Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021852X
(639 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 135 2e-32
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 132 2e-31
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 124 7e-29
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 124 7e-29
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 122 3e-28
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 122 3e-28
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 117 6e-27
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 116 1e-26
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 80 1e-15
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 77 1e-14
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 69 3e-12
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 69 3e-12
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 63 2e-10
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 54 7e-08
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 38 0.008
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 38 0.008
AC024852-5|AAO21418.1| 477|Caenorhabditis elegans Conserved oli... 30 1.6
AC024852-4|AAT81182.1| 794|Caenorhabditis elegans Conserved oli... 30 1.6
AB212858-1|BAE66673.1| 792|Caenorhabditis elegans COGC-3 protein. 30 1.6
Z81545-3|CAB04447.1| 178|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z70284-14|CAA94285.4| 422|Caenorhabditis elegans Hypothetical p... 28 6.5
Z81592-7|CAB63314.1| 436|Caenorhabditis elegans Hypothetical pr... 27 8.6
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 135 bits (327), Expect = 2e-32
Identities = 62/89 (69%), Positives = 75/89 (84%), Gaps = 1/89 (1%)
Frame = +3
Query: 243 PQQHIFDAKRLIGRKFEDATVQADMKHWPFEVVSGXG-KPKIKVAYKGEDKTFFPEEVSS 419
P +FDAKRLIGRKF+D VQ+DMKHWPF+V+S G KPK++V YKGE+K F PEE+SS
Sbjct: 63 PHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISS 122
Query: 420 MVLTKMKETAEAYLGKTVQNAVITVPACF 506
MVL KMKETAEA+LG TV++AV+TVPA F
Sbjct: 123 MVLLKMKETAEAFLGTTVKDAVVTVPAYF 151
Score = 132 bits (319), Expect = 2e-31
Identities = 61/64 (95%), Positives = 62/64 (96%)
Frame = +1
Query: 64 KHPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 243
KH AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN
Sbjct: 3 KHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 62
Query: 244 PNNT 255
P+NT
Sbjct: 63 PHNT 66
Score = 84.2 bits (199), Expect = 7e-17
Identities = 40/43 (93%), Positives = 41/43 (95%)
Frame = +2
Query: 509 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERN 637
DSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLDKKG GERN
Sbjct: 153 DSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKKGHGERN 195
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 132 bits (319), Expect = 2e-31
Identities = 61/64 (95%), Positives = 62/64 (96%)
Frame = +1
Query: 64 KHPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 243
KH AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN
Sbjct: 3 KHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 62
Query: 244 PNNT 255
P+NT
Sbjct: 63 PHNT 66
Score = 129 bits (311), Expect = 2e-30
Identities = 59/89 (66%), Positives = 73/89 (82%), Gaps = 1/89 (1%)
Frame = +3
Query: 243 PQQHIFDAKRLIGRKFEDATVQADMKHWPFEVVSGXG-KPKIKVAYKGEDKTFFPEEVSS 419
P +FDAKRLIGRKF+D VQ+DMKHWPF+V+S G KPK++V YKGE+K F PEE+SS
Sbjct: 63 PHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISS 122
Query: 420 MVLTKMKETAEAYLGKTVQNAVITVPACF 506
MVL KMK+TAEA+L TV++AV+TVP F
Sbjct: 123 MVLLKMKKTAEAFLEPTVKDAVVTVPTYF 151
Score = 84.2 bits (199), Expect = 7e-17
Identities = 40/43 (93%), Positives = 41/43 (95%)
Frame = +2
Query: 509 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERN 637
DSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLDKKG GERN
Sbjct: 153 DSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKKGHGERN 195
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 124 bits (298), Expect = 7e-29
Identities = 57/88 (64%), Positives = 70/88 (79%)
Frame = +3
Query: 243 PQQHIFDAKRLIGRKFEDATVQADMKHWPFEVVSGXGKPKIKVAYKGEDKTFFPEEVSSM 422
P+ +FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + F PEE+S+M
Sbjct: 63 PENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEISAM 122
Query: 423 VLTKMKETAEAYLGKTVQNAVITVPACF 506
VL KMKETAE YLG TV++AVITVPA F
Sbjct: 123 VLQKMKETAETYLGHTVKDAVITVPAYF 150
Score = 112 bits (270), Expect = 2e-25
Identities = 48/61 (78%), Positives = 57/61 (93%)
Frame = +1
Query: 73 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 252
A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A NP N
Sbjct: 6 AIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAARNPEN 65
Query: 253 T 255
T
Sbjct: 66 T 66
Score = 70.1 bits (164), Expect = 1e-12
Identities = 33/43 (76%), Positives = 37/43 (86%)
Frame = +2
Query: 509 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERN 637
DSQRQATKDA TI+GLN +RIINEPTAAA+AYGLDK E+N
Sbjct: 152 DSQRQATKDAATIAGLNAIRIINEPTAAALAYGLDKGIQDEKN 194
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 124 bits (298), Expect = 7e-29
Identities = 57/88 (64%), Positives = 70/88 (79%)
Frame = +3
Query: 243 PQQHIFDAKRLIGRKFEDATVQADMKHWPFEVVSGXGKPKIKVAYKGEDKTFFPEEVSSM 422
P+ +FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + F PEE+S+M
Sbjct: 63 PENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEISAM 122
Query: 423 VLTKMKETAEAYLGKTVQNAVITVPACF 506
VL KMKETAE YLG TV++AVITVPA F
Sbjct: 123 VLQKMKETAETYLGHTVKDAVITVPAYF 150
Score = 112 bits (270), Expect = 2e-25
Identities = 48/61 (78%), Positives = 57/61 (93%)
Frame = +1
Query: 73 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 252
A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A NP N
Sbjct: 6 AIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAARNPEN 65
Query: 253 T 255
T
Sbjct: 66 T 66
Score = 70.1 bits (164), Expect = 1e-12
Identities = 33/43 (76%), Positives = 37/43 (86%)
Frame = +2
Query: 509 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERN 637
DSQRQATKDA TI+GLN +RIINEPTAAA+AYGLDK E+N
Sbjct: 152 DSQRQATKDAATIAGLNAIRIINEPTAAALAYGLDKGIQDEKN 194
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 122 bits (293), Expect = 3e-28
Identities = 56/97 (57%), Positives = 71/97 (73%)
Frame = +3
Query: 243 PQQHIFDAKRLIGRKFEDATVQADMKHWPFEVVSGXGKPKIKVAYKGEDKTFFPEEVSSM 422
P+ IFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V ++K F PEEVS+M
Sbjct: 94 PENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAM 153
Query: 423 VLTKMKETAEAYLGKTVQNAVITVPACFKTLKDKPQK 533
VL KMKE AE+YLGK V+NAV+TVPA F + + K
Sbjct: 154 VLVKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATK 190
Score = 100 bits (240), Expect = 8e-22
Identities = 46/62 (74%), Positives = 55/62 (88%), Gaps = 2/62 (3%)
Frame = +1
Query: 76 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMNPN 249
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ +RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 250 NT 255
NT
Sbjct: 96 NT 97
Score = 77.4 bits (182), Expect = 8e-15
Identities = 38/43 (88%), Positives = 41/43 (95%)
Frame = +2
Query: 509 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERN 637
D+QRQATKDAGTI+GLNV+RIINEPTAAAIAYGLDKK GERN
Sbjct: 183 DAQRQATKDAGTIAGLNVVRIINEPTAAAIAYGLDKK-DGERN 224
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 122 bits (293), Expect = 3e-28
Identities = 56/97 (57%), Positives = 71/97 (73%)
Frame = +3
Query: 243 PQQHIFDAKRLIGRKFEDATVQADMKHWPFEVVSGXGKPKIKVAYKGEDKTFFPEEVSSM 422
P+ IFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V ++K F PEEVS+M
Sbjct: 94 PENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAM 153
Query: 423 VLTKMKETAEAYLGKTVQNAVITVPACFKTLKDKPQK 533
VL KMKE AE+YLGK V+NAV+TVPA F + + K
Sbjct: 154 VLVKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATK 190
Score = 102 bits (244), Expect = 2e-22
Identities = 49/72 (68%), Positives = 60/72 (83%), Gaps = 2/72 (2%)
Frame = +1
Query: 46 KNTKWQKHPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDA 219
K TK++ +GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ +RLIGDA
Sbjct: 28 KETKYET--IIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDA 85
Query: 220 AKNQVAMNPNNT 255
AKNQ+ +NP NT
Sbjct: 86 AKNQLTINPENT 97
Score = 77.4 bits (182), Expect = 8e-15
Identities = 38/43 (88%), Positives = 41/43 (95%)
Frame = +2
Query: 509 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERN 637
D+QRQATKDAGTI+GLNV+RIINEPTAAAIAYGLDKK GERN
Sbjct: 183 DAQRQATKDAGTIAGLNVVRIINEPTAAAIAYGLDKK-DGERN 224
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 117 bits (282), Expect = 6e-27
Identities = 54/88 (61%), Positives = 69/88 (78%)
Frame = +3
Query: 243 PQQHIFDAKRLIGRKFEDATVQADMKHWPFEVVSGXGKPKIKVAYKGEDKTFFPEEVSSM 422
P+ +FDAKRLIGR+F++ TVQ+D+KHWPF V GKP ++V KGE + F EE+S+M
Sbjct: 63 PENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVEVKGEKREFNAEEISAM 122
Query: 423 VLTKMKETAEAYLGKTVQNAVITVPACF 506
VL KMKETAEA LG +V++AVITVPA F
Sbjct: 123 VLQKMKETAEAVLGHSVRDAVITVPAYF 150
Score = 112 bits (270), Expect = 2e-25
Identities = 48/61 (78%), Positives = 57/61 (93%)
Frame = +1
Query: 73 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 252
A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A NP N
Sbjct: 6 AIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAARNPEN 65
Query: 253 T 255
T
Sbjct: 66 T 66
Score = 72.5 bits (170), Expect = 2e-13
Identities = 34/43 (79%), Positives = 38/43 (88%)
Frame = +2
Query: 509 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERN 637
DSQRQATKDA TI+GLN +RIINEPTAAA+AYGLDK T E+N
Sbjct: 152 DSQRQATKDAATIAGLNAIRIINEPTAAALAYGLDKGITDEKN 194
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 116 bits (280), Expect = 1e-26
Identities = 54/97 (55%), Positives = 69/97 (71%)
Frame = +3
Query: 243 PQQHIFDAKRLIGRKFEDATVQADMKHWPFEVVSGXGKPKIKVAYKGEDKTFFPEEVSSM 422
P+ IFDAKRLIGR + + TVQ D+KHWPF++V KP ++V E K F PEEVS+M
Sbjct: 91 PENTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKVGSETKQFTPEEVSAM 150
Query: 423 VLTKMKETAEAYLGKTVQNAVITVPACFKTLKDKPQK 533
VLTKMK+ AE+YLG V+NAV+TVPA F + + K
Sbjct: 151 VLTKMKQIAESYLGHEVKNAVVTVPAYFNDAQKQATK 187
Score = 103 bits (246), Expect = 1e-22
Identities = 48/62 (77%), Positives = 55/62 (88%), Gaps = 2/62 (3%)
Frame = +1
Query: 76 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMNPN 249
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAF+ ERLIGDAAKNQ+ +NP
Sbjct: 33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINPE 92
Query: 250 NT 255
NT
Sbjct: 93 NT 94
Score = 74.5 bits (175), Expect = 6e-14
Identities = 36/43 (83%), Positives = 41/43 (95%)
Frame = +2
Query: 509 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERN 637
D+Q+QATKDAG+I+GLNV+RIINEPTAAAIAYGLDKK GERN
Sbjct: 180 DAQKQATKDAGSIAGLNVVRIINEPTAAAIAYGLDKK-DGERN 221
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 80.2 bits (189), Expect = 1e-15
Identities = 40/84 (47%), Positives = 54/84 (64%)
Frame = +3
Query: 255 IFDAKRLIGRKFEDATVQADMKHWPFEVVSGXGKPKIKVAYKGEDKTFFPEEVSSMVLTK 434
+F KRLIGR++ED VQ D+K P+++V + + K + P +V + VL K
Sbjct: 95 LFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGD---AWVEAQGKVYSPSQVGAFVLMK 151
Query: 435 MKETAEAYLGKTVQNAVITVPACF 506
MKETAE+YLG TV NAV+TVPA F
Sbjct: 152 MKETAESYLGTTVNNAVVTVPAYF 175
Score = 71.3 bits (167), Expect = 5e-13
Identities = 33/36 (91%), Positives = 35/36 (97%)
Frame = +2
Query: 509 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDK 616
DSQRQATKDAG ISGLNVLR+INEPTAAA+AYGLDK
Sbjct: 177 DSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDK 212
Score = 65.3 bits (152), Expect = 3e-11
Identities = 34/65 (52%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = +1
Query: 64 KHPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 240
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 241 NPNNT 255
N NT
Sbjct: 90 NSANT 94
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 77.0 bits (181), Expect = 1e-14
Identities = 39/84 (46%), Positives = 53/84 (63%)
Frame = +3
Query: 255 IFDAKRLIGRKFEDATVQADMKHWPFEVVSGXGKPKIKVAYKGEDKTFFPEEVSSMVLTK 434
+F KRLIGR++ED VQ D+K P+++V + + K + P +V + VL K
Sbjct: 95 LFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGD---AWVEAQGKEYPPSQVGAFVLMK 151
Query: 435 MKETAEAYLGKTVQNAVITVPACF 506
MKETAE+YLG TV N V+TVPA F
Sbjct: 152 MKETAESYLGTTVNNPVVTVPAYF 175
Score = 71.3 bits (167), Expect = 5e-13
Identities = 33/36 (91%), Positives = 35/36 (97%)
Frame = +2
Query: 509 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDK 616
DSQRQATKDAG ISGLNVLR+INEPTAAA+AYGLDK
Sbjct: 177 DSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDK 212
Score = 65.3 bits (152), Expect = 3e-11
Identities = 34/65 (52%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = +1
Query: 64 KHPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 240
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 241 NPNNT 255
N NT
Sbjct: 90 NSANT 94
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 68.9 bits (161), Expect = 3e-12
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 IFDAKRLIGRKFEDATVQADMKHWPFEV-VSGXGKPKIKVAYKGEDKTFFPEEVSSMVLT 431
+FD KR+IGR+++D +Q DM WPF+V G P +++ + F VSS++L
Sbjct: 63 LFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLILR 122
Query: 432 KMKETAEAYLGKTVQNAVITVPACF 506
+K AE LG V++AVITVPA F
Sbjct: 123 CLKYNAERKLGLEVKSAVITVPAYF 147
Score = 63.3 bits (147), Expect = 1e-10
Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +1
Query: 73 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPN 249
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ + N
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 250 NTYSMPNV 273
+ + + +
Sbjct: 62 SLFDVKRI 69
Score = 52.8 bits (121), Expect = 2e-07
Identities = 25/42 (59%), Positives = 32/42 (76%)
Frame = +2
Query: 512 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERN 637
+QR+AT++A I+GL VLRI+NEPTAAAIAY L + RN
Sbjct: 150 TQRRATEEAAEIAGLKVLRILNEPTAAAIAYSLKGQRLSRRN 191
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 68.9 bits (161), Expect = 3e-12
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 IFDAKRLIGRKFEDATVQADMKHWPFEV-VSGXGKPKIKVAYKGEDKTFFPEEVSSMVLT 431
+FD KR+IGR+++D +Q DM WPF+V G P +++ + F VSS++L
Sbjct: 63 LFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLILR 122
Query: 432 KMKETAEAYLGKTVQNAVITVPACF 506
+K AE LG V++AVITVPA F
Sbjct: 123 CLKYNAERKLGLEVKSAVITVPAYF 147
Score = 63.3 bits (147), Expect = 1e-10
Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +1
Query: 73 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPN 249
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ + N
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 250 NTYSMPNV 273
+ + + +
Sbjct: 62 SLFDVKRI 69
Score = 52.8 bits (121), Expect = 2e-07
Identities = 25/42 (59%), Positives = 32/42 (76%)
Frame = +2
Query: 512 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERN 637
+QR+AT++A I+GL VLRI+NEPTAAAIAY L + RN
Sbjct: 150 TQRRATEEAAEIAGLKVLRILNEPTAAAIAYSLKGQRLSRRN 191
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Frame = +3
Query: 243 PQQHIFDAKRLIGRKFE--DATVQADMKHWPFEV-VSGXGKPKIKVAYKGEDKTFFPEEV 413
P++ I+DAKR IGR FE + +D K +PF++ + GK ++ K +PEE+
Sbjct: 95 PKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIPLDSGTKNVYPEEI 154
Query: 414 SSMVLTKMKETAEAYLGKTVQNAVITVPACF 506
S+++ +K A +LG T+ VI+ PA F
Sbjct: 155 GSLIIGYLKSAAAKHLGVTLGQVVISCPAEF 185
Score = 48.4 bits (110), Expect = 4e-06
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Frame = +1
Query: 79 GIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTER-LIGDAAKNQVAMNPN 249
GIDLGTTYS +G++ G+ I+ +D G ++ PS VAF LIG A Q NP
Sbjct: 37 GIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIGTRATEQQEHNPK 96
Query: 250 NT 255
T
Sbjct: 97 RT 98
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = +2
Query: 509 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK 619
+ QR T A I+ + V R+I+EPTAAA+AYGL KK
Sbjct: 187 EKQRNFTAKAAEIAEMEVRRVISEPTAAALAYGLHKK 223
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 54.4 bits (125), Expect = 7e-08
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Frame = +3
Query: 255 IFDAKRLIGRKFEDATVQADMKHWPFEVVSGXGKP-KIKVAYKGEDKTFFPEEVSSMVLT 431
+ + K LIGRKF D Q + P +VV ++V+Y GE TF PE+V + +LT
Sbjct: 64 VINFKHLIGRKFSDPVAQRFIPFIPCKVVKLPNDDIGVQVSYLGEPHTFTPEQVLAALLT 123
Query: 432 KMKETAEAYLG--KTVQNAVITVPACF 506
K++ E+ L K V + V+ VP+ F
Sbjct: 124 KLRTIVESQLSDVKKVSDCVLAVPSYF 150
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/60 (36%), Positives = 33/60 (55%)
Frame = +1
Query: 76 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 255
+G D+G +GV + G +E+I ND TP+ V+F +R +G AA+ V N NT
Sbjct: 4 LGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAVTTNIKNT 63
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +2
Query: 509 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERN 637
D QR+A A +GLN LRI+NE TA A+AYG+ K+ E +
Sbjct: 152 DVQRRAVLSAIQYAGLNSLRIVNETTAIALAYGIYKQDLPEED 194
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/39 (38%), Positives = 29/39 (74%)
Frame = +2
Query: 503 LQDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK 619
L ++R+A A I+GLN+L+++N+ +AAA+ YG+ ++
Sbjct: 156 LNQAERRAIASAAEIAGLNLLQLLNDGSAAALNYGVFRR 194
Score = 36.7 bits (81), Expect = 0.014
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = +3
Query: 273 LIGRKFEDATVQADMKHWPFEVVSGXGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAE 452
+I RK D K +PF + + V + +++ + E + +M+L K+ E
Sbjct: 80 MIARKEGDDAFVTFQKTFPFTAFE-FDEVRKTVVFPYKEEKYNVETLLAMILWNAKKVTE 138
Query: 453 AYLGKTVQNAVITVP 497
AY +TV++ VITVP
Sbjct: 139 AYADQTVKDVVITVP 153
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/39 (38%), Positives = 29/39 (74%)
Frame = +2
Query: 503 LQDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK 619
L ++R+A A I+GLN+L+++N+ +AAA+ YG+ ++
Sbjct: 172 LNQAERRAIASAAEIAGLNLLQLLNDGSAAALNYGVFRR 210
Score = 36.7 bits (81), Expect = 0.014
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = +3
Query: 273 LIGRKFEDATVQADMKHWPFEVVSGXGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAE 452
+I RK D K +PF + + V + +++ + E + +M+L K+ E
Sbjct: 96 MIARKEGDDAFVTFQKTFPFTAFE-FDEVRKTVVFPYKEEKYNVETLLAMILWNAKKVTE 154
Query: 453 AYLGKTVQNAVITVP 497
AY +TV++ VITVP
Sbjct: 155 AYADQTVKDVVITVP 169
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 37.5 bits (83), Expect = 0.008
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 73 AVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 249
A+ IDLGT + +G+ + G ++I N + R TP+ V D R DAA P+
Sbjct: 26 AMTIDLGTQFLKIGIVKPGIPMDIALNTESRRKTPNVVMIQDGHRTFADAAIGMQVRYPH 85
Query: 250 NTYSMPN 270
+ N
Sbjct: 86 LVHGQLN 92
Score = 35.9 bits (79), Expect = 0.024
Identities = 17/42 (40%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +2
Query: 512 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGL-DKKGTGER 634
++R A + A ++GL VL++IN+ TAAA+++G+ +K GE+
Sbjct: 175 AERLAVERAAQMAGLTVLQLINDGTAAALSHGIFRRKEIGEK 216
>AC024852-5|AAO21418.1| 477|Caenorhabditis elegans Conserved
oligomeric golgi (cog)component protein 3, isoform b
protein.
Length = 477
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 129 PVLEDTNARVRGTQIDSYCRVLLPFCIF 46
P+LE T A + GT DS CR+ C F
Sbjct: 19 PILESTLANLSGTHDDSTCRLTRDACTF 46
>AC024852-4|AAT81182.1| 794|Caenorhabditis elegans Conserved
oligomeric golgi (cog)component protein 3, isoform a
protein.
Length = 794
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 129 PVLEDTNARVRGTQIDSYCRVLLPFCIF 46
P+LE T A + GT DS CR+ C F
Sbjct: 286 PILESTLANLSGTHDDSTCRLTRDACTF 313
>AB212858-1|BAE66673.1| 792|Caenorhabditis elegans COGC-3 protein.
Length = 792
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 129 PVLEDTNARVRGTQIDSYCRVLLPFCIF 46
P+LE T A + GT DS CR+ C F
Sbjct: 286 PILESTLANLSGTHDDSTCRLTRDACTF 313
>Z81545-3|CAB04447.1| 178|Caenorhabditis elegans Hypothetical
protein F49H6.3 protein.
Length = 178
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = -2
Query: 155 WSLAMISTFPCWKTPTQEYVVPRSIPTAGCFCHFVFLISLVTCS*NNSAN 6
WS I FP W YV + FC + LI L+ S N N
Sbjct: 33 WS-GSIGLFPLWVVTIGWYVAASLVMEVSLFCTVLVLIQLIVTSNNIRRN 81
>Z70284-14|CAA94285.4| 422|Caenorhabditis elegans Hypothetical
protein K07F5.14 protein.
Length = 422
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 219 RQEPGGDEPQQHIFDAKRLIGRKFEDATVQAD 314
++ GD+P F +IGRK++D V+ D
Sbjct: 278 KERKDGDDPSTGGFSFLSMIGRKYDDEAVEDD 309
>Z81592-7|CAB63314.1| 436|Caenorhabditis elegans Hypothetical
protein T16G1.7 protein.
Length = 436
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/54 (20%), Positives = 26/54 (48%)
Frame = +1
Query: 151 DQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTYSMPNVSSDVSSKMLLCKP 312
D G+ ++V D + +IG+ + + N Y++ + S+++L +P
Sbjct: 12 DNGDGLFQTHVQLDDVQDVIGEQMNTEARLGKNTKYTVVGDGNGFMSRVILVEP 65
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,537,241
Number of Sequences: 27780
Number of extensions: 342864
Number of successful extensions: 1012
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1000
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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