Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021840X
         (449 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr...    60   7e-10
U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain, un...    34   0.055
AC024843-8|AAM48560.1|  726|Caenorhabditis elegans Hypothetical ...    29   1.6  
AC024843-7|AAF60843.2|  743|Caenorhabditis elegans Hypothetical ...    29   1.6  
AC024843-6|AAF60844.3|  525|Caenorhabditis elegans Hypothetical ...    29   1.6  
U51997-1|AAG24067.1|  572|Caenorhabditis elegans Activated in bl...    28   2.7  
U80033-4|AAC48198.2|  467|Caenorhabditis elegans Hypothetical pr...    27   6.3  

>Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical protein
            F46C3.3 protein.
          Length = 2557

 Score = 60.1 bits (139), Expect = 7e-10
 Identities = 32/65 (49%), Positives = 44/65 (67%)
 Frame = +3

Query: 255  ECFTCVRAYCGDLQPNERTTHHDLTEVKCVYTVLMHCHSVPELRDEVYCQLMKQTTSNRS 434
            E F  +  + GD +P +++    +T+V  V+ VL+ CH  P LRDEVYCQL+KQTTSN S
Sbjct: 2103 ETFHAIMKFMGD-EPLKKS--ESMTDV--VFKVLLICHRQPTLRDEVYCQLIKQTTSNIS 2157

Query: 435  QAPDS 449
            Q P+S
Sbjct: 2158 QKPNS 2162


>U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain,
            unconventional myosinprotein 6 protein.
          Length = 2098

 Score = 33.9 bits (74), Expect = 0.055
 Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
 Frame = +3

Query: 255  ECFTCVRAYCGDLQPNERT---THHDLTEVKCVYTVLMHCHSVPELRDEVYCQLMKQTTS 425
            E F  +  Y GD +P++R+   TH  LT+   ++ + +   S+  LRDE+YCQL+KQ T 
Sbjct: 1649 EIFAAIMKYMGD-EPSKRSRLGTH--LTDH--IFKLPI---SMEALRDELYCQLVKQLTL 1700

Query: 426  NRS 434
            N S
Sbjct: 1701 NPS 1703



 Score = 31.9 bits (69), Expect = 0.22
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = +3

Query: 378  ELRDEVYCQLMKQTTSNRSQ 437
            +LRDE+YCQL KQ ++N S+
Sbjct: 1078 DLRDEIYCQLCKQLSNNPSK 1097


>AC024843-8|AAM48560.1|  726|Caenorhabditis elegans Hypothetical
           protein Y61A9LA.3c protein.
          Length = 726

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = -3

Query: 441 GPETGSMWSASSAGSTPRHGVRALSDNALGPCKHISLRSG 322
           GP   SM +A   GS P HG + + D   GP    S R G
Sbjct: 32  GPPVPSMRAAILGGSDPYHGFQPVVDTYNGPVVDNSRRRG 71


>AC024843-7|AAF60843.2|  743|Caenorhabditis elegans Hypothetical
           protein Y61A9LA.3a protein.
          Length = 743

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = -3

Query: 441 GPETGSMWSASSAGSTPRHGVRALSDNALGPCKHISLRSG 322
           GP   SM +A   GS P HG + + D   GP    S R G
Sbjct: 32  GPPVPSMRAAILGGSDPYHGFQPVVDTYNGPVVDNSRRRG 71


>AC024843-6|AAF60844.3|  525|Caenorhabditis elegans Hypothetical
           protein Y61A9LA.3b protein.
          Length = 525

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = -3

Query: 441 GPETGSMWSASSAGSTPRHGVRALSDNALGPCKHISLRSG 322
           GP   SM +A   GS P HG + + D   GP    S R G
Sbjct: 32  GPPVPSMRAAILGGSDPYHGFQPVVDTYNGPVVDNSRRRG 71


>U51997-1|AAG24067.1|  572|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 2 protein.
          Length = 572

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
 Frame = +3

Query: 270 VRAYCGDLQPNERTTHHDLTEV---KCVYTVLMHCHSVPELRD-EVYCQLMKQTTS 425
           V+  C   QP ++ T+   T      C  +  +HCHS P +++ +  CQ   QTTS
Sbjct: 62  VQTSCSCAQPVQQQTYLVPTSQCAPACQQSCQIHCHSAPFVQECQSSCQQSCQTTS 117


>U80033-4|AAC48198.2|  467|Caenorhabditis elegans Hypothetical
           protein T23H2.4 protein.
          Length = 467

 Score = 27.1 bits (57), Expect = 6.3
 Identities = 7/14 (50%), Positives = 13/14 (92%)
 Frame = -1

Query: 203 PVACHFTTSVCAFQ 162
           P++CHF +S+C++Q
Sbjct: 217 PISCHFRSSICSWQ 230


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,265,267
Number of Sequences: 27780
Number of extensions: 147455
Number of successful extensions: 452
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 452
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)