Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021842
         (841 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    27   0.14 
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    26   0.43 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    24   1.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.3  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   5.3  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   7.0  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   7.0  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   7.0  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   7.0  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   9.2  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   9.2  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   9.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.2  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 27.5 bits (58), Expect = 0.14
 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
 Frame = +2

Query: 542 QVKRLVSKAKTTEASPTRYSQRKSAYVPNDRTRQGRDSNR-SGTPQITEIDIFG-GEPLG 715
           ++ R     K    + TR+S   S  +P +RT +  D+NR +G   ++E +  G G P  
Sbjct: 525 ELDRFAVSLKQGTNTITRHSTESSLTIPFERTFRNLDANRPTGGDALSEFNFCGCGWPQH 584

Query: 716 IF--KTTEPNYGTKLDV 760
           +   K TE  Y   L V
Sbjct: 585 MLLPKGTEAGYPCHLFV 601


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 25.8 bits (54), Expect = 0.43
 Identities = 18/66 (27%), Positives = 28/66 (42%)
 Frame = +3

Query: 642 KEETVTEVVLHKSQKLIYLVVSHLVYSRQQNQTMEQNWMFGEPKETRAKFSNCTASGQLF 821
           K++      L K+  ++ + V HL   ++Q   M          + RA FS C +    F
Sbjct: 66  KKDPARHSKLEKAD-ILEMTVKHLQNLQRQQAAMSAATDPSVVSKFRAGFSECASEVGRF 124

Query: 822 PENDPV 839
           P  DPV
Sbjct: 125 PGLDPV 130


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
 Frame = -3

Query: 410 CFCLFDITPDSLSNITSSFCDALLYFFSLHFYFVRLFTSPSIW-RCCEFFSVLAS----L 246
           C   F + P  ++ +TS  C+    ++S   ++ ++  S SI+     F+ +L S     
Sbjct: 203 CLTTFGLLP--VNGVTSEKCNLTFSWYSKKVFYSKIIISGSIFMTTTSFYRILNSGYNLT 260

Query: 245 IFGGAIMLFNSS 210
            FG  I   NS+
Sbjct: 261 TFGSFIFNANSA 272


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
 Frame = -3

Query: 356 FCDALLYFFSLHFYF-VRLFTSPSIWRC-CEFFSVLASLIFGGAIMLFNSS*IFSVAGSF 183
           F   + YF+     F V L     I+   C F      L+F  A + FN   +F +   +
Sbjct: 142 FLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLDY 201

Query: 182 FTVFFL 165
           FT+  L
Sbjct: 202 FTLHLL 207


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 279 SPDTRRSKQADEIEVKTEKI 338
           +PD R  K   E+E+  EKI
Sbjct: 323 NPDVRGIKSVQEVEMLREKI 342


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +3

Query: 717 YSRQQNQTMEQNWMFGEPKETRAKFSNCTASGQL-FPEND 833
           YS+ +NQ + Q++ F + K T   + N  A   + +P +D
Sbjct: 12  YSQFENQAVLQSYNFLQEKTTYEYYENNQALPPITYPPSD 51


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 222 KHDGTSKNK*SEYREKFATSPDTRRSKQADEIEVKTEKI 338
           KHD ++     E  E FAT  ++   K   ++E+  EKI
Sbjct: 236 KHDNSN-----EGGEGFATVEESEIGKNTKQVELTDEKI 269


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -2

Query: 249 TYFWRCHHAFQQFLNLFSSRII 184
           T+FW  H  FQ+    F   I+
Sbjct: 174 THFWHSHSGFQRSDGTFGPFIV 195


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +3

Query: 717 YSRQQNQTMEQNWMFGEPKETRAKFSNCTASGQL-FPEND 833
           YS+ +NQ + Q++ F + K T   + N  A   + +P +D
Sbjct: 3   YSQFENQAVLQSYNFLQEKTTYEYYENNQALPPITYPPSD 42


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = +3

Query: 597 IHNGNQHMFPMTGQGKEETVTEVVLHKSQKLIYLVV 704
           I    +H++ +TG+ KE+      + + +K  + VV
Sbjct: 473 IKPNQKHIYYITGESKEQVANSSFVERVKKRGFEVV 508


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 5/19 (26%), Positives = 15/19 (78%)
 Frame = -3

Query: 779 RFFRFSKHPVLFHSLVLLS 723
           ++++ +  P++FH+L L++
Sbjct: 160 KYYQVTGTPIIFHNLTLIT 178


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 5/19 (26%), Positives = 15/19 (78%)
 Frame = -3

Query: 779 RFFRFSKHPVLFHSLVLLS 723
           ++++ +  P++FH+L L++
Sbjct: 160 KYYQVTGTPIIFHNLTLIT 178


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 653  SNRSGTPQITEIDIFGGEPLG 715
            S+RSGTP+ T  D   G  LG
Sbjct: 940  SDRSGTPRSTNGDRKPGGSLG 960


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,722
Number of Sequences: 336
Number of extensions: 4074
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23140487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)