Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021850
         (747 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        26   1.4  
Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein...    25   1.9  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    24   4.3  

>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -1

Query: 132 NSSRTSRRRLQATL 91
           NSSRT+ RRLQATL
Sbjct: 350 NSSRTAIRRLQATL 363


>Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein
           protein.
          Length = 192

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -1

Query: 720 TVGFPLVRASSELTVERRSYRIVPIAHETKPTRLTARKIRGRP 592
           +VG P V    E  V+     I+P A  +KPT  T + I  +P
Sbjct: 20  SVGLPTV--DEENVVQAEQLPILPTADSSKPTDDTVKAIAPQP 60


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 393 LALRTGACRVWTGSGCCRCRVWSM 464
           +++  G   V  G+ C  C VWSM
Sbjct: 5   ISVHVGQAGVQIGNPCWDCTVWSM 28


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 820,806
Number of Sequences: 2352
Number of extensions: 17662
Number of successful extensions: 35
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)