Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021848
(770 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF078785-4|AAC27089.3| 609|Caenorhabditis elegans Hypothetical ... 31 0.69
AL110485-34|CAB60348.3| 397|Caenorhabditis elegans Hypothetical... 29 2.8
AL110484-29|CAE48674.1| 397|Caenorhabditis elegans Hypothetical... 29 2.8
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p... 29 3.7
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z83116-2|CAB05560.1| 320|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z81132-10|CAB03433.1| 320|Caenorhabditis elegans Hypothetical p... 29 4.8
Z81112-4|CAB03275.1| 317|Caenorhabditis elegans Hypothetical pr... 28 6.4
U61944-3|AAB03119.1| 818|Caenorhabditis elegans Hypothetical pr... 28 6.4
U21323-12|AAA62554.2| 354|Caenorhabditis elegans Hypothetical p... 28 6.4
AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical ... 28 8.5
AC006696-7|AAF39988.1| 140|Caenorhabditis elegans Hypothetical ... 28 8.5
AC006696-6|AAF39986.1| 141|Caenorhabditis elegans Hypothetical ... 28 8.5
AC006696-5|AAF39987.1| 141|Caenorhabditis elegans Hypothetical ... 28 8.5
>AF078785-4|AAC27089.3| 609|Caenorhabditis elegans Hypothetical
protein C04E12.4 protein.
Length = 609
Score = 31.5 bits (68), Expect = 0.69
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +3
Query: 24 NTRFNCERPHDSYLTKPVMNEYAEYDWKLHQMQNERLCEVTRKRL 158
N + E+P+D+YL K NE WK + E++ E R+
Sbjct: 115 NVERHSEKPYDAYLHKKDKNEEGSIYWKFNLKSTEKILEKLEIRM 159
>AL110485-34|CAB60348.3| 397|Caenorhabditis elegans Hypothetical
protein Y46G5A.2 protein.
Length = 397
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 21 ANTRFNCERPHDSYLTKPVMNEYAEYDWKLHQMQNERLCEVTRKR 155
A F+ + PH + L+ + +Y++ +++ + NERLC VT R
Sbjct: 250 ATILFSWQFPHFNGLSWNLRGDYSKAGYRVMCVTNERLCRVTSLR 294
>AL110484-29|CAE48674.1| 397|Caenorhabditis elegans Hypothetical
protein Y46G5A.2 protein.
Length = 397
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 21 ANTRFNCERPHDSYLTKPVMNEYAEYDWKLHQMQNERLCEVTRKR 155
A F+ + PH + L+ + +Y++ +++ + NERLC VT R
Sbjct: 250 ATILFSWQFPHFNGLSWNLRGDYSKAGYRVMCVTNERLCRVTSLR 294
>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 215 PQPRPTRQKPMSRHNFLRRFLYARKHD 295
P+P+P R K +SR R FL +HD
Sbjct: 892 PKPKPGRGKKVSRGLITREFLLGMRHD 918
>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 215 PQPRPTRQKPMSRHNFLRRFLYARKHD 295
P+P+P R K +SR R FL +HD
Sbjct: 892 PKPKPGRGKKVSRGLITREFLLGMRHD 918
>Z83116-2|CAB05560.1| 320|Caenorhabditis elegans Hypothetical
protein M01B2.2 protein.
Length = 320
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 476 PQACSLISVFRLCFLPLNAHWRIS 547
P AC + +F LCFL N W IS
Sbjct: 81 PTACYIGHMFMLCFLECNLIWMIS 104
>Z81132-10|CAB03433.1| 320|Caenorhabditis elegans Hypothetical
protein T26E4.12 protein.
Length = 320
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 476 PQACSLISVFRLCFLPLNAHWRIS 547
P AC + +F LCFL N W IS
Sbjct: 81 PTACYIGHMFMLCFLECNLIWMIS 104
>Z81112-4|CAB03275.1| 317|Caenorhabditis elegans Hypothetical
protein T02B5.4 protein.
Length = 317
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 476 PQACSLISVFRLCFLPLNAHWRIS 547
P AC + +F LCFL N W IS
Sbjct: 81 PTACYVGHMFMLCFLECNLIWMIS 104
>U61944-3|AAB03119.1| 818|Caenorhabditis elegans Hypothetical
protein T12E12.3 protein.
Length = 818
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = -1
Query: 431 YPVVPTHPATRRRALVTRPRLPKPTARHVP----ADIDDNEPKARNSVVRRVYARTKISS 264
+ +VP PA R + L RPR P P A +D+ +P + VV +++SS
Sbjct: 267 WDIVPDQPAPRSKILPWRPRTPAGHRDRSPSSPMAHLDNIQPPSPIQVVSNPTLSSELSS 326
Query: 263 K 261
+
Sbjct: 327 R 327
>U21323-12|AAA62554.2| 354|Caenorhabditis elegans Hypothetical
protein C45G9.11 protein.
Length = 354
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3
Query: 651 TVNHHFQYLSL*TARLFEGELGPIHYNYVSVGLVLDIRQC 532
TVNHH+Q + L R+ ++ PIH S L L+ C
Sbjct: 152 TVNHHYQKVVLFRNRMKANKVAPIHTKVQSRHLELEPLCC 191
>AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical
protein W09B6.1a protein.
Length = 2054
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 314 ARNSVVRRVYARTKISSKNCVL 249
+R VVR +Y+ T+I SKN V+
Sbjct: 862 SRKDVVRTIYSHTQIKSKNIVM 883
>AC006696-7|AAF39988.1| 140|Caenorhabditis elegans Hypothetical
protein W08E12.3 protein.
Length = 140
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3
Query: 333 NIGGNMTSCGLRQTGACYERSPTGCRVCWHNGIDAGVVCSSCSPR 467
N G N +CG + T + GC NG +C+SC P+
Sbjct: 49 NCGCNGNNCGPQVTVVQVPNNNNGCSCSPCNGPVCAPMCNSCPPQ 93
>AC006696-6|AAF39986.1| 141|Caenorhabditis elegans Hypothetical
protein W08E12.4 protein.
Length = 141
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3
Query: 333 NIGGNMTSCGLRQTGACYERSPTGCRVCWHNGIDAGVVCSSCSPR 467
N G N +CG + T + GC NG +C+SC P+
Sbjct: 49 NCGCNGNNCGPQVTVVQVPNNNNGCSCSPCNGPICAPMCNSCPPQ 93
>AC006696-5|AAF39987.1| 141|Caenorhabditis elegans Hypothetical
protein W08E12.5 protein.
Length = 141
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3
Query: 333 NIGGNMTSCGLRQTGACYERSPTGCRVCWHNGIDAGVVCSSCSPR 467
N G N +CG + T + GC NG +C+SC P+
Sbjct: 49 NCGCNGNNCGPQVTVVQVPNNNNGCSCSPCNGPICAPMCNSCPPQ 93
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,959,094
Number of Sequences: 27780
Number of extensions: 403434
Number of successful extensions: 1287
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1286
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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