BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV021854 (836 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value X75821-1|CAA53455.1| 102|Homo sapiens heat shock protein 10 pro... 61 4e-09 U07550-1|AAA50953.1| 102|Homo sapiens chaperonin 10 protein. 61 4e-09 CR407688-1|CAG28616.1| 102|Homo sapiens HSPE1 protein. 61 4e-09 BC023518-1|AAH23518.1| 102|Homo sapiens heat shock 10kDa protei... 61 4e-09 AJ250915-1|CAB75425.1| 102|Homo sapiens chaperonin 10, Hsp10 pr... 61 4e-09 AC020550-3|AAX93146.1| 102|Homo sapiens unknown protein. 61 4e-09 AF109872-1|AAC96332.1| 97|Homo sapiens chaperonin 10-related p... 59 2e-08 AF107894-1|AAC95387.1| 99|Homo sapiens chaperonin 10 protein. 58 3e-08 BC150182-1|AAI50183.1| 1192|Homo sapiens reticulon 4 protein. 30 9.0 AY123250-1|AAM64254.1| 986|Homo sapiens RTN4 isoform G protein. 30 9.0 AY123249-1|AAM64253.1| 986|Homo sapiens RTN4 isoform F protein. 30 9.0 AY123248-1|AAM64252.1| 986|Homo sapiens RTN4 isoform E protein. 30 9.0 AY123247-1|AAM64251.1| 986|Homo sapiens RTN4 isoform D protein. 30 9.0 AY123246-1|AAM64250.1| 986|Homo sapiens RTN4 isoform Ab protein. 30 9.0 AY123245-1|AAM64249.1| 986|Homo sapiens RTN4 isoform Aa protein. 30 9.0 AY102285-4|AAM64244.1| 986|Homo sapiens RNT4 protein. 30 9.0 AY102285-1|AAM64243.1| 1192|Homo sapiens RTN4 protein. 30 9.0 AY102279-1|AAM64248.1| 1192|Homo sapiens RTN4 isoform A protein. 30 9.0 AJ251383-1|CAB99248.1| 1192|Homo sapiens Nogo-A protein protein. 30 9.0 AF333336-1|AAK20831.1| 986|Homo sapiens testis specific reticul... 30 9.0 AF320999-1|AAG40878.1| 960|Homo sapiens Nogo-A protein short fo... 30 9.0 AF148537-1|AAG12176.1| 1192|Homo sapiens reticulon 4a protein. 30 9.0 AC092461-1|AAX93116.1| 818|Homo sapiens unknown protein. 30 9.0 AB073359-1|BAE45717.1| 294|Homo sapiens NOGO-A protein. 30 9.0 AB040462-1|BAB18927.1| 1192|Homo sapiens RTN-xL protein. 30 9.0 AB020693-1|BAA74909.2| 1233|Homo sapiens KIAA0886 protein protein. 30 9.0 >X75821-1|CAA53455.1| 102|Homo sapiens heat shock protein 10 protein. Length = 102 Score = 61.3 bits (142), Expect = 4e-09 Identities = 31/51 (60%), Positives = 36/51 (70%) Frame = +1 Query: 223 SWSPKRKWRLHPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAK 375 S S + + PV V VGDKVLLPEYGGTKV L D+K+Y LFR+ DIL K Sbjct: 51 SGSKGKGGEIQPVSVKVGDKVLLPEYGGTKVVL--DDKDYFLFRDGDILGK 99 Score = 40.3 bits (90), Expect = 0.008 Identities = 17/32 (53%), Positives = 24/32 (75%) Frame = +2 Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTP 259 I++PEK+Q KVLQ VVAVG G++ + G+ P Sbjct: 31 IMLPEKSQGKVLQATVVAVGSGSKGKGGEIQP 62 Score = 31.9 bits (69), Expect = 3.0 Identities = 13/27 (48%), Positives = 20/27 (74%) Frame = +3 Query: 87 AVKRLVPLLDRVLIKRAEAITKTAGGL 167 A ++ +PL DRVL++R+ A T T GG+ Sbjct: 5 AFRKFLPLFDRVLVERSAAETVTKGGI 31 >U07550-1|AAA50953.1| 102|Homo sapiens chaperonin 10 protein. Length = 102 Score = 61.3 bits (142), Expect = 4e-09 Identities = 31/51 (60%), Positives = 36/51 (70%) Frame = +1 Query: 223 SWSPKRKWRLHPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAK 375 S S + + PV V VGDKVLLPEYGGTKV L D+K+Y LFR+ DIL K Sbjct: 51 SGSKGKGGEIQPVSVKVGDKVLLPEYGGTKVVL--DDKDYFLFRDGDILGK 99 Score = 40.3 bits (90), Expect = 0.008 Identities = 17/32 (53%), Positives = 24/32 (75%) Frame = +2 Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTP 259 I++PEK+Q KVLQ VVAVG G++ + G+ P Sbjct: 31 IMLPEKSQGKVLQATVVAVGSGSKGKGGEIQP 62 Score = 31.9 bits (69), Expect = 3.0 Identities = 13/27 (48%), Positives = 20/27 (74%) Frame = +3 Query: 87 AVKRLVPLLDRVLIKRAEAITKTAGGL 167 A ++ +PL DRVL++R+ A T T GG+ Sbjct: 5 AFRKFLPLFDRVLVERSAAETVTKGGI 31 >CR407688-1|CAG28616.1| 102|Homo sapiens HSPE1 protein. Length = 102 Score = 61.3 bits (142), Expect = 4e-09 Identities = 31/51 (60%), Positives = 36/51 (70%) Frame = +1 Query: 223 SWSPKRKWRLHPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAK 375 S S + + PV V VGDKVLLPEYGGTKV L D+K+Y LFR+ DIL K Sbjct: 51 SGSKGKGGEIQPVSVKVGDKVLLPEYGGTKVVL--DDKDYFLFRDGDILGK 99 Score = 40.3 bits (90), Expect = 0.008 Identities = 17/32 (53%), Positives = 24/32 (75%) Frame = +2 Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTP 259 I++PEK+Q KVLQ VVAVG G++ + G+ P Sbjct: 31 IMLPEKSQGKVLQATVVAVGSGSKGKGGEIQP 62 Score = 31.9 bits (69), Expect = 3.0 Identities = 13/27 (48%), Positives = 20/27 (74%) Frame = +3 Query: 87 AVKRLVPLLDRVLIKRAEAITKTAGGL 167 A ++ +PL DRVL++R+ A T T GG+ Sbjct: 5 AFRKFLPLFDRVLVERSAAETVTKGGI 31 >BC023518-1|AAH23518.1| 102|Homo sapiens heat shock 10kDa protein 1 (chaperonin 10) protein. Length = 102 Score = 61.3 bits (142), Expect = 4e-09 Identities = 31/51 (60%), Positives = 36/51 (70%) Frame = +1 Query: 223 SWSPKRKWRLHPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAK 375 S S + + PV V VGDKVLLPEYGGTKV L D+K+Y LFR+ DIL K Sbjct: 51 SGSKGKGGEIQPVSVKVGDKVLLPEYGGTKVVL--DDKDYFLFRDGDILGK 99 Score = 40.3 bits (90), Expect = 0.008 Identities = 17/32 (53%), Positives = 24/32 (75%) Frame = +2 Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTP 259 I++PEK+Q KVLQ VVAVG G++ + G+ P Sbjct: 31 IMLPEKSQGKVLQATVVAVGSGSKGKGGEIQP 62 Score = 31.9 bits (69), Expect = 3.0 Identities = 13/27 (48%), Positives = 20/27 (74%) Frame = +3 Query: 87 AVKRLVPLLDRVLIKRAEAITKTAGGL 167 A ++ +PL DRVL++R+ A T T GG+ Sbjct: 5 AFRKFLPLFDRVLVERSAAETVTKGGI 31 >AJ250915-1|CAB75425.1| 102|Homo sapiens chaperonin 10, Hsp10 protein protein. Length = 102 Score = 61.3 bits (142), Expect = 4e-09 Identities = 31/51 (60%), Positives = 36/51 (70%) Frame = +1 Query: 223 SWSPKRKWRLHPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAK 375 S S + + PV V VGDKVLLPEYGGTKV L D+K+Y LFR+ DIL K Sbjct: 51 SGSKGKGGEIQPVSVKVGDKVLLPEYGGTKVVL--DDKDYFLFRDGDILGK 99 Score = 40.3 bits (90), Expect = 0.008 Identities = 17/32 (53%), Positives = 24/32 (75%) Frame = +2 Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTP 259 I++PEK+Q KVLQ VVAVG G++ + G+ P Sbjct: 31 IMLPEKSQGKVLQATVVAVGSGSKGKGGEIQP 62 Score = 31.9 bits (69), Expect = 3.0 Identities = 13/27 (48%), Positives = 20/27 (74%) Frame = +3 Query: 87 AVKRLVPLLDRVLIKRAEAITKTAGGL 167 A ++ +PL DRVL++R+ A T T GG+ Sbjct: 5 AFRKFLPLFDRVLVERSAAETVTKGGI 31 >AC020550-3|AAX93146.1| 102|Homo sapiens unknown protein. Length = 102 Score = 61.3 bits (142), Expect = 4e-09 Identities = 31/51 (60%), Positives = 36/51 (70%) Frame = +1 Query: 223 SWSPKRKWRLHPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAK 375 S S + + PV V VGDKVLLPEYGGTKV L D+K+Y LFR+ DIL K Sbjct: 51 SGSKGKGGEIQPVSVKVGDKVLLPEYGGTKVVL--DDKDYFLFRDGDILGK 99 Score = 40.3 bits (90), Expect = 0.008 Identities = 17/32 (53%), Positives = 24/32 (75%) Frame = +2 Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTP 259 I++PEK+Q KVLQ VVAVG G++ + G+ P Sbjct: 31 IMLPEKSQGKVLQATVVAVGSGSKGKGGEIQP 62 Score = 31.9 bits (69), Expect = 3.0 Identities = 13/27 (48%), Positives = 20/27 (74%) Frame = +3 Query: 87 AVKRLVPLLDRVLIKRAEAITKTAGGL 167 A ++ +PL DRVL++R+ A T T GG+ Sbjct: 5 AFRKFLPLFDRVLVERSAAETVTKGGI 31 >AF109872-1|AAC96332.1| 97|Homo sapiens chaperonin 10-related protein protein. Length = 97 Score = 59.3 bits (137), Expect = 2e-08 Identities = 30/49 (61%), Positives = 35/49 (71%) Frame = +1 Query: 223 SWSPKRKWRLHPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDIL 369 S S + + PV V VGDKVLLPEYGGTKV L D+K+Y LFR+ DIL Sbjct: 50 SGSKGKGGEIQPVSVKVGDKVLLPEYGGTKVVL--DDKDYFLFRDGDIL 96 Score = 40.3 bits (90), Expect = 0.008 Identities = 17/32 (53%), Positives = 24/32 (75%) Frame = +2 Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTP 259 I++PEK+Q KVLQ VVAVG G++ + G+ P Sbjct: 30 IMLPEKSQGKVLQATVVAVGSGSKGKGGEIQP 61 Score = 31.9 bits (69), Expect = 3.0 Identities = 13/27 (48%), Positives = 20/27 (74%) Frame = +3 Query: 87 AVKRLVPLLDRVLIKRAEAITKTAGGL 167 A ++ +PL DRVL++R+ A T T GG+ Sbjct: 4 AFRKFLPLFDRVLVERSAAETVTKGGI 30 >AF107894-1|AAC95387.1| 99|Homo sapiens chaperonin 10 protein. Length = 99 Score = 58.4 bits (135), Expect = 3e-08 Identities = 30/51 (58%), Positives = 35/51 (68%) Frame = +1 Query: 223 SWSPKRKWRLHPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAK 375 S S + + PV V VGDKVLLPEYGGTKV L D+K+Y LFR+ IL K Sbjct: 50 SGSKGKGGEIQPVSVKVGDKVLLPEYGGTKVVL--DDKDYFLFRDGXILGK 98 Score = 40.3 bits (90), Expect = 0.008 Identities = 17/32 (53%), Positives = 24/32 (75%) Frame = +2 Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTP 259 I++PEK+Q KVLQ VVAVG G++ + G+ P Sbjct: 30 IMLPEKSQGKVLQATVVAVGSGSKGKGGEIQP 61 Score = 31.9 bits (69), Expect = 3.0 Identities = 13/27 (48%), Positives = 20/27 (74%) Frame = +3 Query: 87 AVKRLVPLLDRVLIKRAEAITKTAGGL 167 A ++ +PL DRVL++R+ A T T GG+ Sbjct: 4 AFRKFLPLFDRVLVERSAAETVTKGGI 30 >BC150182-1|AAI50183.1| 1192|Homo sapiens reticulon 4 protein. Length = 1192 Score = 30.3 bits (65), Expect = 9.0 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +2 Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283 +V EKA+ + V P R+E DF PF+ VW +K Sbjct: 359 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 397 >AY123250-1|AAM64254.1| 986|Homo sapiens RTN4 isoform G protein. Length = 986 Score = 30.3 bits (65), Expect = 9.0 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +2 Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283 +V EKA+ + V P R+E DF PF+ VW +K Sbjct: 153 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 191 >AY123249-1|AAM64253.1| 986|Homo sapiens RTN4 isoform F protein. Length = 986 Score = 30.3 bits (65), Expect = 9.0 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +2 Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283 +V EKA+ + V P R+E DF PF+ VW +K Sbjct: 153 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 191 >AY123248-1|AAM64252.1| 986|Homo sapiens RTN4 isoform E protein. Length = 986 Score = 30.3 bits (65), Expect = 9.0 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +2 Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283 +V EKA+ + V P R+E DF PF+ VW +K Sbjct: 153 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 191 >AY123247-1|AAM64251.1| 986|Homo sapiens RTN4 isoform D protein. Length = 986 Score = 30.3 bits (65), Expect = 9.0 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +2 Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283 +V EKA+ + V P R+E DF PF+ VW +K Sbjct: 153 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 191 >AY123246-1|AAM64250.1| 986|Homo sapiens RTN4 isoform Ab protein. Length = 986 Score = 30.3 bits (65), Expect = 9.0 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +2 Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283 +V EKA+ + V P R+E DF PF+ VW +K Sbjct: 153 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 191 >AY123245-1|AAM64249.1| 986|Homo sapiens RTN4 isoform Aa protein. Length = 986 Score = 30.3 bits (65), Expect = 9.0 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +2 Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283 +V EKA+ + V P R+E DF PF+ VW +K Sbjct: 153 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 191 >AY102285-4|AAM64244.1| 986|Homo sapiens RNT4 protein. Length = 986 Score = 30.3 bits (65), Expect = 9.0 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +2 Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283 +V EKA+ + V P R+E DF PF+ VW +K Sbjct: 153 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 191 >AY102285-1|AAM64243.1| 1192|Homo sapiens RTN4 protein. Length = 1192 Score = 30.3 bits (65), Expect = 9.0 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +2 Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283 +V EKA+ + V P R+E DF PF+ VW +K Sbjct: 359 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 397 >AY102279-1|AAM64248.1| 1192|Homo sapiens RTN4 isoform A protein. Length = 1192 Score = 30.3 bits (65), Expect = 9.0 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +2 Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283 +V EKA+ + V P R+E DF PF+ VW +K Sbjct: 359 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 397 >AJ251383-1|CAB99248.1| 1192|Homo sapiens Nogo-A protein protein. Length = 1192 Score = 30.3 bits (65), Expect = 9.0 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +2 Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283 +V EKA+ + V P R+E DF PF+ VW +K Sbjct: 359 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 397 >AF333336-1|AAK20831.1| 986|Homo sapiens testis specific reticulon 5 protein protein. Length = 986 Score = 30.3 bits (65), Expect = 9.0 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +2 Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283 +V EKA+ + V P R+E DF PF+ VW +K Sbjct: 153 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 191 >AF320999-1|AAG40878.1| 960|Homo sapiens Nogo-A protein short form protein. Length = 960 Score = 30.3 bits (65), Expect = 9.0 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +2 Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283 +V EKA+ + V P R+E DF PF+ VW +K Sbjct: 127 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 165 >AF148537-1|AAG12176.1| 1192|Homo sapiens reticulon 4a protein. Length = 1192 Score = 30.3 bits (65), Expect = 9.0 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +2 Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283 +V EKA+ + V P R+E DF PF+ VW +K Sbjct: 359 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 397 >AC092461-1|AAX93116.1| 818|Homo sapiens unknown protein. Length = 818 Score = 30.3 bits (65), Expect = 9.0 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +2 Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283 +V EKA+ + V P R+E DF PF+ VW +K Sbjct: 173 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 211 >AB073359-1|BAE45717.1| 294|Homo sapiens NOGO-A protein. Length = 294 Score = 30.3 bits (65), Expect = 9.0 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +2 Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283 +V EKA+ + V P R+E DF PF+ VW +K Sbjct: 158 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 196 >AB040462-1|BAB18927.1| 1192|Homo sapiens RTN-xL protein. Length = 1192 Score = 30.3 bits (65), Expect = 9.0 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +2 Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283 +V EKA+ + V P R+E DF PF+ VW +K Sbjct: 359 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 397 >AB020693-1|BAA74909.2| 1233|Homo sapiens KIAA0886 protein protein. Length = 1233 Score = 30.3 bits (65), Expect = 9.0 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +2 Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGDFTPFKLVWVIK 283 +V EKA+ + V P R+E DF PF+ VW +K Sbjct: 400 VVSSEKAKDSFNEKRVAVEAP-MREEYADFKPFERVWEVK 438 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 102,656,964 Number of Sequences: 237096 Number of extensions: 1991068 Number of successful extensions: 3333 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 3145 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3325 length of database: 76,859,062 effective HSP length: 89 effective length of database: 55,757,518 effective search space used: 10538170902 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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