Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021854
         (836 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070696-1|AAL48167.1|  103|Drosophila melanogaster RH34413p pro...    67   2e-11
AE014296-2229|AAF49856.1|  103|Drosophila melanogaster CG11267-P...    67   2e-11
AY075297-1|AAL68164.1|  102|Drosophila melanogaster AT30951p pro...    59   9e-09
AE014297-1794|AAF55015.1|  102|Drosophila melanogaster CG9920-PA...    59   9e-09

>AY070696-1|AAL48167.1|  103|Drosophila melanogaster RH34413p
           protein.
          Length = 103

 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 30/42 (71%), Positives = 36/42 (85%)
 Frame = +1

Query: 256 PVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAKIE 381
           P+ V  GD+VLLPE+GGTKV+LE D+KE  LFRESDILAK+E
Sbjct: 62  PIGVKEGDRVLLPEFGGTKVNLEGDQKELFLFRESDILAKLE 103



 Score = 48.4 bits (110), Expect = 1e-05
 Identities = 19/30 (63%), Positives = 28/30 (93%)
 Frame = +3

Query: 78  MANAVKRLVPLLDRVLIKRAEAITKTAGGL 167
           MA A+K+++P+LDR+LI+RAEA+TKT GG+
Sbjct: 1   MAAAIKKIIPMLDRILIQRAEALTKTKGGI 30



 Score = 39.1 bits (87), Expect = 0.007
 Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +2

Query: 164 IVIPEKAQSKVLQGEVVAVGPGARK-ENGDFTP 259
           IV+PEKA  KVL+G V+AVGPG R    G+  P
Sbjct: 30  IVLPEKAVGKVLEGTVLAVGPGTRNASTGNHIP 62


>AE014296-2229|AAF49856.1|  103|Drosophila melanogaster CG11267-PA
           protein.
          Length = 103

 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 30/42 (71%), Positives = 36/42 (85%)
 Frame = +1

Query: 256 PVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAKIE 381
           P+ V  GD+VLLPE+GGTKV+LE D+KE  LFRESDILAK+E
Sbjct: 62  PIGVKEGDRVLLPEFGGTKVNLEGDQKELFLFRESDILAKLE 103



 Score = 48.4 bits (110), Expect = 1e-05
 Identities = 19/30 (63%), Positives = 28/30 (93%)
 Frame = +3

Query: 78  MANAVKRLVPLLDRVLIKRAEAITKTAGGL 167
           MA A+K+++P+LDR+LI+RAEA+TKT GG+
Sbjct: 1   MAAAIKKIIPMLDRILIQRAEALTKTKGGI 30



 Score = 39.1 bits (87), Expect = 0.007
 Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +2

Query: 164 IVIPEKAQSKVLQGEVVAVGPGARK-ENGDFTP 259
           IV+PEKA  KVL+G V+AVGPG R    G+  P
Sbjct: 30  IVLPEKAVGKVLEGTVLAVGPGTRNASTGNHIP 62


>AY075297-1|AAL68164.1|  102|Drosophila melanogaster AT30951p
           protein.
          Length = 102

 Score = 58.8 bits (136), Expect = 9e-09
 Identities = 28/41 (68%), Positives = 35/41 (85%)
 Frame = +1

Query: 259 VQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAKIE 381
           V V  GD+VLLP+YGGTKV ++ D++EY LFRESDILAK+E
Sbjct: 63  VGVKEGDRVLLPKYGGTKVDMD-DKREYVLFRESDILAKLE 102



 Score = 41.9 bits (94), Expect = 0.001
 Identities = 16/30 (53%), Positives = 25/30 (83%)
 Frame = +3

Query: 78  MANAVKRLVPLLDRVLIKRAEAITKTAGGL 167
           M+N +K+++P+LDR+LI+R E  T TAGG+
Sbjct: 1   MSNVIKKVIPMLDRILIQRFEVKTTTAGGI 30



 Score = 35.9 bits (79), Expect = 0.069
 Identities = 16/28 (57%), Positives = 21/28 (75%)
 Frame = +2

Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENG 247
           I++PE++  K +QG VVAVGPGAR   G
Sbjct: 30  ILLPEESVPKEMQGVVVAVGPGARNPAG 57


>AE014297-1794|AAF55015.1|  102|Drosophila melanogaster CG9920-PA
           protein.
          Length = 102

 Score = 58.8 bits (136), Expect = 9e-09
 Identities = 28/41 (68%), Positives = 35/41 (85%)
 Frame = +1

Query: 259 VQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAKIE 381
           V V  GD+VLLP+YGGTKV ++ D++EY LFRESDILAK+E
Sbjct: 63  VGVKEGDRVLLPKYGGTKVDMD-DKREYVLFRESDILAKLE 102



 Score = 41.9 bits (94), Expect = 0.001
 Identities = 16/30 (53%), Positives = 25/30 (83%)
 Frame = +3

Query: 78  MANAVKRLVPLLDRVLIKRAEAITKTAGGL 167
           M+N +K+++P+LDR+LI+R E  T TAGG+
Sbjct: 1   MSNVIKKVIPMLDRILIQRFEVKTTTAGGI 30



 Score = 35.9 bits (79), Expect = 0.069
 Identities = 16/28 (57%), Positives = 21/28 (75%)
 Frame = +2

Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENG 247
           I++PE++  K +QG VVAVGPGAR   G
Sbjct: 30  ILLPEESVPKEMQGVVVAVGPGARNPAG 57


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,692,305
Number of Sequences: 53049
Number of extensions: 589632
Number of successful extensions: 1101
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1099
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3983256888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)