Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021839
         (831 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g30600.2 68415.m03729 BTB/POZ domain-containing protein conta...    46   4e-05
At2g30600.1 68415.m03728 BTB/POZ domain-containing protein conta...    46   4e-05
At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Inter...    40   0.002
At1g01640.2 68414.m00082 speckle-type POZ protein-related contai...    38   0.011
At1g01640.1 68414.m00081 speckle-type POZ protein-related contai...    38   0.011
At2g04740.1 68415.m00484 ankyrin repeat family protein contains ...    37   0.019
At5g21010.1 68418.m02497 speckle-type POZ protein-related contai...    35   0.076
At3g43700.1 68416.m04664 speckle-type POZ protein-related contai...    34   0.10 
At4g29220.1 68417.m04180 phosphofructokinase family protein simi...    33   0.31 
At5g48510.1 68418.m05998 speckle-type POZ protein-related contai...    30   1.6  
At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family pr...    30   2.2  
At4g04090.1 68417.m00578 speckle-type POZ protein-related contai...    29   3.8  
At2g40440.1 68415.m04990 BTB/POZ domain-containing protein conta...    28   6.6  
At2g39760.1 68415.m04882 speckle-type POZ protein-related contai...    28   6.6  

>At2g30600.2 68415.m03729 BTB/POZ domain-containing protein contains
           Pfam PF00651: BTB/POZ domain; contains Interpro
           IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
           (GI:1841872) [Dictyostelium discoideum]
          Length = 809

 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
 Frame = +2

Query: 266 QAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVK 424
           Q+HK++LS+ S  F +MF   M+ +    ++L DVS  A + ++ FMY GE+N++
Sbjct: 365 QSHKVILSLWSVAFAKMFTNGMSESHSSTIYLTDVSPEAFKAMMNFMYSGELNME 419



 Score = 38.3 bits (85), Expect = 0.006
 Identities = 24/82 (29%), Positives = 39/82 (47%)
 Frame = +2

Query: 269 AHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFI 448
           AHK++L          F +  +   ++ L+ VS+  L  LLQ++Y G   + + ELA   
Sbjct: 226 AHKVILQASGN-----FPLRSSDGDVIQLRGVSYPILHALLQYIYTGRTQILESELAPLR 280

Query: 449 STAEQLQVKGLTGNQNEESSRH 514
             + + +V  L   Q EES  H
Sbjct: 281 DLSSKFEVMSLV-RQCEESIDH 301


>At2g30600.1 68415.m03728 BTB/POZ domain-containing protein contains
           Pfam PF00651: BTB/POZ domain; contains Interpro
           IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
           (GI:1841872) [Dictyostelium discoideum]
          Length = 809

 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
 Frame = +2

Query: 266 QAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVK 424
           Q+HK++LS+ S  F +MF   M+ +    ++L DVS  A + ++ FMY GE+N++
Sbjct: 365 QSHKVILSLWSVAFAKMFTNGMSESHSSTIYLTDVSPEAFKAMMNFMYSGELNME 419



 Score = 38.3 bits (85), Expect = 0.006
 Identities = 24/82 (29%), Positives = 39/82 (47%)
 Frame = +2

Query: 269 AHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFI 448
           AHK++L          F +  +   ++ L+ VS+  L  LLQ++Y G   + + ELA   
Sbjct: 226 AHKVILQASGN-----FPLRSSDGDVIQLRGVSYPILHALLQYIYTGRTQILESELAPLR 280

Query: 449 STAEQLQVKGLTGNQNEESSRH 514
             + + +V  L   Q EES  H
Sbjct: 281 DLSSKFEVMSLV-RQCEESIDH 301


>At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Interpro
           IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56
           protein (GI:17483747) [Mus musculus]
          Length = 243

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
 Frame = +2

Query: 263 LQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 436
           + AHK VL   SP F+ M +  M  +    + + DVS+ ALR  + ++Y  E  + ++  
Sbjct: 80  IPAHKSVLVSRSPVFKAMLENEMEESLSGTIKISDVSYDALRTFVYYLYTAEACLDEQMA 139

Query: 437 ASFISTAEQLQVKGL 481
              +  +E+ QVK L
Sbjct: 140 CDLLVMSEKYQVKHL 154


>At1g01640.2 68414.m00082 speckle-type POZ protein-related contains
           Pfam profile:PF00651 BTB/POZ domain; similar to
           Speckle-type POZ protein (SP:O43791) [Homo sapiens]
          Length = 207

 Score = 37.5 bits (83), Expect = 0.011
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
 Frame = +2

Query: 263 LQAHKLVLSVCSPYFQEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 433
           +  HK VL+  S  F+ M    +   +    + L D+SH  L+ LL+F+Y G +     +
Sbjct: 37  IPTHKAVLAARSKVFRNMLDSDECKTSPEESITLPDLSHDELKSLLEFLYSGNLKAPYNQ 96

Query: 434 LASFISTAEQLQVKGL 481
             S    A++  +  L
Sbjct: 97  YRSLYLAADKYDISYL 112


>At1g01640.1 68414.m00081 speckle-type POZ protein-related contains
           Pfam profile:PF00651 BTB/POZ domain; similar to
           Speckle-type POZ protein (SP:O43791) [Homo sapiens]
          Length = 207

 Score = 37.5 bits (83), Expect = 0.011
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
 Frame = +2

Query: 263 LQAHKLVLSVCSPYFQEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 433
           +  HK VL+  S  F+ M    +   +    + L D+SH  L+ LL+F+Y G +     +
Sbjct: 37  IPTHKAVLAARSKVFRNMLDSDECKTSPEESITLPDLSHDELKSLLEFLYSGNLKAPYNQ 96

Query: 434 LASFISTAEQLQVKGL 481
             S    A++  +  L
Sbjct: 97  YRSLYLAADKYDISYL 112


>At2g04740.1 68415.m00484 ankyrin repeat family protein contains
           ankyrin repeats, Pfam:PF00023
          Length = 578

 Score = 36.7 bits (81), Expect = 0.019
 Identities = 17/75 (22%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
 Frame = +2

Query: 263 LQAHKLVLSVCSPYFQEMFKMN-PTQHPIVFLKD-VSHSALRDLLQFMYQGEVNVKQEEL 436
           ++AH+++LS  SP+F++ F+     +  + F K+ +S+ AL  L+ F Y   + +  +++
Sbjct: 184 IEAHRVILSARSPFFKQKFENEWKDRREVRFSKEKLSYPALCSLIHFFYSDRLEISVDDM 243

Query: 437 ASFISTAEQLQVKGL 481
              +   +  + + L
Sbjct: 244 EDLVRICKVCKCESL 258


>At5g21010.1 68418.m02497 speckle-type POZ protein-related contains
           Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
           MATH domain; similar to Speckle-type POZ protein
           (SP:O43791) [Homo sapiens]
          Length = 410

 Score = 34.7 bits (76), Expect = 0.076
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +2

Query: 269 AHKLVLSVCSPYFQ-EMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQ 406
           AHKLVL+  SP+F+ + F      +  V + D+     + LLQFMY+
Sbjct: 211 AHKLVLAARSPFFKSKFFSEFEANNTEVTINDLEPKVFKALLQFMYK 257


>At3g43700.1 68416.m04664 speckle-type POZ protein-related contains
           Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
           MATH domain; similar to Speckle-type POZ protein
           (SP:O43791) [Homo sapiens]
          Length = 415

 Score = 34.3 bits (75), Expect = 0.10
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = +2

Query: 266 QAHKLVLSVCSPYFQEMFKMNPTQ-HPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELAS 442
           QAHKLVL+  S +F+ MF     + +  V + D+     + LL FMY+  +    E L +
Sbjct: 217 QAHKLVLAARSQFFRSMFYNTLAENNSDVVISDLEPKVFKALLHFMYKDSLPGDVEPLTA 276


>At4g29220.1 68417.m04180 phosphofructokinase family protein similar
           to phosphofructokinase [Amycolatopsis methanolica]
           GI:17432243; contains Pfam profile PF00365:
           Phosphofructokinase
          Length = 473

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 25/73 (34%), Positives = 36/73 (49%)
 Frame = -2

Query: 725 PASSGSTHFRFAGPLCEEEELFDAIDGLFGLLTATGVEEGLESRSVSNLVITDCLCCDDL 546
           P S   THFR AGP   +   F++ D L  ++T  G+  GL      N VI + +C    
Sbjct: 69  PDSPRGTHFRRAGP--RQRVYFESDDVLACIVTCGGLCPGL------NTVIREIVCGLSY 120

Query: 545 GPGLEVGFGLDGG 507
             G++   G+DGG
Sbjct: 121 MYGVKRILGIDGG 133


>At5g48510.1 68418.m05998 speckle-type POZ protein-related contains
           Pfam PF00651 : BTB/POZ domain; similar to Speckle-type
           POZ protein (SP:O43791) [Homo sapiens]
          Length = 224

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 9/74 (12%)
 Frame = +2

Query: 257 SILQAHKLVLSVCSPYFQEMFKMN----PTQH-PIVFLKDVSHSALRDLLQFMYQG---- 409
           S + AHKL+L+  S  F+ MF+++     T+H   + L ++ H  L   ++F+       
Sbjct: 37  SAISAHKLILASRSEVFKNMFELDEFKTSTKHVETITLSEMKHEELEAFVEFICSDGSML 96

Query: 410 EVNVKQEELASFIS 451
             NVKQ   + +++
Sbjct: 97  SANVKQHARSLYLA 110


>At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family
           protein / BTB/POZ domain-containing protein contains
           armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
           BTB/POZ domain, Pfam:PF00651
          Length = 709

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
 Frame = +2

Query: 269 AHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELAS 442
           AHK+ L   S  F+ MF           V + ++       +++F+Y G +N+ +     
Sbjct: 553 AHKIGLVASSDIFRAMFDGLYKERNAQNVEIPNIRWEVFELMMKFIYSGRINIAKHLAKD 612

Query: 443 FISTAEQLQVKGL 481
            +  A+Q  ++GL
Sbjct: 613 LLVAADQYLLEGL 625


>At4g04090.1 68417.m00578 speckle-type POZ protein-related contains
           Pfam PF00651 : BTB/POZ domain;  similar to Speckle-type
           POZ protein (SP:O43791) [Homo sapiens]
          Length = 192

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
 Frame = +2

Query: 263 LQAHKLVLSVCSPYFQEMFKMN----PTQHPIVFLKDVSHSALRDLLQFMY 403
           + AHK +LS  S  F+EMF+ +     ++   + L ++ H  L   + F Y
Sbjct: 38  ISAHKRILSARSEVFEEMFESDKYKASSKLETITLSEMKHEVLEAFVDFTY 88


>At2g40440.1 68415.m04990 BTB/POZ domain-containing protein contains
           Pfam PF00651: BTB/POZ domain; contains  Interpro
           IPR000210/ PS50097: BTBB/POZ domain;
          Length = 194

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
 Frame = +2

Query: 269 AHKLVLSVCSPYFQEMFKMN----PTQHPIVFLKDVSHSALRDLLQFMY 403
           AHKLVLS  S  F++M + +      Q   + L ++ H  L   ++F+Y
Sbjct: 42  AHKLVLSARSEVFKKMLESDEIKASAQLETITLCEMKHEELEAFIEFIY 90


>At2g39760.1 68415.m04882 speckle-type POZ protein-related contains
           Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
           MATH domain; similar to Speckle-type POZ protein
           (SP:O43791) [Homo sapiens]
          Length = 408

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = +2

Query: 266 QAHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMY 403
           +AHKL+L+  SP F+  F   +       + + D+  S  + +L F+Y
Sbjct: 206 KAHKLILAARSPVFRAQFFGPIGNNNVDRIVIDDIEPSIFKAMLSFIY 253


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,124,777
Number of Sequences: 28952
Number of extensions: 342589
Number of successful extensions: 927
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1911862400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)