Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021851
         (667 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.    169   5e-44
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   6.5  

>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.
          Length = 229

 Score =  169 bits (412), Expect = 5e-44
 Identities = 83/85 (97%), Positives = 84/85 (98%)
 Frame = +3

Query: 255 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 434
           IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 435 FAGKQLEDGRTLSDYSIQKESTLHL 509
           FAGKQLEDGRTLSDY+IQKESTLHL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score =  169 bits (412), Expect = 5e-44
 Identities = 83/85 (97%), Positives = 84/85 (98%)
 Frame = +3

Query: 255 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 434
           IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 196

Query: 435 FAGKQLEDGRTLSDYSIQKESTLHL 509
           FAGKQLEDGRTLSDY+IQKESTLHL
Sbjct: 197 FAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  138 bits (334), Expect = 1e-34
 Identities = 67/69 (97%), Positives = 68/69 (98%)
 Frame = +3

Query: 303 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYS 482
           MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 483 IQKESTLHL 509
           IQKESTLHL
Sbjct: 61  IQKESTLHL 69



 Score =  122 bits (293), Expect = 1e-29
 Identities = 59/63 (93%), Positives = 60/63 (95%)
 Frame = +1

Query: 76  MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYK 255
           MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 256 SRK 264
            +K
Sbjct: 61  IQK 63



 Score =  122 bits (293), Expect = 1e-29
 Identities = 59/63 (93%), Positives = 60/63 (95%)
 Frame = +1

Query: 76  MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYK 255
           MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136

Query: 256 SRK 264
            +K
Sbjct: 137 IQK 139



 Score =  122 bits (293), Expect = 1e-29
 Identities = 59/63 (93%), Positives = 60/63 (95%)
 Frame = +1

Query: 76  MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYK 255
           MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212

Query: 256 SRK 264
            +K
Sbjct: 213 IQK 215



 Score = 35.5 bits (78), Expect = 0.002
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = +3

Query: 255 IQKESTLHLVLRLRGG 302
           IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -1

Query: 274 RVDSFWICSRIVYGHLQAVCPQRSTA 197
           R+   W+C+   +G++  VC   S+A
Sbjct: 846 RIFCHWLCNHSTFGNIILVCIMFSSA 871


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 667,286
Number of Sequences: 2352
Number of extensions: 12121
Number of successful extensions: 34
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)