Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021841
         (810 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50006-2|CAD44148.1|  523|Caenorhabditis elegans Hypothetical pr...    32   0.42 
Z50006-1|CAA90301.1|  190|Caenorhabditis elegans Hypothetical pr...    32   0.42 
U53153-9|AAC69041.1|  511|Caenorhabditis elegans Hypothetical pr...    32   0.56 
Z92806-3|CAB07256.1|  202|Caenorhabditis elegans Hypothetical pr...    30   2.3  
AL023845-7|CAA19542.1|  381|Caenorhabditis elegans Hypothetical ...    29   3.0  
Z47073-3|CAA87374.1|  999|Caenorhabditis elegans Hypothetical pr...    28   9.1  

>Z50006-2|CAD44148.1|  523|Caenorhabditis elegans Hypothetical
           protein T07C5.1c protein.
          Length = 523

 Score = 32.3 bits (70), Expect = 0.42
 Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
 Frame = -3

Query: 760 LFFVCTVLITRQNLVLSLGFLICNASITRSGVLEVCKDILIIPTAPLYSVCFRLIPNL-E 584
           +FF  T L+    +V +   L+   SI++S VL   K   ++  A   +V F  IP+  +
Sbjct: 9   MFFCLTALLHGSFIVNAAKILVYCPSISKSHVLLCSKYADLLHNAGHDTVLF--IPSYSK 66

Query: 583 LTEDREFSIHRLEAMFWQITNITPSKDIHRGTLVN 479
           L ++ + + H   A  W++ N+T + D   GTL N
Sbjct: 67  LLDNYDGAKH---AKVWRLHNVTEAYDTKLGTLAN 98


>Z50006-1|CAA90301.1|  190|Caenorhabditis elegans Hypothetical
           protein T07C5.1b protein.
          Length = 190

 Score = 32.3 bits (70), Expect = 0.42
 Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
 Frame = -3

Query: 760 LFFVCTVLITRQNLVLSLGFLICNASITRSGVLEVCKDILIIPTAPLYSVCFRLIPNL-E 584
           +FF  T L+    +V +   L+   SI++S VL   K   ++  A   +V F  IP+  +
Sbjct: 9   MFFCLTALLHGSFIVNAAKILVYCPSISKSHVLLCSKYADLLHNAGHDTVLF--IPSYSK 66

Query: 583 LTEDREFSIHRLEAMFWQITNITPSKDIHRGTLVN 479
           L ++ + + H   A  W++ N+T + D   GTL N
Sbjct: 67  LLDNYDGAKH---AKVWRLHNVTEAYDTKLGTLAN 98


>U53153-9|AAC69041.1|  511|Caenorhabditis elegans Hypothetical
           protein T19A5.5 protein.
          Length = 511

 Score = 31.9 bits (69), Expect = 0.56
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 479 IYQCSTMYIFRRCNICDLPEHG 544
           I+QCS   I  +C +CD P HG
Sbjct: 115 IFQCSPKLISEKCLVCDQPSHG 136


>Z92806-3|CAB07256.1|  202|Caenorhabditis elegans Hypothetical
           protein K10G4.3 protein.
          Length = 202

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 18/70 (25%), Positives = 35/70 (50%)
 Frame = +1

Query: 154 QNNRPNPKISKGMRESLRENRRNFRIGEKKPRNINKIYNPINPSLKNLSLSKIRADHYSD 333
           +NN+ N KI + +++   + R+N     ++ R+   I     P+L+   L  +  D   D
Sbjct: 122 RNNQNNDKIYEAIKKEKEKIRKNVYERNEQLRDFKNIPYGFQPTLE---LHNLMQDQIED 178

Query: 334 FIDDDLKLYI 363
           FI++ L  Y+
Sbjct: 179 FIEEYLGQYL 188


>AL023845-7|CAA19542.1|  381|Caenorhabditis elegans Hypothetical
           protein Y51B9A.9 protein.
          Length = 381

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
 Frame = -2

Query: 524 KYYTVERYTSWNTGKLVISMTPFSMDS---KRIFSNVVLIVLNNSKSIRI 384
           ++YTV  Y  WN    ++S TP  +D    K IF +V L V     SIR+
Sbjct: 96  EFYTVREYMDWNLRNFILS-TPEKLDHKVIKSIFFDVCLAV-QYMHSIRV 143


>Z47073-3|CAA87374.1|  999|Caenorhabditis elegans Hypothetical
           protein ZC506.4a protein.
          Length = 999

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
 Frame = -3

Query: 778 LQHYIRLFFVCTVLITRQNLVLSLGFLICNASITRSGVLEVCKDILIIPTAPLYSVCFRL 599
           ++H   +  +   ++   N+V      +  A   +   + +  DILI    P++S     
Sbjct: 43  IRHMFSVLALAIQILANVNVVAQTTEAVDLAPPPKVRQIRIPGDILIGGVFPVHSKSLNG 102

Query: 598 I-PNLELTEDREFSIHRLEAMFWQITNITPSKDIHRG 491
             P  E+ E R   +HR+EAM + +  I    D  RG
Sbjct: 103 DEPCGEIAETR--GVHRVEAMLYALDQINSQNDFLRG 137


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,356,284
Number of Sequences: 27780
Number of extensions: 395091
Number of successful extensions: 1226
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1226
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)