Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021839
         (831 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    97   6e-22
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    97   6e-22
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    97   6e-22
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    97   8e-22

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 97.1 bits (231), Expect = 6e-22
 Identities = 47/108 (43%), Positives = 71/108 (65%), Gaps = 2/108 (1%)
 Frame = +2

Query: 254 RSILQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 433
           + +++AH+ +LS CSPYF+++F  N   HPI++L+DV  + +R LL FMYQGEVNV Q  
Sbjct: 86  KGMVKAHQAILSACSPYFEQIFVENKHPHPIIYLRDVEVNEMRALLDFMYQGEVNVGQHN 145

Query: 434 LASFISTAEQLQVKGLTGNQNEESSRHPNQSRLRGQ--APGRHNKDNL 571
           L +F+ TAE L+V+GLT +  +  S     S+LR +     R  +D+L
Sbjct: 146 LQNFLKTAESLKVRGLTESSADRYSA-DTDSKLRSERIRDSRDERDSL 192



 Score = 34.7 bits (76), Expect = 0.003
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +1

Query: 148 DEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEE 258
           D+Q+ L WNN  +N++     LL    L DVTLA E+
Sbjct: 50  DQQYCLRWNNHQSNLTTVLTTLLQDEKLCDVTLACEK 86


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 97.1 bits (231), Expect = 6e-22
 Identities = 47/108 (43%), Positives = 71/108 (65%), Gaps = 2/108 (1%)
 Frame = +2

Query: 254 RSILQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 433
           + +++AH+ +LS CSPYF+++F  N   HPI++L+DV  + +R LL FMYQGEVNV Q  
Sbjct: 86  KGMVKAHQAILSACSPYFEQIFVENKHPHPIIYLRDVEVNEMRALLDFMYQGEVNVGQHN 145

Query: 434 LASFISTAEQLQVKGLTGNQNEESSRHPNQSRLRGQ--APGRHNKDNL 571
           L +F+ TAE L+V+GLT +  +  S     S+LR +     R  +D+L
Sbjct: 146 LQNFLKTAESLKVRGLTESSADRYSA-DTDSKLRSERIRDSRDERDSL 192



 Score = 34.7 bits (76), Expect = 0.003
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +1

Query: 148 DEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEE 258
           D+Q+ L WNN  +N++     LL    L DVTLA E+
Sbjct: 50  DQQYCLRWNNHQSNLTTVLTTLLQDEKLCDVTLACEK 86


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 97.1 bits (231), Expect = 6e-22
 Identities = 47/108 (43%), Positives = 71/108 (65%), Gaps = 2/108 (1%)
 Frame = +2

Query: 254 RSILQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 433
           + +++AH+ +LS CSPYF+++F  N   HPI++L+DV  + +R LL FMYQGEVNV Q  
Sbjct: 38  KGMVKAHQAILSACSPYFEQIFVENKHPHPIIYLRDVEVNEMRALLDFMYQGEVNVGQHN 97

Query: 434 LASFISTAEQLQVKGLTGNQNEESSRHPNQSRLRGQ--APGRHNKDNL 571
           L +F+ TAE L+V+GLT +  +  S     S+LR +     R  +D+L
Sbjct: 98  LQNFLKTAESLKVRGLTESSADRYSA-DTDSKLRSERIRDSRDERDSL 144



 Score = 33.9 bits (74), Expect = 0.006
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +1

Query: 148 DEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEE 258
           D+Q+ L WNN   N++     LL    L DVTLA E+
Sbjct: 2   DQQYCLRWNNHQPNLTTVLTTLLQDEKLCDVTLACEK 38


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 96.7 bits (230), Expect = 8e-22
 Identities = 47/108 (43%), Positives = 71/108 (65%), Gaps = 2/108 (1%)
 Frame = +2

Query: 254 RSILQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 433
           + +++AH+ +LS CSPYF+++F  N   HPI++L+DV  + +R LL FMYQGEVNV Q  
Sbjct: 86  KGMVKAHQAILSACSPYFEQIFVENKHLHPIIYLRDVEVNEMRALLDFMYQGEVNVGQHN 145

Query: 434 LASFISTAEQLQVKGLTGNQNEESSRHPNQSRLRGQ--APGRHNKDNL 571
           L +F+ TAE L+V+GLT +  +  S     S+LR +     R  +D+L
Sbjct: 146 LQNFLKTAESLKVRGLTESSADRYSA-DTDSKLRSERIRDSRDERDSL 192



 Score = 34.7 bits (76), Expect = 0.003
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +1

Query: 148 DEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEE 258
           D+Q+ L WNN  +N++     LL    L DVTLA E+
Sbjct: 50  DQQYCLRWNNHQSNLTTVLTTLLQDEKLCDVTLACEK 86


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 827,730
Number of Sequences: 2352
Number of extensions: 16080
Number of successful extensions: 34
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 87651612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)