Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021848
(770 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0035 + 40637102-40637197,40638594-40638948,40639664-406397... 34 0.14
03_01_0604 + 4449416-4449766,4450150-4450374 32 0.44
01_02_0111 - 11220179-11220322,11220430-11220497,11220611-112206... 32 0.44
12_02_0997 - 25121029-25121126,25121365-25121405,25121565-251218... 31 0.77
10_06_0105 - 10790092-10790323,10791092-10791234,10791322-107914... 29 3.1
06_03_1311 - 29241884-29242054,29242802-29242879,29242968-292430... 29 3.1
01_06_0162 + 27117939-27118466,27119782-27119970,27120068-271201... 29 3.1
07_03_0167 - 14649782-14649864,14649954-14650078,14650357-146504... 29 5.4
04_03_0363 - 14942195-14942203,14942421-14943417,14944178-14944278 29 5.4
11_01_0694 - 5719188-5720400,5720439-5721194,5722004-5722247,572... 28 7.2
08_01_0553 - 4846808-4847029,4847131-4847748 28 7.2
03_04_0092 + 17255548-17256046,17257838-17258262 28 7.2
02_01_0178 - 1223725-1223736,1223900-1224025,1224404-1224649,122... 28 7.2
01_07_0167 - 41613834-41613842,41614060-41615056,41615456-416163... 28 7.2
11_01_0415 + 3160281-3160502,3162002-3162109,3163328-3163480,316... 28 9.5
09_04_0143 + 15056435-15056732,15056808-15057417,15057839-15057917 28 9.5
08_02_1198 + 25204896-25206755 28 9.5
05_06_0132 + 25893241-25893435,25894266-25894487,25894567-258948... 28 9.5
03_05_0894 + 28571015-28571391,28571651-28571768,28572069-285723... 28 9.5
02_03_0040 + 14262137-14262182,14262456-14262738,14262824-142629... 28 9.5
>01_07_0035 +
40637102-40637197,40638594-40638948,40639664-40639700,
40639850-40639955,40640086-40640196,40640334-40640468
Length = 279
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/66 (34%), Positives = 36/66 (54%)
Frame = +2
Query: 263 LRRFLYARKHDVQQSFELLVRYHQYRREHDELWASADGGVLRALADGLPGVLAQRDRRGR 442
LRRFL AR H+V+++ +L++ ++RRE + + V L D + DR GR
Sbjct: 39 LRRFLRARDHNVEKASAMLLKALRWRREAVPGGSVPEEKVQSDLDDD-KVYMGGADRTGR 97
Query: 443 CVLLVF 460
+LL F
Sbjct: 98 PILLAF 103
>03_01_0604 + 4449416-4449766,4450150-4450374
Length = 191
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 477 GDQFEANTRSTQRPRLSRCANTPGNPSASARNTPPSAEAHS 355
G +F + + R+ CAN P PS SAR PPSA S
Sbjct: 44 GGEFGRSVVEAEAERVI-CANCPHRPSRSARPPPPSANVRS 83
>01_02_0111 -
11220179-11220322,11220430-11220497,11220611-11220644,
11220735-11220766,11220900-11220959,11221276-11221729
Length = 263
Score = 32.3 bits (70), Expect = 0.44
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = -1
Query: 428 PVVPTHPATRRRALVTRPRLPKPTARHVPADIDDNEPKARNSVVRRVYARTK 273
P PTH A R L T PR P P+ H P R V R+ R +
Sbjct: 38 PRAPTHVALLPRPLYTNPRQPPPSRLHRSPPHPPPPPLRRTHVAARLVERVR 89
>12_02_0997 -
25121029-25121126,25121365-25121405,25121565-25121805,
25121884-25121946,25122719-25122852,25122904-25123006,
25123079-25123281,25123382-25123468,25123886-25124014,
25124241-25124315,25124731-25124816,25124926-25125162
Length = 498
Score = 31.5 bits (68), Expect = 0.77
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -1
Query: 362 PTARHVPADIDDNEPKARNSVVRRVY-ARTKISSKNCVLTSAF 237
P+ HV D+ D + K RN+V+ +V+ + +IS VL S F
Sbjct: 365 PSKSHVEIDVRDIDEKRRNNVIEKVHQSAIEISKNRGVLLSEF 407
>10_06_0105 -
10790092-10790323,10791092-10791234,10791322-10791429,
10791796-10791903,10793133-10797686,10798347-10798461,
10799597-10799724,10799843-10800043,10800158-10800227,
10801233-10801314,10801433-10801556,10801761-10801778
Length = 1960
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3
Query: 597 GELGPIHYNYVSVGLVLDIRQCAFNGKKQSLKTEINEHA*G 475
G L +HY ++++ LVL R F GK Q L I A G
Sbjct: 19 GGLIAVHYTFLALNLVLGARVRVFAGKSQVLMASIIHGAFG 59
>06_03_1311 -
29241884-29242054,29242802-29242879,29242968-29243049,
29243141-29243212,29243316-29243437,29243541-29243596,
29244264-29244333,29244435-29244518,29244599-29244667,
29244855-29244928,29245014-29245125,29245220-29245510
Length = 426
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 386 VTRPRLPKPTARHVPADIDDNEPKARNS-VVRRVYARTKISSKNCVLTSAFVS*GEVEAR 210
+ RP+ P+ T + P D+ + R S +R + T IS N VL F+ GE +A
Sbjct: 82 LVRPKAPEGTPQIRPLDLTKRPRRNRRSPALRAAFQETTISPANLVL-PLFIHEGEDDAP 140
Query: 209 I 207
I
Sbjct: 141 I 141
>01_06_0162 +
27117939-27118466,27119782-27119970,27120068-27120159,
27121126-27121185,27121302-27121392,27121679-27121882,
27121937-27122338
Length = 521
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = -3
Query: 606 LFEGELGPIHYNYVSVGLV-LDIRQCAFNGKKQSLKTEINEHA*GDQFEANTRSTQRPRL 430
LF G L + + + VG++ L ++ N K + K E+ + Q EA R L
Sbjct: 441 LFAGLLFFVGFVLIGVGILYLGLQNPVTNEKVKVRKLELQDLVSAFQHEAEQHGKVREGL 500
Query: 429 SRCANTPGNPSAS 391
SR +++P + SAS
Sbjct: 501 SRHSSSPKSSSAS 513
>07_03_0167 -
14649782-14649864,14649954-14650078,14650357-14650400,
14650873-14651003,14652469-14652559,14653335-14653445,
14653623-14653774,14653863-14654067,14654436-14654764,
14654850-14655309
Length = 576
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -3
Query: 432 LSRCANTPGN-PSASARNTPPSAEAHSSSCS 343
L+ C T G+ PS S+ T P+A+ H+ SC+
Sbjct: 74 LTPCLETIGDVPSTSSLQTEPAADHHARSCT 104
>04_03_0363 - 14942195-14942203,14942421-14943417,14944178-14944278
Length = 368
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +3
Query: 123 NERLCEVTRKRLTDGDRQRALLGLKEAVDSSLNLALRDKSRCQDTI 260
+ R+C +T K + LLG + +DS+L+L + D ++ Q +I
Sbjct: 277 SRRICNMTSKASKSKETYEYLLGEIDNLDSNLDLIIEDAAQNQASI 322
>11_01_0694 -
5719188-5720400,5720439-5721194,5722004-5722247,
5723862-5723901
Length = 750
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 183 LLGLKEAVDSSLNLALRDKSRCQDTIF*GDFCTRVNTTYNRVSSF 317
L+GL E + S NL + +RC D +F + ++ +S+F
Sbjct: 129 LIGLPEVIGSLTNLKYLNLARCMDYVFGSPSTDQTDSFIGSISTF 173
>08_01_0553 - 4846808-4847029,4847131-4847748
Length = 279
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 356 LWASADGGVLRALADGLPGVLAQRDRRGRCVL 451
L++S GGV RA G P L +DR G L
Sbjct: 131 LYSSNGGGVARAHGHGAPAPLLDKDRAGELPL 162
>03_04_0092 + 17255548-17256046,17257838-17258262
Length = 307
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 66 TKPVMNEYAEYDWKLHQMQNERLCEVTRKRL 158
T + E E W+ +MQN R E RKRL
Sbjct: 89 TSSLPTETEEERWRRREMQNRRRLEARRKRL 119
>02_01_0178 -
1223725-1223736,1223900-1224025,1224404-1224649,
1224731-1224922,1225059-1225138,1225233-1226826
Length = 749
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 467 SRRTRGAHNARVYPVVPTHPATRRRALVTRPRLPKPT 357
S R AH A + P++P HP L T P L P+
Sbjct: 66 SLRLSSAHVALLLPLLPLHPRLVSPLLATSPHLLPPS 102
>01_07_0167 -
41613834-41613842,41614060-41615056,41615456-41616336,
41616437-41616508,41616590-41616649,41616736-41616885,
41616974-41617021,41617107-41617181,41617266-41617411,
41617514-41617594,41617703-41617810,41618046-41618057,
41618137-41618148,41618499-41618546,41619021-41619105
Length = 927
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 123 NERLCEVTRKRLTDGDRQRALLGLKEAVDSSLNLALRDKSRCQDTI 260
+ R+C + K + LLG + +DS+L+L + D ++ Q TI
Sbjct: 836 SRRICNMASKASKSKETYEYLLGEIDNLDSNLDLIIEDAAQNQATI 881
>11_01_0415 +
3160281-3160502,3162002-3162109,3163328-3163480,
3163568-3163919,3175051-3175607
Length = 463
Score = 27.9 bits (59), Expect = 9.5
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = -1
Query: 446 HNARVYPVVPTH--PATRRRALVTRPRLPKPTARHVPADIDDNEPKARNSVVRRVYARTK 273
+N+ + V T PA A++T + T + V D + N+P A V+ R+ R+K
Sbjct: 317 YNSTIIETVNTGYGPAEVSYAVLTNAVEGQVTVKLVRRD-EHNDPTAITGVLGRIITRSK 375
Query: 272 ISSKNCVL 249
+ + CVL
Sbjct: 376 LLNVGCVL 383
>09_04_0143 + 15056435-15056732,15056808-15057417,15057839-15057917
Length = 328
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +3
Query: 339 GGNMTSCGLRQTGACYERSPTGCRVCWHNGID 434
GG+ + C+ CRV WH+GID
Sbjct: 222 GGDAEEIAETECPHCHRMFCASCRVPWHDGID 253
>08_02_1198 + 25204896-25206755
Length = 619
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -1
Query: 479 EETSSRRTRGAHNARVYPVVPTHPATRRRALVTRP 375
E TSSR RG H+ + V+P++ T RP
Sbjct: 349 EHTSSRHNRGRHDQQPNQVLPSNEGTNESRKRKRP 383
>05_06_0132 +
25893241-25893435,25894266-25894487,25894567-25894863,
25894944-25895111,25895201-25895368,25895456-25895536,
25895704-25895770,25895874-25895971,25896587-25896659,
25896753-25896823,25896919-25896968,25897698-25897810,
25898182-25898300,25898629-25898721,25899025-25899051,
25899422-25899823,25900467-25900513,25900612-25900651,
25900733-25900795,25900881-25901018,25901873-25902031,
25902111-25902164,25902324-25902392,25902514-25902643,
25902909-25902949,25903133-25903178,25903200-25903357,
25903560-25903605,25903702-25903853,25904022-25904243
Length = 1202
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +2
Query: 185 FGPKRGGGFEPQPRPTRQ-KPMSRHNFLRRF 274
+GP+RGG RPT Q P+ RH F F
Sbjct: 11 YGPRRGGCESSSSRPTLQPAPILRHPFAGGF 41
>03_05_0894 +
28571015-28571391,28571651-28571768,28572069-28572376,
28572452-28572583,28572672-28572770,28572950-28573487
Length = 523
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 399 TGCRVCWHNGIDAGVVCSSCSPRTG 473
+G R+ H G+D G VCS C+ R G
Sbjct: 151 SGKRLRAHVGLDEGEVCSQCNLRGG 175
>02_03_0040 +
14262137-14262182,14262456-14262738,14262824-14262923,
14263027-14263293,14263378-14263455,14263552-14263653,
14263731-14263780,14263864-14263957,14264060-14264161,
14264855-14264960,14265056-14265414,14265572-14265646,
14265890-14265907
Length = 559
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 254 HNFLRRFLYARKHDVQQSFELLVRYHQYRRE 346
++ + RFL ARK DV+++ ++ V Q+R+E
Sbjct: 105 YHMMLRFLKARKFDVEKAKQMWVDMLQWRKE 135
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,139,175
Number of Sequences: 37544
Number of extensions: 473298
Number of successful extensions: 1666
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1665
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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