Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021847
         (806 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    24   1.9  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    24   1.9  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    23   3.3  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   5.8  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   7.7  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   7.7  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +1

Query: 709 LPGIKVGEIGAKLGMNGTIMDSWD 780
           LPG+ V   G ++GM+ T + SW+
Sbjct: 371 LPGVAVNYYGDEIGMSDTYI-SWE 393


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +1

Query: 709 LPGIKVGEIGAKLGMNGTIMDSWD 780
           LPG+ V   G ++GM+ T + SW+
Sbjct: 371 LPGVAVNYYGDEIGMSDTYI-SWE 393


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 366 CRVRGEPSSRIADPRAP 316
           CR+ G P++  A P+ P
Sbjct: 442 CRIHGSPATTAAPPQLP 458


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 338 LEDGSPLTLHYVMFIPTLMGQGTVEQQAYW 427
           ++DG PLTL YV    ++ G   +     W
Sbjct: 80  IQDGVPLTLGYVTREVSIDGNPLIAPYPNW 109


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +3

Query: 669 LHRSVTRRRDSYAFARYKSRRNRCETW 749
           L R +   R  Y F++Y   + + E W
Sbjct: 137 LDRVLESPRGKYEFSKYDKLKKKLEEW 163


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +3

Query: 669 LHRSVTRRRDSYAFARYKSRRNRCETW 749
           L R +   R  Y F++Y   + + E W
Sbjct: 152 LDRVLESPRGKYEFSKYDKLKKKLEEW 178


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 252,362
Number of Sequences: 438
Number of extensions: 5502
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25610547
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)