Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021844
         (730 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.27 
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    23   1.9  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   1.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.9  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   4.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   4.4  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   4.4  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   4.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 126  WLTTPSPWWSRST 164
            W T PS WWS +T
Sbjct: 1035 WTTKPSTWWSSTT 1047



 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -2

Query: 354 RRPDAGHHHALQPRPG 307
           R P A HH  L  RPG
Sbjct: 371 REPVADHHANLYSRPG 386


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
 Frame = -3

Query: 407 VICSAVCRPSCCS----RALRGAALMPATTTRSSHA 312
           VI   +C P C S    +AL   ++M   TTRS+ A
Sbjct: 220 VIGCVLCSPGCFSLFRGKALMDKSVMKKYTTRSTQA 255


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
 Frame = -3

Query: 407 VICSAVCRPSCCS----RALRGAALMPATTTRSSHA 312
           VI   +C P C S    +AL   ++M   TTRS+ A
Sbjct: 534 VIGCVLCSPGCFSLFRGKALMDKSVMKKYTTRSTQA 569


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
 Frame = -3

Query: 407 VICSAVCRPSCCS----RALRGAALMPATTTRSSHA 312
           VI   +C P C S    +AL   ++M   TTRS+ A
Sbjct: 767 VIGCVLCSPGCFSLFRGKALMDKSVMKKYTTRSTQA 802


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
 Frame = -3

Query: 407 VICSAVCRPSCCS----RALRGAALMPATTTRSSHA 312
           VI   +C P C S    +AL   ++M   TTRS+ A
Sbjct: 767 VIGCVLCSPGCFSLFRGKALMDKSVMKKYTTRSTQA 802


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
          transcription factor Labialprotein.
          Length = 353

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 13 AQRTPHHAAGHHLQDP 60
          AQ+ P H + +H +DP
Sbjct: 32 AQQMPPHYSNYHYEDP 47


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -3

Query: 371 SRALRGAALMPATTTRSSHAPVGY 300
           S  L GA     TT  + H P GY
Sbjct: 68  SPCLNGATCQDHTTHYTCHCPYGY 91


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
          protein.
          Length = 210

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 13 AQRTPHHAAGHHLQDP 60
          AQ+ P H + +H +DP
Sbjct: 32 AQQMPPHYSNYHYEDP 47


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
          protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 13 AQRTPHHAAGHHLQDP 60
          AQ+ P H + +H +DP
Sbjct: 32 AQQMPPHYSNYHYEDP 47


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,187
Number of Sequences: 336
Number of extensions: 2763
Number of successful extensions: 22
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)