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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021854
         (836 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X75821-1|CAA53455.1|  102|Homo sapiens heat shock protein 10 pro...    61   4e-09
U07550-1|AAA50953.1|  102|Homo sapiens chaperonin 10 protein.          61   4e-09
CR407688-1|CAG28616.1|  102|Homo sapiens HSPE1 protein.                61   4e-09
BC023518-1|AAH23518.1|  102|Homo sapiens heat shock 10kDa protei...    61   4e-09
AJ250915-1|CAB75425.1|  102|Homo sapiens chaperonin 10, Hsp10 pr...    61   4e-09
AC020550-3|AAX93146.1|  102|Homo sapiens unknown protein.              61   4e-09
AF109872-1|AAC96332.1|   97|Homo sapiens chaperonin 10-related p...    59   2e-08
AF107894-1|AAC95387.1|   99|Homo sapiens chaperonin 10 protein.        58   3e-08
BC150182-1|AAI50183.1| 1192|Homo sapiens reticulon 4 protein.          30   9.0  
AY123250-1|AAM64254.1|  986|Homo sapiens RTN4 isoform G protein.       30   9.0  
AY123249-1|AAM64253.1|  986|Homo sapiens RTN4 isoform F protein.       30   9.0  
AY123248-1|AAM64252.1|  986|Homo sapiens RTN4 isoform E protein.       30   9.0  
AY123247-1|AAM64251.1|  986|Homo sapiens RTN4 isoform D protein.       30   9.0  
AY123246-1|AAM64250.1|  986|Homo sapiens RTN4 isoform Ab protein.      30   9.0  
AY123245-1|AAM64249.1|  986|Homo sapiens RTN4 isoform Aa protein.      30   9.0  
AY102285-4|AAM64244.1|  986|Homo sapiens RNT4 protein.                 30   9.0  
AY102285-1|AAM64243.1| 1192|Homo sapiens RTN4 protein.                 30   9.0  
AY102279-1|AAM64248.1| 1192|Homo sapiens RTN4 isoform A protein.       30   9.0  
AJ251383-1|CAB99248.1| 1192|Homo sapiens Nogo-A protein protein.       30   9.0  
AF333336-1|AAK20831.1|  986|Homo sapiens testis specific reticul...    30   9.0  
AF320999-1|AAG40878.1|  960|Homo sapiens Nogo-A protein short fo...    30   9.0  
AF148537-1|AAG12176.1| 1192|Homo sapiens reticulon 4a protein.         30   9.0  
AC092461-1|AAX93116.1|  818|Homo sapiens unknown protein.              30   9.0  
AB073359-1|BAE45717.1|  294|Homo sapiens NOGO-A protein.               30   9.0  
AB040462-1|BAB18927.1| 1192|Homo sapiens RTN-xL protein.               30   9.0  
AB020693-1|BAA74909.2| 1233|Homo sapiens KIAA0886 protein protein.     30   9.0  

>X75821-1|CAA53455.1|  102|Homo sapiens heat shock protein 10
           protein.
          Length = 102

 Score = 61.3 bits (142), Expect = 4e-09
 Identities = 31/51 (60%), Positives = 36/51 (70%)
 Frame = +1

Query: 223 SWSPKRKWRLHPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAK 375
           S S  +   + PV V VGDKVLLPEYGGTKV L  D+K+Y LFR+ DIL K
Sbjct: 51  SGSKGKGGEIQPVSVKVGDKVLLPEYGGTKVVL--DDKDYFLFRDGDILGK 99



 Score = 40.3 bits (90), Expect = 0.008
 Identities = 17/32 (53%), Positives = 24/32 (75%)
 Frame = +2

Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTP 259
           I++PEK+Q KVLQ  VVAVG G++ + G+  P
Sbjct: 31  IMLPEKSQGKVLQATVVAVGSGSKGKGGEIQP 62



 Score = 31.9 bits (69), Expect = 3.0
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +3

Query: 87  AVKRLVPLLDRVLIKRAEAITKTAGGL 167
           A ++ +PL DRVL++R+ A T T GG+
Sbjct: 5   AFRKFLPLFDRVLVERSAAETVTKGGI 31


>U07550-1|AAA50953.1|  102|Homo sapiens chaperonin 10 protein.
          Length = 102

 Score = 61.3 bits (142), Expect = 4e-09
 Identities = 31/51 (60%), Positives = 36/51 (70%)
 Frame = +1

Query: 223 SWSPKRKWRLHPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAK 375
           S S  +   + PV V VGDKVLLPEYGGTKV L  D+K+Y LFR+ DIL K
Sbjct: 51  SGSKGKGGEIQPVSVKVGDKVLLPEYGGTKVVL--DDKDYFLFRDGDILGK 99



 Score = 40.3 bits (90), Expect = 0.008
 Identities = 17/32 (53%), Positives = 24/32 (75%)
 Frame = +2

Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTP 259
           I++PEK+Q KVLQ  VVAVG G++ + G+  P
Sbjct: 31  IMLPEKSQGKVLQATVVAVGSGSKGKGGEIQP 62



 Score = 31.9 bits (69), Expect = 3.0
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +3

Query: 87  AVKRLVPLLDRVLIKRAEAITKTAGGL 167
           A ++ +PL DRVL++R+ A T T GG+
Sbjct: 5   AFRKFLPLFDRVLVERSAAETVTKGGI 31


>CR407688-1|CAG28616.1|  102|Homo sapiens HSPE1 protein.
          Length = 102

 Score = 61.3 bits (142), Expect = 4e-09
 Identities = 31/51 (60%), Positives = 36/51 (70%)
 Frame = +1

Query: 223 SWSPKRKWRLHPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAK 375
           S S  +   + PV V VGDKVLLPEYGGTKV L  D+K+Y LFR+ DIL K
Sbjct: 51  SGSKGKGGEIQPVSVKVGDKVLLPEYGGTKVVL--DDKDYFLFRDGDILGK 99



 Score = 40.3 bits (90), Expect = 0.008
 Identities = 17/32 (53%), Positives = 24/32 (75%)
 Frame = +2

Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTP 259
           I++PEK+Q KVLQ  VVAVG G++ + G+  P
Sbjct: 31  IMLPEKSQGKVLQATVVAVGSGSKGKGGEIQP 62



 Score = 31.9 bits (69), Expect = 3.0
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +3

Query: 87  AVKRLVPLLDRVLIKRAEAITKTAGGL 167
           A ++ +PL DRVL++R+ A T T GG+
Sbjct: 5   AFRKFLPLFDRVLVERSAAETVTKGGI 31


>BC023518-1|AAH23518.1|  102|Homo sapiens heat shock 10kDa protein 1
           (chaperonin 10) protein.
          Length = 102

 Score = 61.3 bits (142), Expect = 4e-09
 Identities = 31/51 (60%), Positives = 36/51 (70%)
 Frame = +1

Query: 223 SWSPKRKWRLHPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAK 375
           S S  +   + PV V VGDKVLLPEYGGTKV L  D+K+Y LFR+ DIL K
Sbjct: 51  SGSKGKGGEIQPVSVKVGDKVLLPEYGGTKVVL--DDKDYFLFRDGDILGK 99



 Score = 40.3 bits (90), Expect = 0.008
 Identities = 17/32 (53%), Positives = 24/32 (75%)
 Frame = +2

Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTP 259
           I++PEK+Q KVLQ  VVAVG G++ + G+  P
Sbjct: 31  IMLPEKSQGKVLQATVVAVGSGSKGKGGEIQP 62



 Score = 31.9 bits (69), Expect = 3.0
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +3

Query: 87  AVKRLVPLLDRVLIKRAEAITKTAGGL 167
           A ++ +PL DRVL++R+ A T T GG+
Sbjct: 5   AFRKFLPLFDRVLVERSAAETVTKGGI 31


>AJ250915-1|CAB75425.1|  102|Homo sapiens chaperonin 10, Hsp10
           protein protein.
          Length = 102

 Score = 61.3 bits (142), Expect = 4e-09
 Identities = 31/51 (60%), Positives = 36/51 (70%)
 Frame = +1

Query: 223 SWSPKRKWRLHPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAK 375
           S S  +   + PV V VGDKVLLPEYGGTKV L  D+K+Y LFR+ DIL K
Sbjct: 51  SGSKGKGGEIQPVSVKVGDKVLLPEYGGTKVVL--DDKDYFLFRDGDILGK 99



 Score = 40.3 bits (90), Expect = 0.008
 Identities = 17/32 (53%), Positives = 24/32 (75%)
 Frame = +2

Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTP 259
           I++PEK+Q KVLQ  VVAVG G++ + G+  P
Sbjct: 31  IMLPEKSQGKVLQATVVAVGSGSKGKGGEIQP 62



 Score = 31.9 bits (69), Expect = 3.0
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +3

Query: 87  AVKRLVPLLDRVLIKRAEAITKTAGGL 167
           A ++ +PL DRVL++R+ A T T GG+
Sbjct: 5   AFRKFLPLFDRVLVERSAAETVTKGGI 31


>AC020550-3|AAX93146.1|  102|Homo sapiens unknown protein.
          Length = 102

 Score = 61.3 bits (142), Expect = 4e-09
 Identities = 31/51 (60%), Positives = 36/51 (70%)
 Frame = +1

Query: 223 SWSPKRKWRLHPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAK 375
           S S  +   + PV V VGDKVLLPEYGGTKV L  D+K+Y LFR+ DIL K
Sbjct: 51  SGSKGKGGEIQPVSVKVGDKVLLPEYGGTKVVL--DDKDYFLFRDGDILGK 99



 Score = 40.3 bits (90), Expect = 0.008
 Identities = 17/32 (53%), Positives = 24/32 (75%)
 Frame = +2

Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTP 259
           I++PEK+Q KVLQ  VVAVG G++ + G+  P
Sbjct: 31  IMLPEKSQGKVLQATVVAVGSGSKGKGGEIQP 62



 Score = 31.9 bits (69), Expect = 3.0
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +3

Query: 87  AVKRLVPLLDRVLIKRAEAITKTAGGL 167
           A ++ +PL DRVL++R+ A T T GG+
Sbjct: 5   AFRKFLPLFDRVLVERSAAETVTKGGI 31


>AF109872-1|AAC96332.1|   97|Homo sapiens chaperonin 10-related
           protein protein.
          Length = 97

 Score = 59.3 bits (137), Expect = 2e-08
 Identities = 30/49 (61%), Positives = 35/49 (71%)
 Frame = +1

Query: 223 SWSPKRKWRLHPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDIL 369
           S S  +   + PV V VGDKVLLPEYGGTKV L  D+K+Y LFR+ DIL
Sbjct: 50  SGSKGKGGEIQPVSVKVGDKVLLPEYGGTKVVL--DDKDYFLFRDGDIL 96



 Score = 40.3 bits (90), Expect = 0.008
 Identities = 17/32 (53%), Positives = 24/32 (75%)
 Frame = +2

Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTP 259
           I++PEK+Q KVLQ  VVAVG G++ + G+  P
Sbjct: 30  IMLPEKSQGKVLQATVVAVGSGSKGKGGEIQP 61



 Score = 31.9 bits (69), Expect = 3.0
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +3

Query: 87  AVKRLVPLLDRVLIKRAEAITKTAGGL 167
           A ++ +PL DRVL++R+ A T T GG+
Sbjct: 4   AFRKFLPLFDRVLVERSAAETVTKGGI 30


>AF107894-1|AAC95387.1|   99|Homo sapiens chaperonin 10 protein.
          Length = 99

 Score = 58.4 bits (135), Expect = 3e-08
 Identities = 30/51 (58%), Positives = 35/51 (68%)
 Frame = +1

Query: 223 SWSPKRKWRLHPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAK 375
           S S  +   + PV V VGDKVLLPEYGGTKV L  D+K+Y LFR+  IL K
Sbjct: 50  SGSKGKGGEIQPVSVKVGDKVLLPEYGGTKVVL--DDKDYFLFRDGXILGK 98



 Score = 40.3 bits (90), Expect = 0.008
 Identities = 17/32 (53%), Positives = 24/32 (75%)
 Frame = +2

Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTP 259
           I++PEK+Q KVLQ  VVAVG G++ + G+  P
Sbjct: 30  IMLPEKSQGKVLQATVVAVGSGSKGKGGEIQP 61



 Score = 31.9 bits (69), Expect = 3.0
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +3

Query: 87  AVKRLVPLLDRVLIKRAEAITKTAGGL 167
           A ++ +PL DRVL++R+ A T T GG+
Sbjct: 4   AFRKFLPLFDRVLVERSAAETVTKGGI 30


>BC150182-1|AAI50183.1| 1192|Homo sapiens reticulon 4 protein.
          Length = 1192

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283
           +V  EKA+    +  V    P  R+E  DF PF+ VW +K
Sbjct: 359 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 397


>AY123250-1|AAM64254.1|  986|Homo sapiens RTN4 isoform G protein.
          Length = 986

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283
           +V  EKA+    +  V    P  R+E  DF PF+ VW +K
Sbjct: 153 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 191


>AY123249-1|AAM64253.1|  986|Homo sapiens RTN4 isoform F protein.
          Length = 986

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283
           +V  EKA+    +  V    P  R+E  DF PF+ VW +K
Sbjct: 153 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 191


>AY123248-1|AAM64252.1|  986|Homo sapiens RTN4 isoform E protein.
          Length = 986

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283
           +V  EKA+    +  V    P  R+E  DF PF+ VW +K
Sbjct: 153 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 191


>AY123247-1|AAM64251.1|  986|Homo sapiens RTN4 isoform D protein.
          Length = 986

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283
           +V  EKA+    +  V    P  R+E  DF PF+ VW +K
Sbjct: 153 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 191


>AY123246-1|AAM64250.1|  986|Homo sapiens RTN4 isoform Ab protein.
          Length = 986

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283
           +V  EKA+    +  V    P  R+E  DF PF+ VW +K
Sbjct: 153 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 191


>AY123245-1|AAM64249.1|  986|Homo sapiens RTN4 isoform Aa protein.
          Length = 986

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283
           +V  EKA+    +  V    P  R+E  DF PF+ VW +K
Sbjct: 153 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 191


>AY102285-4|AAM64244.1|  986|Homo sapiens RNT4 protein.
          Length = 986

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283
           +V  EKA+    +  V    P  R+E  DF PF+ VW +K
Sbjct: 153 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 191


>AY102285-1|AAM64243.1| 1192|Homo sapiens RTN4 protein.
          Length = 1192

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283
           +V  EKA+    +  V    P  R+E  DF PF+ VW +K
Sbjct: 359 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 397


>AY102279-1|AAM64248.1| 1192|Homo sapiens RTN4 isoform A protein.
          Length = 1192

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283
           +V  EKA+    +  V    P  R+E  DF PF+ VW +K
Sbjct: 359 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 397


>AJ251383-1|CAB99248.1| 1192|Homo sapiens Nogo-A protein protein.
          Length = 1192

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283
           +V  EKA+    +  V    P  R+E  DF PF+ VW +K
Sbjct: 359 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 397


>AF333336-1|AAK20831.1|  986|Homo sapiens testis specific reticulon
           5 protein protein.
          Length = 986

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283
           +V  EKA+    +  V    P  R+E  DF PF+ VW +K
Sbjct: 153 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 191


>AF320999-1|AAG40878.1|  960|Homo sapiens Nogo-A protein short form
           protein.
          Length = 960

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283
           +V  EKA+    +  V    P  R+E  DF PF+ VW +K
Sbjct: 127 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 165


>AF148537-1|AAG12176.1| 1192|Homo sapiens reticulon 4a protein.
          Length = 1192

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283
           +V  EKA+    +  V    P  R+E  DF PF+ VW +K
Sbjct: 359 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 397


>AC092461-1|AAX93116.1|  818|Homo sapiens unknown protein.
          Length = 818

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283
           +V  EKA+    +  V    P  R+E  DF PF+ VW +K
Sbjct: 173 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 211


>AB073359-1|BAE45717.1|  294|Homo sapiens NOGO-A protein.
          Length = 294

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283
           +V  EKA+    +  V    P  R+E  DF PF+ VW +K
Sbjct: 158 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 196


>AB040462-1|BAB18927.1| 1192|Homo sapiens RTN-xL protein.
          Length = 1192

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283
           +V  EKA+    +  V    P  R+E  DF PF+ VW +K
Sbjct: 359 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 397


>AB020693-1|BAA74909.2| 1233|Homo sapiens KIAA0886 protein protein.
          Length = 1233

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283
           +V  EKA+    +  V    P  R+E  DF PF+ VW +K
Sbjct: 400 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 438


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,656,964
Number of Sequences: 237096
Number of extensions: 1991068
Number of successful extensions: 3333
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 3145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3325
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10538170902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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