Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021855
         (785 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z30423-1|CAA83003.1| 1681|Caenorhabditis elegans Hypothetical pr...   238   3e-63
AL008866-1|CAA15509.3|  724|Caenorhabditis elegans Hypothetical ...    28   8.7  

>Z30423-1|CAA83003.1| 1681|Caenorhabditis elegans Hypothetical protein
            T20G5.1 protein.
          Length = 1681

 Score =  238 bits (583), Expect = 3e-63
 Identities = 121/174 (69%), Positives = 130/174 (74%)
 Frame = +3

Query: 255  LISLLEAALGLERAHMGMFTELAILYSKYKPVKMREHLELFWSRVNIPKVLRAAEHAHLW 434
            LI+LLEAALGLERAHMGMFTELAILYSKYKP KMREHLELFWSRVNIPKVLRAAE AHLW
Sbjct: 1301 LIALLEAALGLERAHMGMFTELAILYSKYKPEKMREHLELFWSRVNIPKVLRAAEQAHLW 1360

Query: 435  SELVFLYDKYEEYDNAALTMMQHPTRLGARDTSKT*SLKSRTWNCTTKLSNFT*TTSHFL 614
            SELVFLYDKYEEYDNAALTMMQHPT        K    K        K   F       L
Sbjct: 1361 SELVFLYDKYEEYDNAALTMMQHPTESWREQHFKEVIAKVANVELYYKAMQFYLDYKPLL 1420

Query: 615  LNDLLLVLAPRMDHTRAVNFFTKAGHLQLVKAYLRSVQSLNNKAVNEALTRCLL 776
            LNDLL VL+PR+DH+R V FF K   + LVK YLR VQ+LNNKA+NEAL + L+
Sbjct: 1421 LNDLLTVLSPRLDHSRTVLFFNKLKQIPLVKPYLRQVQNLNNKAINEALNQLLI 1474



 Score =  157 bits (381), Expect = 8e-39
 Identities = 67/85 (78%), Positives = 82/85 (96%)
 Frame = +1

Query: 1    AKLLYNNVSNFARLAITLVHLKEFQGAVDSARKANSTRTWKEVCFACVDAGEFRLAQMCG 180
            AK+L+NNVSNFA+L++TLV L E+QGAVD+ARKANST+TWK+VCF+CV+ GEFRLAQMCG
Sbjct: 1216 AKILFNNVSNFAKLSVTLVRLGEYQGAVDAARKANSTKTWKQVCFSCVENGEFRLAQMCG 1275

Query: 181  LHIVVHADELEDLINYYQDRGHFDD 255
            LHIVVHADELE+LIN+YQDRGHF++
Sbjct: 1276 LHIVVHADELEELINFYQDRGHFEE 1300


>AL008866-1|CAA15509.3|  724|Caenorhabditis elegans Hypothetical
           protein B0019.1 protein.
          Length = 724

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +2

Query: 482 CSHDDAASHEAWREGHFKDIITKVANMELYYKAIQFYLDYKPLSP 616
           C +  +AS   W   HF   +      +LY +AI + L +   SP
Sbjct: 363 CDNSTSASSTLWGIAHFSYDVPFETRRKLYTQAIMYSLRFADFSP 407


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,948,400
Number of Sequences: 27780
Number of extensions: 337869
Number of successful extensions: 748
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)