Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021848
         (770 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    26   1.5  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   4.5  
AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          23   7.9  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          23   7.9  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          23   7.9  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          23   7.9  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   7.9  

>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -3

Query: 660 IL*TVNHHFQYLSL*TARLFEGELGPIHYNYV-SVGL 553
           IL T++H   YL L    L   EL  + YN V ++GL
Sbjct: 699 ILSTISHTASYLRLWALSLAHAELSEVLYNMVFTIGL 735


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 170 VTVCESFSSHFTEPF 126
           V +CE FS+HF++ F
Sbjct: 427 VEICELFSAHFSQMF 441


>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 176 TGAFGPKRGGGFEPQPRPTRQKPMSRHN 259
           TG  G   GGG   QP    ++ + +HN
Sbjct: 254 TGGTGTSSGGGGSFQPPTLTEELLCKHN 281


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 176 TGAFGPKRGGGFEPQPRPTRQKPMSRHN 259
           TG  G   GGG   QP    ++ + +HN
Sbjct: 254 TGGTGTSSGGGGSFQPPTLTEELLCKHN 281


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 176 TGAFGPKRGGGFEPQPRPTRQKPMSRHN 259
           TG  G   GGG   QP    ++ + +HN
Sbjct: 254 TGGTGTSSGGGGSFQPPTLTEELLCKHN 281


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 176 TGAFGPKRGGGFEPQPRPTRQKPMSRHN 259
           TG  G   GGG   QP    ++ + +HN
Sbjct: 254 TGGTGTSSGGGGSFQPPTLTEELLCKHN 281


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 7/27 (25%), Positives = 19/27 (70%)
 Frame = +2

Query: 329 HQYRREHDELWASADGGVLRALADGLP 409
           H Y ++ + ++ +++G V+R++  G+P
Sbjct: 601 HSYFQDRELVYETSEGPVVRSVTAGVP 627


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 823,108
Number of Sequences: 2352
Number of extensions: 17873
Number of successful extensions: 50
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)