Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021839
         (831 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      97   1e-22
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          82   5e-18
AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.      38   9e-05
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              28   0.092
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    24   1.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   1.5  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    24   2.0  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   4.6  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   6.0  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   6.0  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   6.0  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   8.0  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 97.5 bits (232), Expect = 1e-22
 Identities = 46/96 (47%), Positives = 65/96 (67%)
 Frame = +2

Query: 263 LQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELAS 442
           L+AH++VLS CSPYF+E+ K  P +HP++ L+DV+ S L  L++F+Y GEVNV Q  L+S
Sbjct: 43  LKAHRVVLSACSPYFRELLKSTPCKHPVIVLQDVAFSDLHALVEFIYHGEVNVHQRSLSS 102

Query: 443 FISTAEQLQVKGLTGNQNEESSRHPNQSRLRGQAPG 550
           F+ TAE L+V GLT  Q  + +     S +R  A G
Sbjct: 103 FLKTAEVLRVSGLT--QQADQTDRDELSHVRALAAG 136



 Score = 37.1 bits (82), Expect = 2e-04
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 139 MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAE 255
           M   + F L WNN+ +++++ F  L    D VDVTLA +
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACD 39


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 82.2 bits (194), Expect = 5e-18
 Identities = 35/74 (47%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
 Frame = +2

Query: 263 LQAHKLVLSVCSPYFQEMFKMNPTQHPIVFL-KDVSHSALRDLLQFMYQGEVNVKQEELA 439
           L+AHK+VLS CS YFQ++   NP +HP + + +DV  + L+ +++F+Y+GE++V Q EL 
Sbjct: 47  LKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQ 106

Query: 440 SFISTAEQLQVKGL 481
           S + TA+QL++KGL
Sbjct: 107 SLLKTADQLKIKGL 120



 Score = 39.9 bits (89), Expect = 3e-05
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = +1

Query: 151 EQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEE 258
           + + L WNN+ +NM++ FH LL     VDVTLA  E
Sbjct: 9   QHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNE 44


>AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.
          Length = 39

 Score = 38.3 bits (85), Expect = 9e-05
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 139 MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAE 255
           M   + F L WNN+ +++++ F  L    D VDVTLA E
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACE 39


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 28.3 bits (60), Expect = 0.092
 Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +2

Query: 386 LLQFMYQGEVNVKQEELASFIS-TAEQLQVKGLTGNQNEESSR 511
           ++  +Y G VNV+ E + S++    ++  V    GN NE+++R
Sbjct: 43  IIDEVYNGNVNVEDENVQSYVECMMKKFNVVDENGNFNEKNTR 85


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 801 PFWERQHCSHLRLYRHKFVFCRTR 730
           P  + Q CS LR+ R++  +CR +
Sbjct: 54  PCTKNQQCSILRINRNRCQYCRLK 77


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 801 PFWERQHCSHLRLYRHKFVFCRTR 730
           P  + Q CS LR+ R++  +CR +
Sbjct: 103 PCTKNQQCSILRINRNRCQYCRLK 126


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -1

Query: 504 LSSF*LPVKPLT*SCSAVLINDANSSCLTLTSP 406
           LSS      P+T + S ++ N  NS+C    SP
Sbjct: 323 LSSSTTTTSPMTSTKSTIVRNHLNSTCSVTNSP 355


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +1

Query: 115 VPRRVVAIMASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTL 246
           V R +VA++ +   F +CW  FHA      +   S+    DV +
Sbjct: 283 VIRMLVAVVVA---FFICWAPFHAQRLLAVYAQNSKDKPEDVLI 323


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +2

Query: 416 NVKQEELASFISTAEQLQVKGLTGNQNEESSRHPNQSRLR 535
           NV   +L +   T   + +  +TG+Q+++      QSR+R
Sbjct: 469 NVDVSQLVTLF-TDFYVDLDAVTGHQSQQQQEEQTQSRVR 507


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
 Frame = -2

Query: 566 CLCCDDL-GPGLEVGFGLDGG 507
           C CCD+L GPG     G+  G
Sbjct: 13  CWCCDNLGGPGSSSAGGVVTG 33


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +2

Query: 479 LTGNQNEESSRHPNQSRLRGQAPGRHNKD 565
           +   ++  SSR P+ S L  Q    HNK+
Sbjct: 32  IVDRRSPSSSRSPSPSLLTSQPHQDHNKE 60


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 116 FHVESSLSWRRTNNFHY 166
           +   +S SWR TNN  Y
Sbjct: 211 YDFRNSRSWRITNNLFY 227


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,183
Number of Sequences: 438
Number of extensions: 4492
Number of successful extensions: 22
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26581563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)