Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021842
(841 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_18221| Best HMM Match : HHH (HMM E-Value=0.65) 34 0.12
SB_18003| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17
SB_48886| Best HMM Match : 4F5 (HMM E-Value=0.037) 33 0.22
SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.50
SB_22098| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.67
SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09) 30 2.7
SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_18606| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_30472| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_58585| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_30869| Best HMM Match : DUF164 (HMM E-Value=0.18) 29 4.7
SB_41444| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2
SB_31698| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_23547| Best HMM Match : NLPC_P60 (HMM E-Value=2.5) 28 8.2
SB_48346| Best HMM Match : PDZ (HMM E-Value=1.5e-33) 28 8.2
SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_32762| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 28 8.2
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 34.3 bits (75), Expect = 0.12
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +3
Query: 252 SEYREKFATSPDTRRSKQADE-IEVKTEKIEESITKAASDVAQAIGGDVKQTEAELLSRV 428
S + +K PD + +K ADE + K E++ +++ +S +A GD++Q +EL ++V
Sbjct: 869 SMFSQKVVVVPDRKMNKDADEGVSQKVEEMTGKMSELSSTTEKAT-GDIQQHISELSAKV 927
Query: 429 LGKINQTSTTLSDLLVGMKVDRTVEPEK 512
K + + + +K + EK
Sbjct: 928 TRKSDSNTEKTVSYVSEVKTELKENTEK 955
>SB_18221| Best HMM Match : HHH (HMM E-Value=0.65)
Length = 324
Score = 34.3 bits (75), Expect = 0.12
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = +3
Query: 243 NK*SEYREKFATSPDTRRSKQADEIEVKTEKIEESITKA----ASDVAQAIGGDVKQTEA 410
NK S + T+P+ E + K EKI++ T + + +A+ + V + A
Sbjct: 3 NKSSSKSKSITTAPEENEGANRHEEDEKREKIQKHTTNSVDLMTASIAELVSIGVTEELA 62
Query: 411 ELLSRVLGKINQTSTTLSDL 470
L++V GK+N S +S L
Sbjct: 63 SRLTQVRGKLNTVSEVVSVL 82
>SB_18003| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 531
Score = 33.9 bits (74), Expect = 0.17
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 3/110 (2%)
Frame = +3
Query: 201 KDSRTVEKHDGTSKNK*SEYREKFATSPDTRRSKQADEIEVKTEKIEESITKAASDVAQA 380
KD +T ++ G SK K S EK P T+ SKQA E E KT+K T+A +
Sbjct: 248 KDRQTEQRKSGPSKGKVSLKLEKNIL-PATQ-SKQARESEEKTQKKSGGDTQADEMITIT 305
Query: 381 IGGDVKQTEAELLSRVL---GKINQTSTTLSDLLVGMKVDRTVEPEKSNK 521
+ + E + S K+ ++ +L V ++R V K++K
Sbjct: 306 LRPQKSEKEVDASSERAPKDNKVRKSKIKTEELKVPKALEREVGHAKTSK 355
>SB_48886| Best HMM Match : 4F5 (HMM E-Value=0.037)
Length = 476
Score = 33.5 bits (73), Expect = 0.22
Identities = 20/82 (24%), Positives = 34/82 (41%)
Frame = +1
Query: 52 SVTMLTRLKFRKDLRVIARCLSDKSKDNDGKPQVIQDAKKKTVKNDPATEKIQELLKSMM 231
+++ L RL + LRV K D DG + A + +E++K+M
Sbjct: 356 AISQLQRLLDSQSLRVCRHVAGIKRVDKDGDHDTLASAASRNSYIPSLLHFHEEIMKAMN 415
Query: 232 APPKISEASTEKNSQHLQILGE 297
PP I +A ++ L + E
Sbjct: 416 IPPTIPKAQEDRRDLMLNAIAE 437
>SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1711
Score = 32.3 bits (70), Expect = 0.50
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 9/102 (8%)
Frame = +2
Query: 470 FSWDEGRQNSRT*EVQQKPDTREQ---QVKRLVSKAKTTEASPTRYSQRKSA-----YVP 625
F D+ R+ R+ + +K D R + + +R SK++ ++ S+R+S +
Sbjct: 1576 FGLDDDRRRKRSSKSSKKRDRRSRSRSRERRRRSKSRDRDSRSRTSSRRRSRSSERRHRK 1635
Query: 626 NDRTRQGR-DSNRSGTPQITEIDIFGGEPLGIFKTTEPNYGT 748
+DR+R+ DS RSG+ +IDI G F+ + P T
Sbjct: 1636 DDRSRESSYDSRRSGSIGTNKIDIIDNLNWGNFEDSFPLLAT 1677
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +3
Query: 222 KHDGTSKNK*SEYREKFATSPDTRRSKQADEIEVKTEKIEESITKAASDV 371
KH KNK E ++ S +R+ + E+ +K EK+E+ + D+
Sbjct: 315 KHTEEEKNKAIERLKEATISEKGKRNNEITELNIKLEKLEKEFKELQEDL 364
>SB_22098| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 976
Score = 31.9 bits (69), Expect = 0.67
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +3
Query: 231 GTSKNK*SEYREKFATSPDTRRSKQADEIEVKTEKIEESITKAASDVAQAIGGDV 395
G +K EY E F T K+A++ E+K EK E S T + A+ DV
Sbjct: 316 GRNKVSFKEYAELFETVRTEADKKRAEKNEIKKEKAEASKTSVSPKSTAAMARDV 370
>SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09)
Length = 669
Score = 29.9 bits (64), Expect = 2.7
Identities = 25/94 (26%), Positives = 42/94 (44%)
Frame = +3
Query: 261 REKFATSPDTRRSKQADEIEVKTEKIEESITKAASDVAQAIGGDVKQTEAELLSRVLGKI 440
R+K DT+R K +D + K +K+ S+ KA + Q+I D Q+ E ++ + +
Sbjct: 484 RDKVRDLADTKRDKVSDLADTKHDKVISSVEKALN---QSISLDYGQSNKEKATKAVDRA 540
Query: 441 NQTSTTLSDLLVGMKVDRTVEPEKSNKNRILESS 542
Q+ G K KSN N+ + S
Sbjct: 541 -QSIFKCCGATQGPKDWANTAWAKSNTNQTVPES 573
>SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 29.5 bits (63), Expect = 3.6
Identities = 24/71 (33%), Positives = 32/71 (45%)
Frame = +3
Query: 201 KDSRTVEKHDGTSKNK*SEYREKFATSPDTRRSKQADEIEVKTEKIEESITKAASDVAQA 380
K+S VE G + E E T P+ ADE + KIEE+ + A A+A
Sbjct: 503 KESEEVEAETGQVE----EQAEMIETEPEVVEV-HADEEKADKAKIEEAKSDEAEAQAEA 557
Query: 381 IGGDVKQTEAE 413
I V + EAE
Sbjct: 558 IEAKVDKVEAE 568
>SB_18606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1401
Score = 29.5 bits (63), Expect = 3.6
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Frame = +3
Query: 207 SRTVEKHDGTSKNK*SEY-REKFATSPDTRRSK-QADEIEVKTEKIEESITKAAS--DVA 374
+R ++ D T N ++ RE+ A++ R + + D + K +K E + A+ D+A
Sbjct: 535 ARAQDRLDKTLDNAETQLDRERSASAARIRGLEDELDRMAEKLQKANERAYQQAANGDLA 594
Query: 375 QAIGGDVKQTE-----AELLSRVLGKINQTSTTLSDLL 473
+ +G +V + A LLS LGK +Q + L LL
Sbjct: 595 RQLGNEVAALQDEVHRARLLSHKLGKADQDNAALEALL 632
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = +2
Query: 512 VQQKPDTREQQVKRLVSKAKTTEASPT---RYSQRKSAYVPNDRTRQGRDSNRSGTPQI 679
V KP T++ + ++ K T+ +P S + P D + SN+ TPQ+
Sbjct: 563 VSAKPPTKKTTPQSMIPPGKPTDQTPKPPGSTSPNSATQGPTDNLMSAKPSNKKPTPQV 621
>SB_30472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 482
Score = 29.1 bits (62), Expect = 4.7
Identities = 33/138 (23%), Positives = 52/138 (37%)
Frame = +3
Query: 45 RIVSYYVNKTQVQKRFKGNRTVFVRQIQG**WEASSNSRCQEENRKK*SGY*KDSRTVEK 224
R++ Y+ +V KG V + +G +A + ++ QEE +K K +
Sbjct: 289 RLLDEYIGMLKVLLN-KGMTAVAEAEQKGIKEKAETEAKKQEEEERKRDEEKKKAERAAA 347
Query: 225 HDGTSKNK*SEYREKFATSPDTRRSKQADEIEVKTEKIEESITKAASDVAQAIGGDVKQT 404
K K E K+ +E EK E+ I AS + D+K+
Sbjct: 348 EARKKKEKAKSVPEYLVDCTSDTAFKEYTRLEKLLEKTEKEIEPLASSKEK----DMKKL 403
Query: 405 EAELLSRVLGKINQTSTT 458
+ EL V IN S T
Sbjct: 404 KLELQKAVTTPINTISDT 421
>SB_58585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/62 (29%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +3
Query: 234 TSKNK*SEYREKFATSPDTRRSKQADEIEVKTEKIEESITKAASDV-AQAIGGDVKQTEA 410
+SK+K R+K + + + E++VKT+K+ E+++K+ V Q I ++K+T
Sbjct: 17 SSKDKDIILRQKTEELDEAMQEMKRLEMQVKTQKVSETLSKSGCFVEQQEILNNMKKTGD 76
Query: 411 EL 416
+L
Sbjct: 77 DL 78
>SB_30869| Best HMM Match : DUF164 (HMM E-Value=0.18)
Length = 442
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/75 (21%), Positives = 34/75 (45%)
Frame = +1
Query: 67 TRLKFRKDLRVIARCLSDKSKDNDGKPQVIQDAKKKTVKNDPATEKIQELLKSMMAPPKI 246
TR++F+ +L + + +KD + Q + KK+ + E++Q+ + KI
Sbjct: 213 TRIQFQDELNTLKYTVDRTAKDLEATRQKYNELKKEVLTRAERLERVQQERADLQDQLKI 272
Query: 247 SEASTEKNSQHLQIL 291
+ + Q Q+L
Sbjct: 273 ATDESLSAEQRAQML 287
>SB_41444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 690 IYLVVSHLVYSRQQNQTMEQNWMFGEPKETRAKF 791
+Y++++ L ++N ME N +P+ETR+ F
Sbjct: 149 MYIIITPLFMRARKNNAMEYNQKPRDPRETRSDF 182
>SB_31698| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 468
Score = 28.3 bits (60), Expect = 8.2
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = +3
Query: 210 RTVEKHDGTSKNK*SEYREKFATSPDTRRSKQADEIEVK----TEKIEESITKAASDVAQ 377
R VE SK + REK R K+ +E + K TEK+EES+ K V +
Sbjct: 10 RKVEWKGSYSKRTTRKVREKREEGDTRREEKRGEERKKKEKAETEKVEESVRKGKFGVVK 69
Query: 378 AI 383
+
Sbjct: 70 KV 71
>SB_23547| Best HMM Match : NLPC_P60 (HMM E-Value=2.5)
Length = 232
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +1
Query: 100 IARCLSDK-SKDNDGKPQVIQDAKKKTVKND--PATEKIQELLKSMMAPPKISE 252
+ S+K SK+N G PQ+IQD + + D P I+ +++ P ++++
Sbjct: 174 VPEATSEKVSKENQGNPQLIQDPIESNLPVDQPPEPPSIRTSVRARQPPARLND 227
>SB_48346| Best HMM Match : PDZ (HMM E-Value=1.5e-33)
Length = 708
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 626 NDRTRQGRDSNRSGTPQITEIDIFGGEPLGIFKTTEPNYGTKLD 757
+++T + S+R+ T +GG + FK PN+G KLD
Sbjct: 16 SEQTDGRQISSRTSNSTTTTKSKYGGTMVFEFKNCSPNFGIKLD 59
>SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = +2
Query: 527 DTREQQVKRLVSKAKTTEASPTRYSQRKSAYVPNDRTRQGRDSNRSGTPQITEIDIFGGE 706
+ E++ K V +T E P R ++R + N + +Q ++ + T E+ IFGG
Sbjct: 704 EKEEEKYKPKVIPEQTRE--PLRENKRADSREINLQIQQQHEAISALTLPQPEVQIFGGN 761
Query: 707 PLGIFK 724
PL +K
Sbjct: 762 PLEYYK 767
>SB_32762| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 830
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = +1
Query: 67 TRLKFRKDLRVIARCLSDKSKDNDGKPQVIQDAKKKTVKNDPATEKIQELLKSMMAPPKI 246
+R F+ D + +++ S+ + KP+ + KKK K +P QE S+ K
Sbjct: 665 SRPAFKPDKQSVSQSKCKDSRPVESKPKENRPEKKKATKPNPKPSSSQESNWSLEDLTKF 724
Query: 247 SEAS 258
+EA+
Sbjct: 725 TEAA 728
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,594,220
Number of Sequences: 59808
Number of extensions: 448263
Number of successful extensions: 1548
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1529
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2371447782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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