Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021848
(770 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14362| Best HMM Match : CRAL_TRIO_N (HMM E-Value=0.065) 45 8e-05
SB_38788| Best HMM Match : rve (HMM E-Value=4e-06) 32 0.45
SB_970| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_3221| Best HMM Match : rve (HMM E-Value=3) 30 2.4
SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_5914| Best HMM Match : 7tm_1 (HMM E-Value=4.5e-18) 29 3.1
SB_36932| Best HMM Match : HTH_8 (HMM E-Value=1.4) 29 4.2
SB_50147| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_31262| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_18605| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_44562| Best HMM Match : 7tm_1 (HMM E-Value=9e-12) 28 7.3
SB_42413| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_40685| Best HMM Match : NPIP (HMM E-Value=1.8) 28 9.6
SB_58956| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_9823| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_688| Best HMM Match : DMAP_binding (HMM E-Value=0.02) 28 9.6
>SB_14362| Best HMM Match : CRAL_TRIO_N (HMM E-Value=0.065)
Length = 215
Score = 44.8 bits (101), Expect = 8e-05
Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Frame = +2
Query: 263 LRRFLYARKHDVQQSFELLVRYHQYRREHDELWASADGGVLR-ALADGLPGVLAQRDRRG 439
L R+L AR H+V +F LL + ++ + + EL + LR L DG P VL D G
Sbjct: 79 LLRYLRARGHNVVAAFALLCSHIEFHKNNPELLKGLNAFELRYILEDGFPCVLPYMDPVG 138
Query: 440 RCVLLVFASNWSPQACSLISVFRLCFLPLNAHWRISRTKPTDT*L*WIGPSSPSNNRAVY 619
++++F W S ++ + L L H S T + + + S ++ +A Y
Sbjct: 139 STIMVLFPGMWDTDTFSPDTLLQALMLTL-MHLSESLTVQSRGVVLLVDFSEWTSTQAAY 197
Query: 620 -KLRY*K**LTVYKI 661
++Y K +T++++
Sbjct: 198 LNIKYIKKIVTIFEV 212
>SB_38788| Best HMM Match : rve (HMM E-Value=4e-06)
Length = 956
Score = 32.3 bits (70), Expect = 0.45
Identities = 21/70 (30%), Positives = 27/70 (38%)
Frame = -1
Query: 380 RPRLPKPTARHVPADIDDNEPKARNSVVRRVYARTKISSKNCVLTSAFVS*GEVEARIHR 201
R RLP P P +ID ++ KA+ R Y R+ + A GEV R
Sbjct: 853 RTRLPAPPEAMQPTEIDKDKMKAKEEAYREAYIRSYNLRHRVISLPALEEVGEVYVRDQG 912
Query: 200 LF*AQKRPLS 171
F P S
Sbjct: 913 RFGEVSNPRS 922
>SB_970| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 75 VMNEYAEYDWKLHQMQNERLCEVTRKRLTDGDRQRALLGLKE 200
+M E + + Q +R+CE+ R+ TD DR +A LK+
Sbjct: 257 LMYEIKRFSDESFQGDRKRICELLRELATDSDRHKAKKDLKQ 298
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -3
Query: 450 STQRPRLSRCAN-TPGNPSASARNTPPSAEAHSSSCS 343
+T+ P+ SR ++ +P NP+ S R T P+A HS S S
Sbjct: 568 NTKPPKTSRTSSPSPDNPNRS-RRTSPNARRHSGSSS 603
>SB_3221| Best HMM Match : rve (HMM E-Value=3)
Length = 324
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 380 RPRLPKPTARHVPADIDDNEPKARNSVVRRVYART 276
R RLP P P +ID + KA+ R Y R+
Sbjct: 199 RTRLPAPPEAMQPTEIDKEKMKAKEEAYREAYTRS 233
>SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1716
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +2
Query: 350 DELWASADGGVLRALADGLPGVL--AQRDRRGRCVLLVFASNWS 475
DELW + + L+AL GLPG L R+ C ++ A S
Sbjct: 1274 DELWEAIEHASLKALVAGLPGKLYYEVREEFRNCTVITIAHRLS 1317
>SB_5914| Best HMM Match : 7tm_1 (HMM E-Value=4.5e-18)
Length = 327
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 461 ASNWSPQA-CSLISVFRLCFLPLNAHWRISRTK 556
A +WS +A CS+I+ C P+ WRIS +
Sbjct: 254 AKSWSAEALCSVIAFTNACMNPVILFWRISEIR 286
>SB_36932| Best HMM Match : HTH_8 (HMM E-Value=1.4)
Length = 721
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -1
Query: 470 SSRRTRGAHNARVYPVVPTHPATRRRA---LVTRPRLPKPTARHVPADIDDNEPKA 312
SSR TR +V P +PT PA + LV PR K R D+++ KA
Sbjct: 125 SSRMTRKRAKDKVSPSLPTSPAKKAEVLENLVNSPRTKKILERKNVLRTDEDKKKA 180
>SB_50147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/60 (31%), Positives = 23/60 (38%)
Frame = +3
Query: 150 KRLTDGDRQRALLGLKEAVDSSLNLALRDKSRCQDTIF*GDFCTRVNTTYNRVSSFWFVI 329
KR + D R LKE S +RDK R D D T V+S W V+
Sbjct: 511 KRSLESDISRKRRSLKEGPPSQYRTLIRDKRRLSDDGLDRDEGTTTGVDAAEVASVWDVV 570
>SB_31262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = -3
Query: 456 TRSTQRPRLSRCANTPGNPSASARNTPPSAEAHSSSCSRR 337
+RST R R A TP PS + + PS SS S R
Sbjct: 205 SRSTPRSRSRSRARTPSTPSTPSTPSTPSTITTSSRASSR 244
>SB_18605| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1400
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +2
Query: 245 MSRHNFLRRFLYARKHDVQQSFELLVRYHQYRREHDELWASADGGVLRAL 394
++R N L L+ KH V + + R HQ ++E D A + + R L
Sbjct: 182 LNRQNKLYDALFEEKHSVSTELDKVSRLHQQQKEKDTQLAQRNKELQREL 231
>SB_44562| Best HMM Match : 7tm_1 (HMM E-Value=9e-12)
Length = 276
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +2
Query: 461 ASNWSPQA-CSLISVFRLCFLPLNAHWRI 544
A +WS +A CS+I+ C PL WRI
Sbjct: 203 AKSWSAEALCSVIAFTNACVNPLILFWRI 231
>SB_42413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = -3
Query: 519 KKQSLKTEINEHA*GDQFEANTRSTQRPRLSRCAN-TPGNPSASARNTPPSAEAHSSSC 346
K ++ ++NEH GD + R+ + + T S S +NTP SC
Sbjct: 351 KNENEHNKLNEHCEGDSHNEGKMDKENERIEQKEDATKSGASGSHQNTPSHIHGFKPSC 409
>SB_40685| Best HMM Match : NPIP (HMM E-Value=1.8)
Length = 672
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -1
Query: 449 AHNAR--VYPVVPTHPATRRRALVTRPRLPKP 360
A+NAR +YP VPT+P T R + + L P
Sbjct: 379 ANNARDFLYPAVPTYPGTGRELTLFKTSLFNP 410
>SB_58956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 679
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 227 PTRQKPMSRHNFLRRFLYARKHDVQQSFELLVRYHQYR 340
P P++ L+ F AR+ +V Q++EL +Y+Q R
Sbjct: 463 PEEPPPIADSTMLKHF--AREAEVNQNYELAAKYYQER 498
>SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2208
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +3
Query: 24 NTRFNCERPHDSYLTKPVMNEYAEYDWKLHQMQNERLCEVT--RKRLTDGDRQRALLGLK 197
N + + + D+ + +++ +E+D KLHQ+Q + + +V R+ D + A L K
Sbjct: 1846 NKQMSESQRKDAERIEQIIHNKSEFDRKLHQLQCQHMEQVEGHEGRIRDLKTKLATLENK 1905
Query: 198 EAV 206
EAV
Sbjct: 1906 EAV 1908
>SB_9823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1329
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 188 QKRPLSVTVCESFSSHFTEP 129
Q RP S T C F +FTEP
Sbjct: 544 QSRPTSPTECRKFPPYFTEP 563
>SB_688| Best HMM Match : DMAP_binding (HMM E-Value=0.02)
Length = 84
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 188 QKRPLSVTVCESFSSHFTEP 129
Q RP S T C F +FTEP
Sbjct: 8 QSRPTSPTECRKFPPYFTEP 27
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,799,902
Number of Sequences: 59808
Number of extensions: 564263
Number of successful extensions: 3675
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3669
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2095976575
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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