Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021854
         (836 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084153-5|AAK84584.1|  108|Caenorhabditis elegans Hypothetical ...    52   5e-07
Z81030-5|CAB02709.1|  324|Caenorhabditis elegans Hypothetical pr...    32   0.44 
Z77670-1|CAB01247.1|  484|Caenorhabditis elegans Hypothetical pr...    29   4.1  
U20861-10|AAA62292.1|  213|Caenorhabditis elegans Hypothetical p...    28   7.2  
Z69383-4|CAA93411.2|  326|Caenorhabditis elegans Hypothetical pr...    28   9.5  

>AC084153-5|AAK84584.1|  108|Caenorhabditis elegans Hypothetical
           protein Y22D7AL.10 protein.
          Length = 108

 Score = 52.0 bits (119), Expect = 5e-07
 Identities = 26/43 (60%), Positives = 32/43 (74%)
 Frame = +1

Query: 241 KWRLHPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDIL 369
           K  L  + V  GD+VLLPEYGGTKV +E  +KEY +FRESD+L
Sbjct: 64  KGELVALTVKPGDRVLLPEYGGTKVVVE--DKEYSIFRESDLL 104



 Score = 36.7 bits (81), Expect = 0.020
 Identities = 15/29 (51%), Positives = 21/29 (72%)
 Frame = +2

Query: 164 IVIPEKAQSKVLQGEVVAVGPGARKENGD 250
           I++PEK+Q KVL+  VV+ G G R E G+
Sbjct: 38  IMLPEKSQGKVLEATVVSAGAGLRNEKGE 66



 Score = 34.7 bits (76), Expect = 0.082
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = +3

Query: 81  ANAVKRLVPLLDRVLIKRAEAITKTAGGL 167
           +N +K   PL DRVL++R  A TKT GG+
Sbjct: 10  SNVLKTFKPLYDRVLVERVAAETKTKGGI 38


>Z81030-5|CAB02709.1|  324|Caenorhabditis elegans Hypothetical
           protein C01G10.7 protein.
          Length = 324

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 20/63 (31%), Positives = 30/63 (47%)
 Frame = +1

Query: 187 IQGFTRRSSSGRSWSPKRKWRLHPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDI 366
           + G  R+S+ G  W    K  +HP QVSV  +  LP     K  +E  ++  H + E + 
Sbjct: 236 LDGLRRQSAEGWQWGFTGKQVIHPSQVSVVQEQFLP----PKDRIEWAQELVHAYSEHEA 291

Query: 367 LAK 375
           L K
Sbjct: 292 LGK 294


>Z77670-1|CAB01247.1|  484|Caenorhabditis elegans Hypothetical
           protein W05E10.1 protein.
          Length = 484

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = -3

Query: 381 FNFRQYVRLSEEMIFFLIIFKAYFSTAVFWKK 286
           FN   Y  +S EM+ FLII     ST +FWK+
Sbjct: 434 FNSSGYTWVSVEMLTFLII--GALSTCIFWKQ 463


>U20861-10|AAA62292.1|  213|Caenorhabditis elegans Hypothetical
           protein C28H8.4 protein.
          Length = 213

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 242 NGDFTPFKLVWVIKFFFQNTAVL 310
           N DF PF+L+W    + +  A+L
Sbjct: 110 NHDFAPFELLWTFSIYLEAVAIL 132


>Z69383-4|CAA93411.2|  326|Caenorhabditis elegans Hypothetical
           protein F13E9.9 protein.
          Length = 326

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = +2

Query: 170 IPEKAQS--KVLQGEVVAVGPGARKENGDFT 256
           IPEK     K + G+  ++ PG +K+NGD T
Sbjct: 212 IPEKVVDGVKSIPGKAKSILPGGKKKNGDIT 242


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,843,595
Number of Sequences: 27780
Number of extensions: 323725
Number of successful extensions: 762
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)