHPTRLGARDTSKT*SLKSRTWNCTTKLSNFT*TTSHFL 614
            SELVFLYDKYEEYDNA L MM HPT        K    K        K   F       L
Sbjct: 1360 SELVFLYDKYEEYDNAVLAMMAHPTEAWREGHFKDIITKVANIELYYKAIEFYLDFKPLL 1419

Query: 615  LNDLLLVLAPRMDHTRAVNFFTKAGHLQLVKAYLRSVQSLNNKAVNEALTRCLL 776
            LND+LLVLAPRMDHTRAV++F+K G+L LVK YLRSVQSLNNKA+NEAL   L+
Sbjct: 1420 LNDMLLVLAPRMDHTRAVSYFSKTGYLPLVKPYLRSVQSLNNKAINEALNGLLI 1473



 Score =  173 bits (421), Expect = 2e-43
 Identities = 80/85 (94%), Positives = 84/85 (98%)
 Frame = +1

Query: 1    AKLLYNNVSNFARLAITLVHLKEFQGAVDSARKANSTRTWKEVCFACVDAGEFRLAQMCG 180
            AKLLYNNVSNFARLAITLV+LKEFQGAVDSARKANSTRTWKEVCFACVDA EFRLAQMCG
Sbjct: 1215 AKLLYNNVSNFARLAITLVYLKEFQGAVDSARKANSTRTWKEVCFACVDAEEFRLAQMCG 1274

Query: 181  LHIVVHADELEDLINYYQDRGHFDD 255
            LHIVVHADELEDLINYYQ+RG+FD+
Sbjct: 1275 LHIVVHADELEDLINYYQNRGYFDE 1299


>AE014298-2241|AAS65352.1| 1678|Drosophila melanogaster CG9012-PC,
            isoform C protein.
          Length = 1678

 Score =  243 bits (595), Expect = 2e-64
 Identities = 123/174 (70%), Positives = 133/174 (76%)
 Frame = +3

Query: 255  LISLLEAALGLERAHMGMFTELAILYSKYKPVKMREHLELFWSRVNIPKVLRAAEHAHLW 434
            LI+LLE+ALGLERAHMGMFTELAILYSK+KP KMREHLELFWSRVNIPKVLRAAE AHLW
Sbjct: 1300 LIALLESALGLERAHMGMFTELAILYSKFKPSKMREHLELFWSRVNIPKVLRAAESAHLW 1359

Query: 435  SELVFLYDKYEEYDNAALTMMQHPTRLGARDTSKT*SLKSRTWNCTTKLSNFT*TTSHFL 614
            SELVFLYDKYEEYDNA L MM HPT        K    K        K   F       L
Sbjct: 1360 SELVFLYDKYEEYDNAVLAMMAHPTEAWREGHFKDIITKVANIELYYKAIEFYLDFKPLL 1419

Query: 615  LNDLLLVLAPRMDHTRAVNFFTKAGHLQLVKAYLRSVQSLNNKAVNEALTRCLL 776
            LND+LLVLAPRMDHTRAV++F+K G+L LVK YLRSVQSLNNKA+NEAL   L+
Sbjct: 1420 LNDMLLVLAPRMDHTRAVSYFSKTGYLPLVKPYLRSVQSLNNKAINEALNGLLI 1473



 Score =  173 bits (421), Expect = 2e-43
 Identities = 80/85 (94%), Positives = 84/85 (98%)
 Frame = +1

Query: 1    AKLLYNNVSNFARLAITLVHLKEFQGAVDSARKANSTRTWKEVCFACVDAGEFRLAQMCG 180
            AKLLYNNVSNFARLAITLV+LKEFQGAVDSARKANSTRTWKEVCFACVDA EFRLAQMCG
Sbjct: 1215 AKLLYNNVSNFARLAITLVYLKEFQGAVDSARKANSTRTWKEVCFACVDAEEFRLAQMCG 1274

Query: 181  LHIVVHADELEDLINYYQDRGHFDD 255
            LHIVVHADELEDLINYYQ+RG+FD+
Sbjct: 1275 LHIVVHADELEDLINYYQNRGYFDE 1299


>AE014298-2240|AAN09367.1| 1678|Drosophila melanogaster CG9012-PB,
            isoform B protein.
          Length = 1678

 Score =  243 bits (595), Expect = 2e-64
 Identities = 123/174 (70%), Positives = 133/174 (76%)
 Frame = +3

Query: 255  LISLLEAALGLERAHMGMFTELAILYSKYKPVKMREHLELFWSRVNIPKVLRAAEHAHLW 434
            LI+LLE+ALGLERAHMGMFTELAILYSK+KP KMREHLELFWSRVNIPKVLRAAE AHLW
Sbjct: 1300 LIALLESALGLERAHMGMFTELAILYSKFKPSKMREHLELFWSRVNIPKVLRAAESAHLW 1359

Query: 435  SELVFLYDKYEEYDNAALTMMQHPTRLGARDTSKT*SLKSRTWNCTTKLSNFT*TTSHFL 614
            SELVFLYDKYEEYDNA L MM HPT        K    K        K   F       L
Sbjct: 1360 SELVFLYDKYEEYDNAVLAMMAHPTEAWREGHFKDIITKVANIELYYKAIEFYLDFKPLL 1419

Query: 615  LNDLLLVLAPRMDHTRAVNFFTKAGHLQLVKAYLRSVQSLNNKAVNEALTRCLL 776
            LND+LLVLAPRMDHTRAV++F+K G+L LVK YLRSVQSLNNKA+NEAL   L+
Sbjct: 1420 LNDMLLVLAPRMDHTRAVSYFSKTGYLPLVKPYLRSVQSLNNKAINEALNGLLI 1473



 Score =  173 bits (421), Expect = 2e-43
 Identities = 80/85 (94%), Positives = 84/85 (98%)
 Frame = +1

Query: 1    AKLLYNNVSNFARLAITLVHLKEFQGAVDSARKANSTRTWKEVCFACVDAGEFRLAQMCG 180
            AKLLYNNVSNFARLAITLV+LKEFQGAVDSARKANSTRTWKEVCFACVDA EFRLAQMCG
Sbjct: 1215 AKLLYNNVSNFARLAITLVYLKEFQGAVDSARKANSTRTWKEVCFACVDAEEFRLAQMCG 1274

Query: 181  LHIVVHADELEDLINYYQDRGHFDD 255
            LHIVVHADELEDLINYYQ+RG+FD+
Sbjct: 1275 LHIVVHADELEDLINYYQNRGYFDE 1299


>AE014298-2239|AAF48522.1| 1678|Drosophila melanogaster CG9012-PA,
            isoform A protein.
          Length = 1678

 Score =  243 bits (595), Expect = 2e-64
 Identities = 123/174 (70%), Positives = 133/174 (76%)
 Frame = +3

Query: 255  LISLLEAALGLERAHMGMFTELAILYSKYKPVKMREHLELFWSRVNIPKVLRAAEHAHLW 434
            LI+LLE+ALGLERAHMGMFTELAILYSK+KP KMREHLELFWSRVNIPKVLRAAE AHLW
Sbjct: 1300 LIALLESALGLERAHMGMFTELAILYSKFKPSKMREHLELFWSRVNIPKVLRAAESAHLW 1359

Query: 435  SELVFLYDKYEEYDNAALTMMQHPTRLGARDTSKT*SLKSRTWNCTTKLSNFT*TTSHFL 614
            SELVFLYDKYEEYDNA L MM HPT        K    K        K   F       L
Sbjct: 1360 SELVFLYDKYEEYDNAVLAMMAHPTEAWREGHFKDIITKVANIELYYKAIEFYLDFKPLL 1419

Query: 615  LNDLLLVLAPRMDHTRAVNFFTKAGHLQLVKAYLRSVQSLNNKAVNEALTRCLL 776
            LND+LLVLAPRMDHTRAV++F+K G+L LVK YLRSVQSLNNKA+NEAL   L+
Sbjct: 1420 LNDMLLVLAPRMDHTRAVSYFSKTGYLPLVKPYLRSVQSLNNKAINEALNGLLI 1473



 Score =  173 bits (421), Expect = 2e-43
 Identities = 80/85 (94%), Positives = 84/85 (98%)
 Frame = +1

Query: 1    AKLLYNNVSNFARLAITLVHLKEFQGAVDSARKANSTRTWKEVCFACVDAGEFRLAQMCG 180
            AKLLYNNVSNFARLAITLV+LKEFQGAVDSARKANSTRTWKEVCFACVDA EFRLAQMCG
Sbjct: 1215 AKLLYNNVSNFARLAITLVYLKEFQGAVDSARKANSTRTWKEVCFACVDAEEFRLAQMCG 1274

Query: 181  LHIVVHADELEDLINYYQDRGHFDD 255
            LHIVVHADELEDLINYYQ+RG+FD+
Sbjct: 1275 LHIVVHADELEDLINYYQNRGYFDE 1299


>AY051659-1|AAK93083.1| 1390|Drosophila melanogaster LD15203p
           protein.
          Length = 1390

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 26/81 (32%), Positives = 39/81 (48%)
 Frame = +3

Query: 261 SLLEAALGLERAHMGMFTELAILYSKYKPVKMREHLELFWSRVNIPKVLRAAEHAHLWSE 440
           +LLE    LE+AH G+  EL     +Y+  +++ H E   SR      L + E A+L  E
Sbjct: 672 ALLEKISDLEKAHAGLDFELKAAQGRYQQ-EVKAHQETEKSR------LVSREEANL-QE 723

Query: 441 LVFLYDKYEEYDNAALTMMQH 503
           +  L  K  E  +A +   QH
Sbjct: 724 VKALQSKLNEEKSARIKADQH 744


>AF151375-1|AAF03776.1| 1390|Drosophila melanogaster Rho-kinase
           protein.
          Length = 1390

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 26/81 (32%), Positives = 39/81 (48%)
 Frame = +3

Query: 261 SLLEAALGLERAHMGMFTELAILYSKYKPVKMREHLELFWSRVNIPKVLRAAEHAHLWSE 440
           +LLE    LE+AH G+  EL     +Y+  +++ H E   SR      L + E A+L  E
Sbjct: 672 ALLEKISDLEKAHAGLDFELKAAQGRYQQ-EVKAHQETEKSR------LVSREEANL-QE 723

Query: 441 LVFLYDKYEEYDNAALTMMQH 503
           +  L  K  E  +A +   QH
Sbjct: 724 VKALQSKLNEEKSARIKADQH 744


>AE014298-2432|AAF48631.1| 1390|Drosophila melanogaster CG9774-PA
           protein.
          Length = 1390

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 26/81 (32%), Positives = 39/81 (48%)
 Frame = +3

Query: 261 SLLEAALGLERAHMGMFTELAILYSKYKPVKMREHLELFWSRVNIPKVLRAAEHAHLWSE 440
           +LLE    LE+AH G+  EL     +Y+  +++ H E   SR      L + E A+L  E
Sbjct: 672 ALLEKISDLEKAHAGLDFELKAAQGRYQQ-EVKAHQETEKSR------LVSREEANL-QE 723

Query: 441 LVFLYDKYEEYDNAALTMMQH 503
           +  L  K  E  +A +   QH
Sbjct: 724 VKALQSKLNEEKSARIKADQH 744


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,392,271
Number of Sequences: 53049
Number of extensions: 676770
Number of successful extensions: 1442
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1430
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)