Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021842
(841 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g19160.3 68417.m02827 expressed protein 34 0.14
At4g19160.2 68417.m02826 expressed protein 34 0.14
At4g19160.1 68417.m02828 expressed protein 34 0.14
At1g77300.1 68414.m09002 SET domain-containing protein similar t... 33 0.24
At5g14580.1 68418.m01710 polyribonucleotide nucleotidyltransfera... 32 0.55
At5g57130.1 68418.m07135 expressed protein 31 0.72
At5g47430.1 68418.m05844 expressed protein 31 0.72
At2g23480.1 68415.m02803 hypothetical protein contains Pfam prof... 31 0.95
At5g11710.1 68418.m01368 epsin N-terminal homology (ENTH) domain... 30 2.2
At5g63550.1 68418.m07976 expressed protein 29 2.9
At5g22760.1 68418.m02658 PHD finger family protein contains Pfam... 29 2.9
At2g19410.1 68415.m02264 protein kinase family protein contains ... 29 2.9
At5g55600.1 68418.m06932 agenet domain-containing protein / brom... 29 3.8
At4g03210.1 68417.m00440 xyloglucan:xyloglucosyl transferase, pu... 29 3.8
At5g65900.1 68418.m08295 DEAD/DEAH box helicase, putative contai... 29 5.1
At5g02950.1 68418.m00238 PWWP domain-containing protein predicte... 29 5.1
At1g56510.1 68414.m06498 disease resistance protein (TIR-NBS-LRR... 29 5.1
At1g21810.1 68414.m02729 expressed protein 29 5.1
At4g29940.1 68417.m04259 pathogenesis-related homeodomain protei... 28 6.7
At3g51250.1 68416.m05610 senescence/dehydration-associated prote... 28 6.7
At3g14230.3 68416.m01802 AP2 domain-containing protein RAP2.2 (R... 28 6.7
At3g14230.2 68416.m01801 AP2 domain-containing protein RAP2.2 (R... 28 6.7
At3g14230.1 68416.m01800 AP2 domain-containing protein RAP2.2 (R... 28 6.7
At1g21670.1 68414.m02712 expressed protein similar to TolB prote... 28 6.7
At5g06930.1 68418.m00783 expressed protein 28 8.9
At5g02880.1 68418.m00231 HECT-domain-containing protein / ubiqui... 28 8.9
At3g59410.1 68416.m06626 protein kinase family protein low simil... 28 8.9
>At4g19160.3 68417.m02827 expressed protein
Length = 454
Score = 33.9 bits (74), Expect = 0.14
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Frame = +3
Query: 303 QADEIEVKTEKIEESITKAASDVAQAIGGDVKQTEAELLSRVLG-----KINQTSTTLSD 467
Q+D E +E++ + K+ S+ I K+ EAEL+SR +G + +T L D
Sbjct: 151 QSDPSETDSEELLQLDGKSISEWVSEIDAISKEVEAELVSRDIGCHLVQVLEAVNTVLFD 210
Query: 468 LLVGMKVDRTVEPEKSNKNRIL 533
L + T++PE S + +L
Sbjct: 211 LRGFKRTSITLDPENSYLHSVL 232
>At4g19160.2 68417.m02826 expressed protein
Length = 453
Score = 33.9 bits (74), Expect = 0.14
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Frame = +3
Query: 303 QADEIEVKTEKIEESITKAASDVAQAIGGDVKQTEAELLSRVLG-----KINQTSTTLSD 467
Q+D E +E++ + K+ S+ I K+ EAEL+SR +G + +T L D
Sbjct: 151 QSDPSETDSEELLQLDGKSISEWVSEIDAISKEVEAELVSRDIGCHLVQVLEAVNTVLFD 210
Query: 468 LLVGMKVDRTVEPEKSNKNRIL 533
L + T++PE S + +L
Sbjct: 211 LRGFKRTSITLDPENSYLHSVL 232
>At4g19160.1 68417.m02828 expressed protein
Length = 312
Score = 33.9 bits (74), Expect = 0.14
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Frame = +3
Query: 303 QADEIEVKTEKIEESITKAASDVAQAIGGDVKQTEAELLSRVLG-----KINQTSTTLSD 467
Q+D E +E++ + K+ S+ I K+ EAEL+SR +G + +T L D
Sbjct: 10 QSDPSETDSEELLQLDGKSISEWVSEIDAISKEVEAELVSRDIGCHLVQVLEAVNTVLFD 69
Query: 468 LLVGMKVDRTVEPEKSNKNRIL 533
L + T++PE S + +L
Sbjct: 70 LRGFKRTSITLDPENSYLHSVL 91
>At1g77300.1 68414.m09002 SET domain-containing protein similar to
huntingtin interacting protein 1 [Homo sapiens]
GI:12697196; contains Pfam profile PF00856: SET domain
Length = 1759
Score = 33.1 bits (72), Expect = 0.24
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +3
Query: 222 KHDGTSKNK*SEYREKFATSPDTRRSKQADEIEVKTEKIEESITKAASDVAQAIGGDVKQ 401
KH + N + + KF+ S R ++ E + + + S+ + SD + + +
Sbjct: 761 KHPKSKSNGTKKGKSKFSESAKDGRKNESHEGVEQRKSLNTSMGRDDSDYPEVGRIESHK 820
Query: 402 TEAELLSRVLGKINQTSTTL-SDLLVG-MKVDRTVEPEKSNKN 524
T LL +GK + T T+ SD+ G M VD T+E S ++
Sbjct: 821 TTGALLDADIGKTSATYGTISSDVTHGEMVVDVTIEDSYSTES 863
>At5g14580.1 68418.m01710 polyribonucleotide nucleotidyltransferase,
putative similar to Swiss-Prot:P05055 polyribonucleotide
nucleotidyltransferase (EC 2.7.7.8) (Polynucleotide
phosphorylase) (PNPase) [Escherichia coli]
Length = 991
Score = 31.9 bits (69), Expect = 0.55
Identities = 25/90 (27%), Positives = 45/90 (50%)
Frame = +3
Query: 273 ATSPDTRRSKQADEIEVKTEKIEESITKAASDVAQAIGGDVKQTEAELLSRVLGKINQTS 452
ATS R+ K + T+K EE++ A + A G++ + + +L S V K N T+
Sbjct: 830 ATSKPDRKPKSTASKLIATQKEEEALESIAPEETSAECGEILKQDGKLKS-VSPKNNSTA 888
Query: 453 TTLSDLLVGMKVDRTVEPEKSNKNRILESS 542
S+L+ K ++ E ++N+ ES+
Sbjct: 889 ---SNLVSFSKAKKSTMKENLSENKAEESA 915
>At5g57130.1 68418.m07135 expressed protein
Length = 920
Score = 31.5 bits (68), Expect = 0.72
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +3
Query: 267 KFATSPDTRRSKQADEIEVKTEKIEESITKAASDVAQAI--GGDVKQTEAELLSRVLGKI 440
KF SP + + +++E+ +++ + + + AI GD+K T E+ + G I
Sbjct: 229 KFHFSPMASKFMRREDVELNIKELRKKVLSLTTSGKNAIIFTGDLKWTVKEITNNNSGGI 288
Query: 441 NQTSTTLSDL 470
N+ S++ S L
Sbjct: 289 NEISSSYSPL 298
>At5g47430.1 68418.m05844 expressed protein
Length = 879
Score = 31.5 bits (68), Expect = 0.72
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 527 DTREQQVKRLVSKAKTTEA--SPTRYSQRKSAYVPNDRTRQGRDSNRS 664
D R + KRL + T SP+R S+RKS P++R RQ RD RS
Sbjct: 664 DRRRRPEKRLSPEHPPTRKNISPSRDSKRKSERYPDERDRQ-RDRERS 710
>At2g23480.1 68415.m02803 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 705
Score = 31.1 bits (67), Expect = 0.95
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 267 KFATSPDTRRSKQADEIEVKTEKIEESITKAASDVAQAIGGDVKQTEAE 413
K + +T+ + Q DE+E + EK E S + + +Q +G D E E
Sbjct: 121 KHIPAEETQENMQTDEVEDENEKEEGSEKEESGSSSQTLGSDSDSEETE 169
>At5g11710.1 68418.m01368 epsin N-terminal homology (ENTH)
domain-containing protein / clathrin assembly
protein-related contains Pfam PF01417: ENTH domain. ENTH
(Epsin N-terminal homology) domain; similar to
Af10-protein (GI:1724114) [Avena fatua]; similar to
clathrin assembly protein AP180 (GI:6492344) [Xenopus
laevis]; Af10-protein, Avena fatua, EMBL:U80041
Length = 560
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 626 NDRTRQGRDSNRSGTPQITEIDIFGGEPLGIFKTTEP 736
+D +G SN+ T ++D+FGG+ +G F + P
Sbjct: 268 DDFDPRGTSSNKPSTGSANQVDLFGGDLIGDFLDSGP 304
>At5g63550.1 68418.m07976 expressed protein
Length = 530
Score = 29.5 bits (63), Expect = 2.9
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Frame = +3
Query: 201 KDSRTVEKHDGTSKNK*SEYREKFATSPDTRRSKQADEIEVKTEKIEESITKAASDVAQA 380
KD + K S K S+ K +SP + ++ D +E EK ++ +K + ++
Sbjct: 356 KDKQPSAKGSARSGEKSSKQIAKSTSSP--AKKQKVDHVESSKEKSKKQPSKPQAKGSKE 413
Query: 381 IGGDVKQTEA----------ELLSRVLGKINQTSTTLSDLL 473
G K+ +A E++S++L +++ + TLSD+L
Sbjct: 414 KGKATKKGKAKAEPTRKEMLEVVSKILKEVDFNTATLSDIL 454
>At5g22760.1 68418.m02658 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 1566
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 763 PNIQFCSIVWFCCLEYTKWLTTKYINFCDLW 671
PN+Q + W C L Y LT + CD+W
Sbjct: 1239 PNLQ--PVCWICKLPYNPGLTYIHCTSCDMW 1267
>At2g19410.1 68415.m02264 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain
Length = 801
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +3
Query: 210 RTVEKHDGTSKNK*SEYREKFATSPDTRRSKQADEIEVKTEKIEESITKAASDVAQA 380
+T K +N SE+R+ + P+T R + EIE + E+++ + QA
Sbjct: 276 KTCTKPQSNVENIVSEHRDSDRSPPETSRKSKKVEIEEEVERLKNELQSTVFKYKQA 332
>At5g55600.1 68418.m06932 agenet domain-containing protein /
bromo-adjacent homology (BAH) domain-containing protein
contains Pfam profile PF01426: BAH domain and PF05641:
Agenet domain
Length = 663
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +1
Query: 82 RKDLRVIARCLSDKSKDNDGKPQVI----QDAKKKTVKNDPATEKIQELLKSMMAPPKIS 249
RKD+R+ + D D D KP+++ D+ ++ + +T K P +
Sbjct: 513 RKDIRISRDWVGDSWVDIDPKPEILAIVSSDSSSESKLSMLSTLSKDTKAKPSAMPNIVE 572
Query: 250 EASTEKNSQHLQILGEVN 303
EA E + +LGE N
Sbjct: 573 EAEPEGEKAYNSLLGEQN 590
>At4g03210.1 68417.m00440 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative contains
similarity to xyloglucan endo-transglycosylase-like
protein (XET-1) GI:5070246 from [Medicago truncatula]
Length = 290
Score = 29.1 bits (62), Expect = 3.8
Identities = 10/25 (40%), Positives = 20/25 (80%)
Frame = +3
Query: 645 EETVTEVVLHKSQKLIYLVVSHLVY 719
E TV+E+ LH++ +LI++ +H++Y
Sbjct: 244 EPTVSELSLHQNHQLIWVRANHMIY 268
>At5g65900.1 68418.m08295 DEAD/DEAH box helicase, putative contains
Pfam profiles PF00270:DEAD/DEAH box helicase and
PF00271: Helicase conserved C-terminal domain;
identical to cDNA RH27 helicase, partial GI:4033334
Length = 633
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +3
Query: 312 EIEVKTEKIEESITKAASD-VAQAIGGDVKQTEAELLSRVLGKINQTSTTLSDLL 473
E+ +++ + + + K S V + IGG+ ++TEAE+L++ + + T L D L
Sbjct: 237 ELAIQSYGVAKELLKYHSQTVGKVIGGEKRKTEAEILAKGVNLLVATPGRLLDHL 291
>At5g02950.1 68418.m00238 PWWP domain-containing protein predicted
protein, Arabidopsis thaliana
Length = 632
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +1
Query: 67 TRLKFRKDLRVIARCLSDKSKDNDGKPQVIQDAKKKTVKNDPATEKIQELLKSMMAPPKI 246
T+ K DL V RC S ++ DGK KK+ V++ + + + + KS +
Sbjct: 321 TKEKTLSDLTVKKRCGSRSTEKLDGKS---HSEKKRKVESSESGKSEKRIKKSQQKEDSV 377
Query: 247 SEASTEKN 270
S+ S E++
Sbjct: 378 SKHSNEES 385
>At1g56510.1 68414.m06498 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1007
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +1
Query: 718 IQDNRT-KLWNKTGCLENLKKRELS 789
+QD+ KLW T CL NLKK +LS
Sbjct: 608 MQDSELQKLWEGTQCLANLKKIDLS 632
>At1g21810.1 68414.m02729 expressed protein
Length = 628
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +3
Query: 261 REKFATSPDTRRSKQADEIEVKTEKIEESITKAASDVAQAIGGDVKQTEAELLSRVLGKI 440
+EK T + R + ++ +K EK+E I + D+A A G K + + LGK
Sbjct: 469 KEKCETFEEELRREIEEKTMIKREKVEPKIKQ--EDIATAAG---KFADCQKTIASLGKQ 523
Query: 441 NQTSTTLSDLLV 476
Q+ TL + L+
Sbjct: 524 LQSLATLEEFLI 535
>At4g29940.1 68417.m04259 pathogenesis-related homeodomain protein
(PRHA) identical to Pathogenesis-related homeodomain
protein (PRHA) (SP:P48785) [Arabidopsis thaliana)
Length = 796
Score = 28.3 bits (60), Expect = 6.7
Identities = 24/110 (21%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Frame = +3
Query: 216 VEKHDGTSKNK*SEYREKFATSPDTRRSKQADEIEVKTEKIEESITKAASDVAQAIGGDV 395
VE+++ SK + E S + A+E E +++ IEE + + +++ +
Sbjct: 619 VEENETESKMMKEPHEE---LSSEMSLKTAAEEKETESKMIEEPHEELSREMSLKTAVEE 675
Query: 396 KQTEAELLSRVLGKIN---QTSTTLSDLLVGMKVDRTVEPEKSNKNRILE 536
K+TE++++ ++N ST + + G K+ E SN+ + E
Sbjct: 676 KETESKMMEEPHDELNSEMSLSTAVEEKETGSKMTEESHEELSNEMSLEE 725
>At3g51250.1 68416.m05610 senescence/dehydration-associated
protein-related similar to senescence-associated protein
12 [Hemerocallis hybrid cultivar]
gi|3551958|gb|AAC34857; similar to early-responsive to
dehydration stress ERD7 protein [Arabidopsis thaliana]
gi|15320412|dbj|BAB63916
Length = 463
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +3
Query: 216 VEKHDGTSKNK*SEYREKFATSPDT-RRSKQADEIEVKTEKIEESITKAASDVAQAIGGD 392
++K + KN+ S ++ SP+T RR K+ + TEK+ + V+ I G
Sbjct: 291 LKKGNEVMKNRLSRAEKEKDVSPETLRRIKRVKRVTQMTEKVATGVLSGVVKVSGFITGS 350
Query: 393 VKQTEA 410
+ ++A
Sbjct: 351 MANSKA 356
>At3g14230.3 68416.m01802 AP2 domain-containing protein RAP2.2
(RAP2.2) identical to AP2 domain containing protein
RAP2.2 GI:2281629 from [Arabidopsis thaliana]
Length = 374
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -1
Query: 505 GSTVLSTFIPTKRSLRVVEV*LIFPSTRDRSSAS 404
G ++S FIP RSLRV I+P +++ AS
Sbjct: 3 GGAIISDFIPPPRSLRVTNE-FIWPDLKNKVKAS 35
>At3g14230.2 68416.m01801 AP2 domain-containing protein RAP2.2
(RAP2.2) identical to AP2 domain containing protein
RAP2.2 GI:2281629 from [Arabidopsis thaliana]
Length = 375
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -1
Query: 505 GSTVLSTFIPTKRSLRVVEV*LIFPSTRDRSSAS 404
G ++S FIP RSLRV I+P +++ AS
Sbjct: 3 GGAIISDFIPPPRSLRVTNE-FIWPDLKNKVKAS 35
>At3g14230.1 68416.m01800 AP2 domain-containing protein RAP2.2
(RAP2.2) identical to AP2 domain containing protein
RAP2.2 GI:2281629 from [Arabidopsis thaliana]
Length = 379
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -1
Query: 505 GSTVLSTFIPTKRSLRVVEV*LIFPSTRDRSSAS 404
G ++S FIP RSLRV I+P +++ AS
Sbjct: 3 GGAIISDFIPPPRSLRVTNE-FIWPDLKNKVKAS 35
>At1g21670.1 68414.m02712 expressed protein similar to TolB protein
precursor (SP:P50601) {Pseudomonas aeruginosa}
Length = 703
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 653 SNRSGTPQITEIDIFGGEPLGIFKTTEPNYGTKLDVW 763
S RSGT + +D GE G+F+ T N+ + W
Sbjct: 508 SARSGTKNLYIMDAEKGESGGLFRLTNGNWNDTIATW 544
>At5g06930.1 68418.m00783 expressed protein
Length = 657
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/47 (25%), Positives = 27/47 (57%)
Frame = +3
Query: 225 HDGTSKNK*SEYREKFATSPDTRRSKQADEIEVKTEKIEESITKAAS 365
H+ S N+ Y+EK + + +++ + +E + EK+EE + + A+
Sbjct: 166 HNNESDNETLVYKEKKRSDVEKVLAQKIETMEARIEKLEEELREVAA 212
>At5g02880.1 68418.m00231 HECT-domain-containing protein /
ubiquitin-transferase family protein /
armadillo/beta-catenin-like repeat-containing protein
similar to SP|Q14669 Thyroid receptor interacting
protein 12 (TRIP12) {Homo sapiens}; contains Pfam
profiles PF00632: HECT-domain (ubiquitin-transferase),
PF00514: Armadillo/beta-catenin-like repeat
Length = 1502
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +2
Query: 473 SWDEGRQNSRT*EVQQKPDTREQQVKRLVS--KAKTTEASPTRYSQRKSAYVPNDRTRQG 646
S D G+QN + ++ QKP T+E VK L + + +S T ++ S YV R ++G
Sbjct: 540 SSDRGQQNQGSADLSQKPVTKE-IVKCLCQSFERSLSSSSQTCKIEKDSVYVLATRIKEG 598
>At3g59410.1 68416.m06626 protein kinase family protein low
similarity to GCN2 eIF2alpha kinase [Mus musculus]
GI:6066585; contains Pfam profiles PF03129: Anticodon
binding domain, PF00069: Protein kinase domain
Length = 1241
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -1
Query: 265 SLYSLHLFLEVPSCFSTVLESFQ*PDHFLRFSSWHL--ELLEASHH 134
+L S +L++++ C T+ + F+ +HF + +WHL +++E H
Sbjct: 531 NLESTYLYIQMEYCPRTLRQVFESYNHFDKDFAWHLIRQIVEGLAH 576
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,024,077
Number of Sequences: 28952
Number of extensions: 338070
Number of successful extensions: 1209
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1208
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1941125600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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