Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021837
(831 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 126 3e-29
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 89 4e-18
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 88 6e-18
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 77 2e-14
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 73 3e-13
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 63 3e-10
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 63 3e-10
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 63 3e-10
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 56 2e-08
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 55 7e-08
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 55 7e-08
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 55 7e-08
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 54 9e-08
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 54 9e-08
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 54 9e-08
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 54 2e-07
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 54 2e-07
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 50 2e-06
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 50 2e-06
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 50 2e-06
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 49 4e-06
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 49 5e-06
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 48 6e-06
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 48 6e-06
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 47 1e-05
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 47 1e-05
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 46 3e-05
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 44 1e-04
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 44 1e-04
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 44 2e-04
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 43 2e-04
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 43 2e-04
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 43 3e-04
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 40 0.002
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 39 0.005
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 34 0.14
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 34 0.14
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 34 0.14
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 33 0.19
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 33 0.25
AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical... 33 0.33
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 31 0.77
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 31 1.0
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 31 1.0
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 30 2.3
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 29 3.1
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 4.1
U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis ... 29 4.1
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 4.1
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 4.1
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 5.4
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 29 5.4
U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical pr... 29 5.4
U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation fact... 28 7.1
U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation fact... 28 7.1
U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation fact... 28 7.1
U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation fact... 28 7.1
Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical pr... 28 9.4
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 126 bits (303), Expect = 3e-29
Identities = 59/105 (56%), Positives = 80/105 (76%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 694
++TGSGKTLA++LPA+VHI Q +RG+GP LVL PTRELAQQ+Q+V+ DF H+ ++
Sbjct: 173 AKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLK 232
Query: 695 NTCVFGGAPKREQARDLERGVEMSLLLQVD*LIFLEKGTTNLQRC 829
TC+FGGA K QARDLERGV++ + L FL+ GTTN+++C
Sbjct: 233 MTCLFGGASKGPQARDLERGVDIVVATPGRLLDFLDNGTTNMKKC 277
Score = 68.5 bits (160), Expect = 5e-12
Identities = 50/185 (27%), Positives = 85/185 (45%), Gaps = 1/185 (0%)
Frame = +1
Query: 256 LQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 435
L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA P + + +
Sbjct: 87 LTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHE-LL 145
Query: 436 TMGYKEPTPIQAQGWPIAMSGKNLVA*PNGFRQNVGLHLASNCAHK*PTAYSER*WSDCF 615
+++PT IQ+ WPIAMSG+++++ + H A+ +R
Sbjct: 146 YGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAV 205
Query: 616 GLGAYQRVSTTNSASCCRFWTHILCS*HVCVWWCS*K-RASPGLGEGSRNVIATPGRLID 792
+ R + H L C++ + K + L G V+ATPGRL+D
Sbjct: 206 LVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRLLD 265
Query: 793 FLGKG 807
FL G
Sbjct: 266 FLDNG 270
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 89.0 bits (211), Expect = 4e-18
Identities = 44/105 (41%), Positives = 65/105 (61%), Gaps = 1/105 (0%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 694
++TGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA Q+ Q A F +
Sbjct: 309 AKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNIN 368
Query: 695 NTCVFGGAPKREQARDLE-RGVEMSLLLQVD*LIFLEKGTTNLQR 826
C +GG K EQ+ +L+ G EM + + ++ G TN R
Sbjct: 369 PICAYGGGSKWEQSNELQNEGAEMVVCTPGRIIDLVKMGATNFLR 413
Score = 59.7 bits (138), Expect = 3e-09
Identities = 26/84 (30%), Positives = 47/84 (55%)
Frame = +1
Query: 259 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 438
Q FNKNFY+ H + + +V +N + V G++ P+ F +F + + ++
Sbjct: 223 QKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRK 282
Query: 439 MGYKEPTPIQAQGWPIAMSGKNLV 510
Y++PTPIQA P A+SG++++
Sbjct: 283 SEYEQPTPIQAMAIPSALSGRDVL 306
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 88.2 bits (209), Expect = 6e-18
Identities = 47/107 (43%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 694
++TGSGKTLA++LP HI +QP + GDGPIA++LAPTRELA Q + A F ++
Sbjct: 348 AKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLK 407
Query: 695 NTCVFGGAPKREQARDLERGVEMSLLL---QVD*LIFLEKGTTNLQR 826
C +GG EQ DL+RG E+ + +D L TNL+R
Sbjct: 408 VACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRR 454
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +1
Query: 265 FNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVKTM 441
F KNFY + + + EV+ YR + + +TV G++ PI+ + + + +K
Sbjct: 263 FKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKF 322
Query: 442 GYKEPTPIQAQGWPIAMSGKNLV 510
Y +PT IQAQ P MSG++++
Sbjct: 323 EYSKPTSIQAQAIPSIMSGRDVI 345
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 77.0 bits (181), Expect = 2e-14
Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 4/109 (3%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFGHT 682
++TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQI++ FG
Sbjct: 345 AETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKL 404
Query: 683 SYVRNTCVFGGAPKREQARDLERGVEMSLLLQVD*LIFLEKGTTNLQRC 829
++ V GGA + +Q L GVE+ + L LE L +C
Sbjct: 405 LGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYLLLNQC 453
Score = 60.5 bits (140), Expect = 1e-09
Identities = 25/60 (41%), Positives = 38/60 (63%)
Frame = +1
Query: 331 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 510
+R +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 72.9 bits (171), Expect = 3e-13
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 6/89 (6%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQ-PPIRRGD-----GPIALVLAPTRELAQQIQQVAADFG 676
SQTGSGKTLA++LPA++HI+ Q + D P LVL+PTRELAQQI+ +
Sbjct: 128 SQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYS 187
Query: 677 HTSYVRNTCVFGGAPKREQARDLERGVEM 763
+ Y ++ C++GG + EQ GVE+
Sbjct: 188 YNGY-KSVCLYGGGSRPEQVEACRGGVEI 215
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Frame = +1
Query: 247 FCLLQPFNKNFYDPHPTVLKRSPYEVEE-YRNKHEVTV------SGVEVHNPIQYFEEAN 405
F ++P ++ Y SP +++E Y N + V S V++ P+ FE+A
Sbjct: 30 FSWMKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAF 89
Query: 406 FPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLV 510
+ G ++ G+++P+PIQ+Q WP+ +SG++ +
Sbjct: 90 GSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCI 125
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 62.9 bits (146), Expect = 3e-10
Identities = 43/116 (37%), Positives = 60/116 (51%), Gaps = 11/116 (9%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQQVA 664
+QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A
Sbjct: 183 AQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEA 242
Query: 665 ADFGHTSYVRNTCVFGGAPK-REQARDLERGVEMSLLLQVD*LIFLEKGTTNLQRC 829
F + S ++ ++GG R+Q L G + + + +E+G L C
Sbjct: 243 TKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGC 298
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +1
Query: 325 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 504
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 120 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 178
Query: 505 LVA 513
L++
Sbjct: 179 LMS 181
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 62.9 bits (146), Expect = 3e-10
Identities = 43/116 (37%), Positives = 60/116 (51%), Gaps = 11/116 (9%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQQVA 664
+QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A
Sbjct: 167 AQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEA 226
Query: 665 ADFGHTSYVRNTCVFGGAPK-REQARDLERGVEMSLLLQVD*LIFLEKGTTNLQRC 829
F + S ++ ++GG R+Q L G + + + +E+G L C
Sbjct: 227 TKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGC 282
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +1
Query: 325 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 504
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 104 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 162
Query: 505 LVA 513
L++
Sbjct: 163 LMS 165
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 62.9 bits (146), Expect = 3e-10
Identities = 43/116 (37%), Positives = 60/116 (51%), Gaps = 11/116 (9%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQQVA 664
+QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A
Sbjct: 164 AQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEA 223
Query: 665 ADFGHTSYVRNTCVFGGAPK-REQARDLERGVEMSLLLQVD*LIFLEKGTTNLQRC 829
F + S ++ ++GG R+Q L G + + + +E+G L C
Sbjct: 224 TKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGC 279
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +1
Query: 325 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 504
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 101 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 159
Query: 505 LVA 513
L++
Sbjct: 160 LMS 162
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 56.4 bits (130), Expect = 2e-08
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 9/114 (7%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVAAD----F 673
+ TGSGKT+ ++LP ++ Q P R +GP L++ P+RELA+QI + +
Sbjct: 234 ASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEMFDAL 293
Query: 674 GHTSY--VRNTCVFGGAPKREQARDLERGVEMSLLLQVD*LIFLEKGTTNLQRC 829
G +R GG P EQA+D+ G+ + + L K NL+ C
Sbjct: 294 GKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEVC 347
Score = 41.5 bits (93), Expect = 7e-04
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +1
Query: 286 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 462
P + ++S + E R + ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 463 IQAQGWPIAMSGKNLV 510
IQ QG P+A+SG++++
Sbjct: 216 IQIQGIPVALSGRDMI 231
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 54.8 bits (126), Expect = 7e-08
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHT 682
+QTGSGKT A++LP + + + + G+G P ++L PTRELA QI F +
Sbjct: 385 AQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQ 444
Query: 683 SYVRNTCVFGGAPKREQARDLERGVEMSLLLQVD*LIFLEKGTTNLQRC 829
+ + V+GG +E+G + + F E+GT L +C
Sbjct: 445 TMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKC 493
Score = 36.3 bits (80), Expect = 0.027
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 379 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 513
P + F EAN + +Q+ V GY + TPIQ P+ G +++A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 54.8 bits (126), Expect = 7e-08
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHT 682
+QTGSGKT A++LP + + + + G+G P ++L PTRELA QI F +
Sbjct: 385 AQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQ 444
Query: 683 SYVRNTCVFGGAPKREQARDLERGVEMSLLLQVD*LIFLEKGTTNLQRC 829
+ + V+GG +E+G + + F E+GT L +C
Sbjct: 445 TMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKC 493
Score = 36.3 bits (80), Expect = 0.027
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 379 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 513
P + F EAN + +Q+ V GY + TPIQ P+ G +++A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 54.8 bits (126), Expect = 7e-08
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHT 682
+QTGSGKT A++LP + + + + G+G P ++L PTRELA QI F +
Sbjct: 385 AQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQ 444
Query: 683 SYVRNTCVFGGAPKREQARDLERGVEMSLLLQVD*LIFLEKGTTNLQRC 829
+ + V+GG +E+G + + F E+GT L +C
Sbjct: 445 TMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKC 493
Score = 36.3 bits (80), Expect = 0.027
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 379 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 513
P + F EAN + +Q+ V GY + TPIQ P+ G +++A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 54.4 bits (125), Expect = 9e-08
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHT 682
+QTGSGKT A++LP + + ++ + G+G P ++L PTREL QI F +
Sbjct: 596 AQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQ 655
Query: 683 SYVRNTCVFGGAPKREQARDLERGVEMSLLLQVD*LIFLEKGTTNLQRC 829
+ + V+GG +E+G + + F E+GT L +C
Sbjct: 656 TMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKC 704
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 513
F EAN + +++ V GY + TPIQ P+ G +++A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 54.4 bits (125), Expect = 9e-08
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHT 682
+QTGSGKT A++LP + + ++ + G+G P ++L PTREL QI F +
Sbjct: 596 AQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQ 655
Query: 683 SYVRNTCVFGGAPKREQARDLERGVEMSLLLQVD*LIFLEKGTTNLQRC 829
+ + V+GG +E+G + + F E+GT L +C
Sbjct: 656 TMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKC 704
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 513
F EAN + +++ V GY + TPIQ P+ G +++A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 54.4 bits (125), Expect = 9e-08
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHT 682
+QTGSGKT A++LP + + ++ + G+G P ++L PTREL QI F +
Sbjct: 596 AQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQ 655
Query: 683 SYVRNTCVFGGAPKREQARDLERGVEMSLLLQVD*LIFLEKGTTNLQRC 829
+ + V+GG +E+G + + F E+GT L +C
Sbjct: 656 TMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKC 704
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 513
F EAN + +++ V GY + TPIQ P+ G +++A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 53.6 bits (123), Expect = 2e-07
Identities = 31/84 (36%), Positives = 48/84 (57%)
Frame = +2
Query: 512 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 691
++Q+G+GKT + + + I+++ P + ALV+APTRELAQQIQ+V + G V
Sbjct: 72 QAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALGEYLNV 126
Query: 692 RNTCVFGGAPKREQARDLERGVEM 763
GG R+ R LE G+ +
Sbjct: 127 NILPCIGGTSVRDDQRKLEAGIHV 150
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 53.6 bits (123), Expect = 2e-07
Identities = 31/84 (36%), Positives = 48/84 (57%)
Frame = +2
Query: 512 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 691
++Q+G+GKT + + + I+++ P + ALV+APTRELAQQIQ+V + G V
Sbjct: 72 QAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALGEYLNV 126
Query: 692 RNTCVFGGAPKREQARDLERGVEM 763
GG R+ R LE G+ +
Sbjct: 127 NILPCIGGTSVRDDQRKLEAGIHV 150
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/85 (34%), Positives = 46/85 (54%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 694
S+TGSGKT A+++P + + R G AL+++PTRELA Q +V + G + +R
Sbjct: 68 SRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLR 123
Query: 695 NTCVFGGAPKREQARDLERGVEMSL 769
C+ GG EQ + ++ L
Sbjct: 124 CACLVGGDQIEEQFSTIHENPDILL 148
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 373 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 513
H +++ V + ++ G+ +PTPIQ + P M GK++VA
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/85 (34%), Positives = 46/85 (54%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 694
S+TGSGKT A+++P + + R G AL+++PTRELA Q +V + G + +R
Sbjct: 68 SRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLR 123
Query: 695 NTCVFGGAPKREQARDLERGVEMSL 769
C+ GG EQ + ++ L
Sbjct: 124 CACLVGGDQIEEQFSTIHENPDILL 148
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 373 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 513
H +++ V + ++ G+ +PTPIQ + P M GK++VA
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 50.0 bits (114), Expect = 2e-06
Identities = 32/106 (30%), Positives = 50/106 (47%)
Frame = +2
Query: 512 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 691
R++ G+GKT AY +P I I QP ++ A+V+ PTRELA Q Q+ + +
Sbjct: 86 RAKNGTGKTGAYCIPVIEKI--QPALKAIQ---AMVIVPTRELALQTSQICVELSKHIQL 140
Query: 692 RNTCVFGGAPKREQARDLERGVEMSLLLQVD*LIFLEKGTTNLQRC 829
+ GG R+ L V + + L +EKG ++ C
Sbjct: 141 KVMVTTGGTDLRDDIMRLNGTVHLVIATPGRILDLMEKGVAKMEHC 186
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 49.2 bits (112), Expect = 4e-06
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Frame = +2
Query: 512 RSQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 676
+++T +GKT A+ LP I I + R+ DGP+AL+LAPTRELA QI + +
Sbjct: 424 QAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHEALRTYC 483
Query: 677 HTSYVRNTCVFGGAPKREQARDLERGVEM 763
+ + +G + + ++ G ++
Sbjct: 484 QNTDIIVLLSYGQSDRARSLNEIRNGCDI 512
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 48.8 bits (111), Expect = 5e-06
Identities = 27/83 (32%), Positives = 50/83 (60%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 694
++TGSGKTLA++LPAI + ++ ++ +G ++++PTREL+ Q V ++ S +
Sbjct: 112 AKTGSGKTLAFLLPAI-ELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSELLEGSNLT 170
Query: 695 NTCVFGGAPKREQARDLERGVEM 763
V GG+ + + L +GV +
Sbjct: 171 YGLVMGGSNRSAEKDKLAKGVSI 193
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 48.4 bits (110), Expect = 6e-06
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADFGHT 682
+QTGSGKT A++LP + + + + G +G P ++L PTRELA QI F +
Sbjct: 342 AQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQ 401
Query: 683 SYVRNTCVFGGAPKREQARDLERGVEMSLLLQVD*LIFLEKGTTNLQRC 829
S + V+GG + +G + + F E G L +C
Sbjct: 402 SVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLDKC 450
Score = 35.9 bits (79), Expect = 0.036
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +1
Query: 379 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 513
P + F +++ P +++ V+ GY TPIQ P+ GK+++A
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 48.4 bits (110), Expect = 6e-06
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADFGHT 682
+QTGSGKT A++LP + + + + G +G P ++L PTRELA QI F +
Sbjct: 342 AQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQ 401
Query: 683 SYVRNTCVFGGAPKREQARDLERGVEMSLLLQVD*LIFLEKGTTNLQRC 829
S + V+GG + +G + + F E G L +C
Sbjct: 402 SVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLDKC 450
Score = 35.9 bits (79), Expect = 0.036
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +1
Query: 379 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 513
P + F +++ P +++ V+ GY TPIQ P+ GK+++A
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/77 (36%), Positives = 43/77 (55%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 694
++TG+GKTLA+ +P + ++ P G AL+L PTRELA QI + G ++
Sbjct: 133 ARTGTGKTLAFAIPILQKLSVDPY-----GIYALILTPTRELAFQIAEQFTALGKPITLK 187
Query: 695 NTCVFGGAPKREQARDL 745
+ + GG QAR+L
Sbjct: 188 CSVIVGGRSLIHQAREL 204
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/77 (36%), Positives = 43/77 (55%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 694
++TG+GKTLA+ +P + ++ P G AL+L PTRELA QI + G ++
Sbjct: 133 ARTGTGKTLAFAIPILQKLSVDPY-----GIYALILTPTRELAFQIAEQFTALGKPITLK 187
Query: 695 NTCVFGGAPKREQARDL 745
+ + GG QAR+L
Sbjct: 188 CSVIVGGRSLIHQAREL 204
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 46.4 bits (105), Expect = 3e-05
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 12/117 (10%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTRELAQQIQQV 661
+QTGSGKT A+++P + I P R+ P ALVL+PTREL+ QI
Sbjct: 210 AQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNE 269
Query: 662 AADFGHTSYVRNTCVFGGAPK-REQARDLERGVEMSLLLQVD*LIFLEKGTTNLQRC 829
+ F + + + + ++GG ++Q L G + + + +++G ++ C
Sbjct: 270 SRKFAYRTPITSALLYGGRENYKDQIHKLRLGCHILIATPGRLIDVMDQGLIGMEGC 326
Score = 46.0 bits (104), Expect = 3e-05
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +1
Query: 349 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 513
V +G +V PI F + + +++++ +KT GY PTP+Q P G++L++
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMS 208
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 44.4 bits (100), Expect = 1e-04
Identities = 28/81 (34%), Positives = 43/81 (53%)
Frame = +2
Query: 512 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 691
++Q+G+GKT + + + ++ Q +R AL+L+PTRELA QIQ+V G V
Sbjct: 69 QAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNV 123
Query: 692 RNTCVFGGAPKREQARDLERG 754
+ GG E R L+ G
Sbjct: 124 QCHACIGGTNLGEDIRKLDYG 144
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 44.4 bits (100), Expect = 1e-04
Identities = 28/81 (34%), Positives = 43/81 (53%)
Frame = +2
Query: 512 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 691
++Q+G+GKT + + + ++ Q +R AL+L+PTRELA QIQ+V G V
Sbjct: 69 QAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNV 123
Query: 692 RNTCVFGGAPKREQARDLERG 754
+ GG E R L+ G
Sbjct: 124 QCHACIGGTNLGEDIRKLDYG 144
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 43.6 bits (98), Expect = 2e-04
Identities = 28/67 (41%), Positives = 35/67 (52%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 694
S TGSGKTLA++LP + I N G AL+L+P+REL QI V F +
Sbjct: 53 SPTGSGKTLAFVLPMMRMIQNAKLQPADIG--ALILSPSRELCSQIVSVIQPFAEKLNLT 110
Query: 695 NTCVFGG 715
V GG
Sbjct: 111 VETVTGG 117
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 676
++TGSGKTLA+ +P + + + + GP AL++APTREL QI +
Sbjct: 33 AETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALI 92
Query: 677 HTSYVRNTCVFGGAPKREQAR 739
T+ + T + GG + +Q R
Sbjct: 93 STTQLIATSIVGGLAQVKQER 113
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 676
++TGSGKTLA+ +P + + + + GP AL++APTREL QI +
Sbjct: 200 AETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALI 259
Query: 677 HTSYVRNTCVFGGAPKREQAR 739
T+ + T + GG + +Q R
Sbjct: 260 STTQLIATSIVGGLAQVKQER 280
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPPIRRG-----DGPIALVLAPTRELAQQIQQVAADFGH 679
+ TGSGKTLA+++P ++ + + R P L++APTREL Q A +
Sbjct: 780 AHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTY 839
Query: 680 TSYVRNTCVFGGAPKREQARDLERGVEMSLLL 775
+ ++ FGG + + L ++++L+
Sbjct: 840 ETGLKCGLAFGGYSRNANVQHLRSFSQLNILV 871
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPPIRRG-----DGPIALVLAPTRELAQQIQQVAADFGH 679
+ TGSGKTLA+++P ++ + + R P L++APTREL Q A +
Sbjct: 780 AHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTY 839
Query: 680 TSYVRNTCVFGGAPKREQARDLERGVEMSLLL 775
+ ++ FGG + + L ++++L+
Sbjct: 840 ETGLKCGLAFGGYSRNANVQHLRSFSQLNILV 871
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/51 (39%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Frame = +2
Query: 512 RSQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQV 661
R++TGSGKT A+++P + + + G GP A+++APT+EL QI ++
Sbjct: 132 RARTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSAVIIAPTKELITQIYKL 182
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/79 (35%), Positives = 37/79 (46%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 694
++TGSGKT A+ +P + + + P LVL PTRELA QI Q G +
Sbjct: 88 AETGSGKTGAFAIPVLQSLLDHP-----QAFFCLVLTPTRELAFQIGQQFEALGSGIGLI 142
Query: 695 NTCVFGGAPKREQARDLER 751
+ GG QA L R
Sbjct: 143 AAVIVGGVDMAAQAMALAR 161
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 38.7 bits (86), Expect = 0.005
Identities = 26/81 (32%), Positives = 38/81 (46%)
Frame = +2
Query: 521 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 700
TG+GKT A++LP + + +P + LVL PTRELA Q+ QV +
Sbjct: 194 TGTGKTAAFVLPILERMIYRP--KGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVC 251
Query: 701 CVFGGAPKREQARDLERGVEM 763
GG + Q L G ++
Sbjct: 252 LCAGGLDLKAQEAALRSGPDV 272
Score = 36.7 bits (81), Expect = 0.020
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 513
FE+ N + + GY +PTPIQ P+A++GK++ A
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICA 190
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = +2
Query: 521 TGSGKTLAYILPA---IVHINNQPPIRRGDGP--IALVLAPTRELAQQ 649
TGSGKTLA+ LP I+ + + + +A+VL PTRELA Q
Sbjct: 172 TGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 33.9 bits (74), Expect = 0.14
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +2
Query: 512 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 676
++Q+G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 254 QAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 303
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 33.9 bits (74), Expect = 0.14
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +2
Query: 512 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 676
++Q+G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 279 QAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 328
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 33.9 bits (74), Expect = 0.14
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +2
Query: 512 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 676
++Q+G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 663 QAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 712
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 33.5 bits (73), Expect = 0.19
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 521 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 700
TGSGKT+ Y+LP + + ++P A++L P + L QI + S V
Sbjct: 165 TGSGKTICYVLPVLAAVGSKP----SKILQAVILVPVQTLVAQIVDEFKRWNDESGVAKV 220
Query: 701 CVFGGAPKRE-QARDL 745
GA E +AR L
Sbjct: 221 VSLSGANDFEKEARQL 236
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 649
++TGSGKTLA ++P ++ + G AL+++PTRELA Q
Sbjct: 120 AKTGSGKTLALVIP-VLEALWRAKWSPDYGLGALIISPTRELALQ 163
>AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical
protein Y71F9B.14 protein.
Length = 430
Score = 32.7 bits (71), Expect = 0.33
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -2
Query: 749 SPSPGLALF*EHHQTHTCYEHKMCVQNLQQLAEFVVL 639
+P PGL L +HH +HT +H +C+Q + A VL
Sbjct: 18 NPKPGLILG-DHHISHTINQHHLCIQKKRLKAGTTVL 53
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 31.5 bits (68), Expect = 0.77
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +2
Query: 521 TGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTRELAQQI 652
TG GKT A+++PAI + + +P I P L+LA T L +Q+
Sbjct: 138 TGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQL 185
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/80 (23%), Positives = 43/80 (53%)
Frame = +2
Query: 512 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 691
++++G+GKTL + + A+ ++++ R +++ PTRE++ QI++ T
Sbjct: 65 QAKSGTGKTLVFSVLAVENLDS-----RSSHIQKVIVTPTREISVQIKETVRKVAPTG-A 118
Query: 692 RNTCVFGGAPKREQARDLER 751
R + GG+ + DL++
Sbjct: 119 RTSVYVGGSAHKLNLIDLKQ 138
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/80 (23%), Positives = 43/80 (53%)
Frame = +2
Query: 512 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 691
++++G+GKTL + + A+ ++++ R +++ PTRE++ QI++ T
Sbjct: 65 QAKSGTGKTLVFSVLAVENLDS-----RSSHIQKVIVTPTREISVQIKETVRKVAPTG-A 118
Query: 692 RNTCVFGGAPKREQARDLER 751
R + GG+ + DL++
Sbjct: 119 RTSVYVGGSAHKLNLIDLKQ 138
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 7 PASERIHSLNKHLQLNPKNNHVW 75
PAS ++H L++ LQLN N+ W
Sbjct: 773 PASHQLHCLSRALQLNKANDSAW 795
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 93 VETVVPNLEEATNSAIIRLGLATVAIDLEDLEALVGKKN 209
+ETV+ LE N +RL A VA E LE++ GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 521 TGSGKTLAYILPAIVH 568
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis
zeste white 10 (drosophila) homolog protein 1 protein.
Length = 778
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 654 SKLLQILDTHLMFVTRVCLVVLLKESK 734
+KLL LDT +FVTR C ++ K +K
Sbjct: 372 AKLLFTLDTDTIFVTRRCFAIVSKANK 398
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -1
Query: 504 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 325
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 324 D 322
+
Sbjct: 86 N 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -1
Query: 504 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 325
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 324 D 322
+
Sbjct: 86 N 86
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 148 RRIIAEFVASSKFGTTVSTAIIPV 77
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 148 RRIIAEFVASSKFGTTVSTAIIPV 77
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/65 (27%), Positives = 32/65 (49%)
Frame = +2
Query: 512 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 691
+SQ GSGKT+ ++ + I+ + + ++LAP R +AQ+ + G V
Sbjct: 39 QSQAGSGKTVISLIDILQGIDCEDAHLQ-----VILLAPQRGMAQRAHEQLKSLGRNLNV 93
Query: 692 RNTCV 706
TC+
Sbjct: 94 NATCL 98
>U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical
protein B0361.10 protein.
Length = 201
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 453 TDAHSSSRLADSYVWKEFSGVAKRVPAKRWP 545
TDA R+A S++ + RVPA +WP
Sbjct: 83 TDAEYQQRVAMSFLGRVLDDFTTRVPATQWP 113
>U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation
factor-2 kinase EFK-1B isoform protein.
Length = 760
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -3
Query: 241 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPVTRHDY 62
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 647 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 706
Query: 61 FSDLVEDVYLNYGFFLTQ 8
+ + E +Y G+ L Q
Sbjct: 707 LAKMAE-MYKEGGYGLNQ 723
>U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation
factor-2 kinase EFK-1A isoform protein.
Length = 768
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -3
Query: 241 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPVTRHDY 62
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 655 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 714
Query: 61 FSDLVEDVYLNYGFFLTQ 8
+ + E +Y G+ L Q
Sbjct: 715 LAKMAE-MYKEGGYGLNQ 731
>U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation factor
kinase protein1, isoform a protein.
Length = 768
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -3
Query: 241 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPVTRHDY 62
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 655 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 714
Query: 61 FSDLVEDVYLNYGFFLTQ 8
+ + E +Y G+ L Q
Sbjct: 715 LAKMAE-MYKEGGYGLNQ 731
>U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation factor
kinase protein1, isoform b protein.
Length = 760
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -3
Query: 241 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPVTRHDY 62
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 647 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 706
Query: 61 FSDLVEDVYLNYGFFLTQ 8
+ + E +Y G+ L Q
Sbjct: 707 LAKMAE-MYKEGGYGLNQ 723
>Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical
protein F15D4.1 protein.
Length = 1529
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 183 LEALVGKKNSLEGRTCDAQIGILFTPTFQQK 275
LEAL ++G+ D + +LF P FQ K
Sbjct: 470 LEALYESDGEIQGQRIDIAVQLLFIPFFQSK 500
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 286 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 444
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 286 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 444
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
>Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical
protein F15D4.1 protein.
Length = 1529
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 183 LEALVGKKNSLEGRTCDAQIGILFTPTFQQK 275
LEAL ++G+ D + +LF P FQ K
Sbjct: 470 LEALYESDGEIQGQRIDIAVQLLFIPFFQSK 500
>Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical
protein T21C9.6 protein.
Length = 1215
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 253 LLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPI 384
LL+ FN+ Y+ PT L + +E+YR + + G+ NP+
Sbjct: 169 LLKSFNE-IYNDKPTALIENLKTIEKYRKGNVLNQMGLRHRNPL 211
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,293,574
Number of Sequences: 27780
Number of extensions: 433402
Number of successful extensions: 1320
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 1171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1269
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -