Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021847
         (806 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   3.6  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    24   4.8  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   8.4  
AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.    23   8.4  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +1

Query: 316  WCSWISNPRRWLSSHPALCDVYTNIDGARNSRTTS 420
            W + +    RWL+  P  C V    +G + +  TS
Sbjct: 1371 WLATVVPCDRWLTGSPFFCSVRLIAEGQKRTLATS 1405


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -2

Query: 802 LGILTCSNPKNPLSFHSYQVSHRFRRLLYL 713
           LGIL  +N +  +S +   + H FR+L++L
Sbjct: 747 LGILFTNNVREAMSLNWDLLIHHFRQLVWL 776


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 9/37 (24%), Positives = 21/37 (56%)
 Frame = +3

Query: 180 QVPSEYLSHKEKYELAIKKASLMFKYSENGKRRRTQE 290
           Q   +Y   KE++E+ ++  + ++   EN  +RR ++
Sbjct: 516 QATIKYYPSKERWEMTMEDRTFVYGAWENLSKRREED 552


>AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.
          Length = 115

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -3

Query: 447 TLNALPIQYACCSTVPC 397
           T   LP  YAC  T PC
Sbjct: 71  TREPLPYMYACPGTEPC 87


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 927,355
Number of Sequences: 2352
Number of extensions: 20475
Number of successful extensions: 28
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85239615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)