Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021850
         (747 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical pr...    29   3.5  

>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical
           protein F16A11.3b protein.
          Length = 1364

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 274 SPRTSLTEFSRSAESIRTPPQMRCSSRSEPYLPSIG 167
           SPR     F  +   I T P+ + +S SEP  P+ G
Sbjct: 702 SPRARSVSFGTNGSPISTSPRRKANSTSEPSPPNTG 737


>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical
           protein F16A11.3a protein.
          Length = 1490

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 274 SPRTSLTEFSRSAESIRTPPQMRCSSRSEPYLPSIG 167
           SPR     F  +   I T P+ + +S SEP  P+ G
Sbjct: 828 SPRARSVSFGTNGSPISTSPRRKANSTSEPSPPNTG 863


>Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical
           protein F16A11.3c protein.
          Length = 1046

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 274 SPRTSLTEFSRSAESIRTPPQMRCSSRSEPYLPSIG 167
           SPR     F  +   I T P+ + +S SEP  P+ G
Sbjct: 828 SPRARSVSFGTNGSPISTSPRRKANSTSEPSPPNTG 863


>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical
           protein F16A11.3b protein.
          Length = 1364

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 274 SPRTSLTEFSRSAESIRTPPQMRCSSRSEPYLPSIG 167
           SPR     F  +   I T P+ + +S SEP  P+ G
Sbjct: 702 SPRARSVSFGTNGSPISTSPRRKANSTSEPSPPNTG 737


>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical
           protein F16A11.3a protein.
          Length = 1490

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 274 SPRTSLTEFSRSAESIRTPPQMRCSSRSEPYLPSIG 167
           SPR     F  +   I T P+ + +S SEP  P+ G
Sbjct: 828 SPRARSVSFGTNGSPISTSPRRKANSTSEPSPPNTG 863


>Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical
           protein F16A11.3c protein.
          Length = 1046

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 274 SPRTSLTEFSRSAESIRTPPQMRCSSRSEPYLPSIG 167
           SPR     F  +   I T P+ + +S SEP  P+ G
Sbjct: 828 SPRARSVSFGTNGSPISTSPRRKANSTSEPSPPNTG 863


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,833,372
Number of Sequences: 27780
Number of extensions: 389229
Number of successful extensions: 1187
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1187
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)