Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021836
(802 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 153 7e-36
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 149 1e-34
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 136 5e-31
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 133 4e-30
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 126 9e-28
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 124 3e-27
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 122 8e-27
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 121 2e-26
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 120 3e-26
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 109 8e-23
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;... 109 1e-22
UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68; ... 108 2e-22
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 106 6e-22
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 106 6e-22
UniRef50_Q17BQ3 Cluster: Putative uncharacterized protein; n=1; ... 105 2e-21
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 103 4e-21
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 101 2e-20
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 96 8e-19
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 96 8e-19
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 95 2e-18
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 93 6e-18
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 93 6e-18
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 93 6e-18
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 93 7e-18
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 92 1e-17
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 92 2e-17
UniRef50_Q4TEE5 Cluster: Chromosome undetermined SCAF5464, whole... 91 3e-17
UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3; ... 91 3e-17
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 91 3e-17
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 90 5e-17
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 90 5e-17
UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genom... 89 9e-17
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 89 9e-17
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 89 1e-16
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 89 1e-16
UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1; Ostreo... 89 2e-16
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 89 2e-16
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 89 2e-16
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 88 2e-16
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 88 3e-16
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 87 4e-16
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 87 4e-16
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 87 4e-16
UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family pr... 87 5e-16
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 87 5e-16
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 87 5e-16
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 86 1e-15
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 85 1e-15
UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helic... 85 2e-15
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 85 2e-15
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 85 2e-15
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 84 5e-15
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 84 5e-15
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 84 5e-15
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 84 5e-15
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 83 6e-15
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic... 83 8e-15
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 82 2e-14
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 81 3e-14
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 81 3e-14
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 80 6e-14
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 80 7e-14
UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 80 7e-14
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 79 1e-13
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 79 2e-13
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 78 2e-13
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 77 4e-13
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 77 4e-13
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 77 5e-13
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 77 7e-13
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 77 7e-13
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 77 7e-13
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 76 9e-13
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 76 9e-13
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 76 9e-13
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 76 1e-12
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 75 2e-12
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 75 2e-12
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 75 2e-12
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 75 3e-12
UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2; ... 75 3e-12
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 74 4e-12
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 74 5e-12
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 74 5e-12
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 73 6e-12
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 73 1e-11
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 73 1e-11
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 72 1e-11
UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 72 2e-11
UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 71 3e-11
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 71 3e-11
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 71 3e-11
UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein p... 71 3e-11
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 71 5e-11
UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, wh... 71 5e-11
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 70 6e-11
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 70 6e-11
UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2; F... 70 6e-11
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 70 8e-11
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh... 70 8e-11
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 70 8e-11
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 69 1e-10
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 69 1e-10
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 68 3e-10
UniRef50_UPI0000498E70 Cluster: DEAD/DEAH box helicase; n=1; Ent... 67 4e-10
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 67 4e-10
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 67 4e-10
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 67 4e-10
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 67 6e-10
UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. ... 67 6e-10
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 67 6e-10
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 67 6e-10
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 66 7e-10
UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA hel... 66 7e-10
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 66 7e-10
UniRef50_Q4SWK6 Cluster: Chromosome 12 SCAF13614, whole genome s... 66 1e-09
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 66 1e-09
UniRef50_Q752X1 Cluster: AFR452Cp; n=1; Eremothecium gossypii|Re... 66 1e-09
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 66 1e-09
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 65 2e-09
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 65 2e-09
UniRef50_Q240I5 Cluster: DEAD/DEAH box helicase family protein; ... 65 2e-09
UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;... 65 2e-09
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 65 2e-09
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 64 3e-09
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 64 3e-09
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 64 3e-09
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 64 3e-09
UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;... 64 3e-09
UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101, w... 64 3e-09
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 64 3e-09
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 64 4e-09
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 64 4e-09
UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Re... 64 4e-09
UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVL... 64 4e-09
UniRef50_P23394 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 64 4e-09
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 64 5e-09
UniRef50_UPI00006CB2CD Cluster: DEAD/DEAH box helicase family pr... 64 5e-09
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 64 5e-09
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 64 5e-09
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 64 5e-09
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 64 5e-09
UniRef50_A2D755 Cluster: DEAD/DEAH box helicase family protein; ... 64 5e-09
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 64 5e-09
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 63 7e-09
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 63 7e-09
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 63 7e-09
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 63 7e-09
UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 63 7e-09
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 63 7e-09
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 63 9e-09
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 63 9e-09
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 62 1e-08
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 62 1e-08
UniRef50_UPI0000E47F75 Cluster: PREDICTED: similar to DEAD (Asp-... 62 2e-08
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 62 2e-08
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 62 2e-08
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 62 2e-08
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 62 2e-08
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 62 2e-08
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 62 2e-08
UniRef50_P36120 Cluster: ATP-dependent RNA helicase DBP7; n=5; S... 62 2e-08
UniRef50_UPI0000F1E5FF Cluster: PREDICTED: similar to Pl10, part... 61 3e-08
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 61 3e-08
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 61 3e-08
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 61 3e-08
UniRef50_Q86B47 Cluster: CG8611-PB, isoform B; n=2; Drosophila m... 61 3e-08
UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 - Lei... 61 3e-08
UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, wh... 61 3e-08
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 61 3e-08
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 61 4e-08
UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1; Ostre... 61 4e-08
UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putativ... 61 4e-08
UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=... 61 4e-08
UniRef50_A2E5C2 Cluster: DEAD/DEAH box helicase family protein; ... 61 4e-08
UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1; ... 61 4e-08
UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX... 61 4e-08
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 61 4e-08
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 60 5e-08
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 60 5e-08
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 60 5e-08
UniRef50_A7PDS5 Cluster: Chromosome chr11 scaffold_13, whole gen... 60 5e-08
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 60 5e-08
UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1; Dug... 60 5e-08
UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, wh... 60 5e-08
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 60 5e-08
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 60 6e-08
UniRef50_Q5ENJ0 Cluster: Chloroplast RNA helicase; n=1; Heteroca... 60 6e-08
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 60 6e-08
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 60 6e-08
UniRef50_O60173 Cluster: ATP-dependent RNA helicase dbp7; n=1; S... 60 6e-08
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 60 6e-08
UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1; U... 60 6e-08
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 60 8e-08
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 60 8e-08
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 60 8e-08
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 60 8e-08
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 60 8e-08
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 60 8e-08
UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein; ... 60 8e-08
UniRef50_A7AM30 Cluster: RNA helicase family protein; n=1; Babes... 60 8e-08
UniRef50_A6RSH5 Cluster: Putative uncharacterized protein; n=2; ... 60 8e-08
UniRef50_Q9H8H2 Cluster: Probable ATP-dependent RNA helicase DDX... 60 8e-08
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 59 1e-07
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 59 1e-07
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 59 1e-07
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 59 1e-07
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 59 1e-07
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 59 1e-07
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 59 1e-07
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 59 1e-07
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 59 1e-07
UniRef50_A4S507 Cluster: Predicted protein; n=2; Ostreococcus|Re... 59 1e-07
UniRef50_Q39189 Cluster: DEAD-box ATP-dependent RNA helicase 7; ... 59 1e-07
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 59 1e-07
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 59 1e-07
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 59 1e-07
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 59 1e-07
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 59 1e-07
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 58 2e-07
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 58 2e-07
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 58 2e-07
UniRef50_Q7XJN0 Cluster: DEAD-box ATP-dependent RNA helicase 17;... 58 2e-07
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino... 58 3e-07
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 58 3e-07
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 58 3e-07
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 58 3e-07
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 58 3e-07
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 58 3e-07
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 58 3e-07
UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 58 3e-07
UniRef50_Q6C835 Cluster: ATP-dependent RNA helicase DBP7; n=1; Y... 58 3e-07
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 58 3e-07
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 58 3e-07
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 58 3e-07
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 58 3e-07
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 58 3e-07
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 58 3e-07
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 58 3e-07
UniRef50_Q3LWF0 Cluster: ATP-dependent RNA helicase; n=1; Bigelo... 58 3e-07
UniRef50_Q7RFI2 Cluster: Drosophila melanogaster BcDNA.GH02833; ... 58 3e-07
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 58 3e-07
UniRef50_A7SVK2 Cluster: Predicted protein; n=1; Nematostella ve... 58 3e-07
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 58 3e-07
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 58 3e-07
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 58 3e-07
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 58 3e-07
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 58 3e-07
UniRef50_A5DAR2 Cluster: ATP-dependent RNA helicase DBP7; n=2; P... 58 3e-07
UniRef50_Q5KAI2 Cluster: ATP-dependent RNA helicase DBP7; n=1; F... 58 3e-07
UniRef50_UPI0000E49031 Cluster: PREDICTED: similar to DEAD/DEXH ... 57 4e-07
UniRef50_Q6MN90 Cluster: RNA helicase; n=1; Bdellovibrio bacteri... 57 4e-07
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 57 4e-07
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 57 4e-07
UniRef50_Q234J0 Cluster: DEAD/DEAH box helicase family protein; ... 57 4e-07
UniRef50_A5KC62 Cluster: DEAD/DEAH box helicase, putative; n=10;... 57 4e-07
UniRef50_Q5VRY0 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 57 4e-07
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 57 4e-07
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 57 4e-07
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 57 6e-07
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 57 6e-07
UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5; Tr... 57 6e-07
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 57 6e-07
UniRef50_A7U5X0 Cluster: DEAD-box helicase 10; n=2; Plasmodium f... 57 6e-07
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 57 6e-07
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 57 6e-07
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 56 8e-07
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 56 8e-07
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 56 8e-07
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 56 8e-07
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 56 8e-07
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 56 8e-07
UniRef50_A7QRK7 Cluster: Chromosome undetermined scaffold_151, w... 56 8e-07
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 56 8e-07
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 56 8e-07
UniRef50_A7SJ72 Cluster: Predicted protein; n=1; Nematostella ve... 56 8e-07
UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 56 8e-07
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 56 8e-07
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 56 8e-07
UniRef50_Q9NUL7 Cluster: Probable ATP-dependent RNA helicase DDX... 56 8e-07
UniRef50_Q0UHM7 Cluster: ATP-dependent RNA helicase DBP7; n=1; P... 56 8e-07
UniRef50_Q4HZ68 Cluster: ATP-dependent RNA helicase DBP7; n=1; G... 56 8e-07
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 56 1e-06
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 56 1e-06
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 56 1e-06
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 56 1e-06
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 56 1e-06
UniRef50_Q56X76 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 56 1e-06
UniRef50_A3LWH3 Cluster: ATP-dependent RNA helicase DBP7; n=2; S... 56 1e-06
UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;... 56 1e-06
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 56 1e-06
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 56 1e-06
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 56 1e-06
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 56 1e-06
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 56 1e-06
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 56 1e-06
UniRef50_Q58HG3 Cluster: DEAD-box RNA helicase; n=4; Eukaryota|R... 56 1e-06
UniRef50_Q16YP8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 56 1e-06
UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11; Plasmodium|... 56 1e-06
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 56 1e-06
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 56 1e-06
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 55 2e-06
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 55 2e-06
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 55 2e-06
UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14; Eume... 55 2e-06
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 55 2e-06
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 55 2e-06
UniRef50_Q9W3Y5 Cluster: Putative ATP-dependent RNA helicase CG1... 55 2e-06
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 55 2e-06
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 55 2e-06
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 55 2e-06
UniRef50_Q803D3 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 55 2e-06
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 55 2e-06
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 55 2e-06
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 55 2e-06
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 55 2e-06
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 55 2e-06
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 55 2e-06
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 55 2e-06
UniRef50_Q5CR74 Cluster: Dbp7p, eIF4A-a-family RNA SFII helicase... 55 2e-06
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 55 2e-06
UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicas... 55 2e-06
UniRef50_A1IIT4 Cluster: RNA helicase; n=1; Neobenedenia girella... 55 2e-06
UniRef50_A4QX49 Cluster: ATP-dependent RNA helicase DBP7; n=1; M... 55 2e-06
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 54 3e-06
UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;... 54 3e-06
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 54 3e-06
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 54 3e-06
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 54 3e-06
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 54 3e-06
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 54 3e-06
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 54 3e-06
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 54 3e-06
UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n... 54 3e-06
UniRef50_Q0U210 Cluster: Putative uncharacterized protein; n=1; ... 54 3e-06
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 54 3e-06
UniRef50_Q7S873 Cluster: ATP-dependent RNA helicase dbp-7; n=2; ... 54 3e-06
UniRef50_Q754J2 Cluster: ATP-dependent RNA helicase DBP7; n=1; E... 54 3e-06
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 54 4e-06
UniRef50_Q9RXH8 Cluster: ATP-dependent RNA helicase, putative; n... 54 4e-06
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 54 4e-06
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 54 4e-06
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 54 4e-06
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 54 4e-06
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 54 4e-06
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 54 4e-06
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 54 4e-06
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 54 4e-06
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 54 4e-06
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 54 4e-06
UniRef50_Q7QUN8 Cluster: GLP_47_37459_39102; n=1; Giardia lambli... 54 4e-06
UniRef50_Q2H4C0 Cluster: Putative uncharacterized protein; n=1; ... 54 4e-06
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 54 4e-06
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 54 4e-06
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 54 4e-06
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 54 4e-06
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 54 6e-06
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 54 6e-06
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 54 6e-06
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 54 6e-06
UniRef50_Q9AW79 Cluster: Putative RNA-dependent helicase; n=1; G... 54 6e-06
UniRef50_Q4DJM0 Cluster: ATP-dependent RNA helicase, putative; n... 54 6e-06
UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep: ... 54 6e-06
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 53 7e-06
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 53 7e-06
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 53 7e-06
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 53 7e-06
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 53 7e-06
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 53 7e-06
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 53 7e-06
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 53 7e-06
UniRef50_A2E9Y0 Cluster: DEAD/DEAH box helicase family protein; ... 53 7e-06
UniRef50_Q0CX32 Cluster: DEAD-box protein 3; n=11; Pezizomycotin... 53 7e-06
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 53 7e-06
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 53 7e-06
UniRef50_UPI0000D55FA1 Cluster: PREDICTED: similar to CG3561-PA;... 53 1e-05
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 53 1e-05
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 53 1e-05
UniRef50_Q4N7J8 Cluster: DEAD box RNA helicase, putative; n=2; T... 53 1e-05
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 53 1e-05
UniRef50_Q4P0Y5 Cluster: ATP-dependent RNA helicase DBP7; n=1; U... 53 1e-05
UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p; ... 52 1e-05
UniRef50_UPI00015B5BA9 Cluster: PREDICTED: similar to RE48840p; ... 52 1e-05
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 52 1e-05
UniRef50_UPI00003937F7 Cluster: COG0513: Superfamily II DNA and ... 52 1e-05
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 52 1e-05
UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=... 52 1e-05
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 52 1e-05
UniRef50_Q015I7 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 52 1e-05
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 52 1e-05
UniRef50_Q869P0 Cluster: Similar to Homo sapiens (Human). DEAD/D... 52 1e-05
UniRef50_Q7R388 Cluster: GLP_111_80478_82724; n=1; Giardia lambl... 52 1e-05
UniRef50_Q23WN3 Cluster: Helicase conserved C-terminal domain co... 52 1e-05
UniRef50_A2DEZ7 Cluster: DEAD/DEAH box helicase family protein; ... 52 1e-05
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 52 1e-05
UniRef50_A4QQK0 Cluster: Putative uncharacterized protein; n=3; ... 52 1e-05
UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14; ... 52 1e-05
UniRef50_UPI0000E48927 Cluster: PREDICTED: similar to DEAD box A... 42 2e-05
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 52 2e-05
UniRef50_Q8A8L3 Cluster: ATP-independent RNA helicase; n=7; Bact... 52 2e-05
UniRef50_Q88XN5 Cluster: ATP-dependent RNA helicase; n=2; Lactob... 52 2e-05
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 52 2e-05
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 52 2e-05
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 52 2e-05
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 52 2e-05
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 52 2e-05
UniRef50_A4RXR7 Cluster: Predicted protein; n=3; Ostreococcus|Re... 52 2e-05
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 52 2e-05
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 52 2e-05
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 52 2e-05
UniRef50_Q0CMM5 Cluster: Putative uncharacterized protein; n=2; ... 52 2e-05
UniRef50_UPI00006CBDDC Cluster: DEAD/DEAH box helicase family pr... 52 2e-05
UniRef50_UPI0000498886 Cluster: DEAD/DEAH box helicase; n=1; Ent... 52 2e-05
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 52 2e-05
UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 52 2e-05
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 52 2e-05
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 52 2e-05
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 52 2e-05
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 52 2e-05
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 52 2e-05
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 52 2e-05
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 52 2e-05
UniRef50_A0CUN8 Cluster: Chromosome undetermined scaffold_28, wh... 52 2e-05
UniRef50_Q1E273 Cluster: Putative uncharacterized protein; n=2; ... 52 2e-05
UniRef50_A6SDG8 Cluster: Putative uncharacterized protein; n=1; ... 52 2e-05
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 52 2e-05
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 52 2e-05
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 52 2e-05
UniRef50_Q6BKH3 Cluster: ATP-dependent RNA helicase DBP7; n=2; S... 52 2e-05
UniRef50_Q0CF43 Cluster: ATP-dependent RNA helicase dbp7; n=10; ... 52 2e-05
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 51 3e-05
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 51 3e-05
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 51 3e-05
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 51 3e-05
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 51 3e-05
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 51 3e-05
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 51 3e-05
UniRef50_P90897 Cluster: Putative uncharacterized protein; n=2; ... 51 3e-05
UniRef50_A0DK92 Cluster: Chromosome undetermined scaffold_54, wh... 51 3e-05
UniRef50_A7ETZ1 Cluster: Putative uncharacterized protein; n=1; ... 51 3e-05
UniRef50_Q8GUG7 Cluster: DEAD-box ATP-dependent RNA helicase 50;... 51 3e-05
UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4; ... 51 3e-05
UniRef50_Q5KMS9 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 51 3e-05
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 51 4e-05
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 51 4e-05
UniRef50_Q1U8H0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 51 4e-05
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 51 4e-05
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 51 4e-05
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 51 4e-05
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 51 4e-05
UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2; ... 51 4e-05
UniRef50_A2YDM1 Cluster: Putative uncharacterized protein; n=2; ... 51 4e-05
UniRef50_Q4QJE3 Cluster: ATP-dependent RNA helicase, putative; n... 51 4e-05
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 51 4e-05
UniRef50_A0DXN3 Cluster: Chromosome undetermined scaffold_69, wh... 51 4e-05
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 51 4e-05
UniRef50_Q5KDK3 Cluster: ATP-dependent RNA helicase ROK1; n=2; F... 51 4e-05
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 51 4e-05
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 51 4e-05
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 51 4e-05
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 50 5e-05
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 50 5e-05
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 50 5e-05
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 50 5e-05
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 50 5e-05
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 50 5e-05
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 50 5e-05
UniRef50_A2EPC6 Cluster: Type III restriction enzyme, res subuni... 50 5e-05
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 50 5e-05
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 50 5e-05
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 50 5e-05
UniRef50_UPI00006CA44F Cluster: DEAD/DEAH box helicase family pr... 50 7e-05
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 50 7e-05
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 50 7e-05
UniRef50_Q4N0E9 Cluster: ATP-dependent RNA helicase, putative; n... 50 7e-05
UniRef50_Q4D7K2 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 50 7e-05
UniRef50_Q389T9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 50 7e-05
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 50 7e-05
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 50 7e-05
UniRef50_Q4WRP2 Cluster: ATP-dependent RNA helicase mss116, mito... 50 7e-05
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 50 7e-05
UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1; F... 50 7e-05
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;... 50 9e-05
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 50 9e-05
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 50 9e-05
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 50 9e-05
UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5; T... 50 9e-05
UniRef50_A7RQ16 Cluster: Predicted protein; n=1; Nematostella ve... 50 9e-05
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 50 9e-05
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 50 9e-05
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 50 9e-05
UniRef50_UPI00015B6103 Cluster: PREDICTED: similar to CG8611-PB;... 49 1e-04
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 49 1e-04
UniRef50_Q8AYI1 Cluster: Vasa-like protein; n=1; Squalus acanthi... 49 1e-04
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 49 1e-04
UniRef50_Q08BL1 Cluster: Zgc:153386; n=2; Danio rerio|Rep: Zgc:1... 49 1e-04
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 49 1e-04
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 49 1e-04
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 49 1e-04
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 49 1e-04
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 153 bits (370), Expect = 7e-36
Identities = 70/84 (83%), Positives = 78/84 (92%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
VAQTGSGKTLAY+LPA+VHINNQP + RGDGPIALVLAPTRELAQQIQQVA +FG ++V
Sbjct: 200 VAQTGSGKTLAYVLPAVVHINNQPRLERGDGPIALVLAPTRELAQQIQQVAIEFGSNTHV 259
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
RNTC+FGGAPK +QARDLERGVEI
Sbjct: 260 RNTCIFGGAPKGQQARDLERGVEI 283
Score = 95.9 bits (228), Expect = 1e-18
Identities = 42/85 (49%), Positives = 57/85 (67%)
Frame = +2
Query: 254 IQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 433
+ PF KNFY P +VL R+ E E + ++E+T+ G +V P FEE FPDYV ++
Sbjct: 114 LTPFRKNFYKPCDSVLARTVGETETFLTSNEITIKGDQVPTPSIEFEEGGFPDYVMNEIR 173
Query: 434 TMGYKEPTPIQAQGWPIAMSGKNLV 508
G+ +PT IQAQGWPIAMSG++LV
Sbjct: 174 KQGFAKPTAIQAQGWPIAMSGRDLV 198
>UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9;
Eukaryota|Rep: ATP-dependent RNA helicase p62 -
Drosophila melanogaster (Fruit fly)
Length = 719
Score = 149 bits (360), Expect = 1e-34
Identities = 70/87 (80%), Positives = 77/87 (88%)
Frame = +1
Query: 502 FSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHT 681
F +A+TGSGKTL YILPAIVHINNQ P++RGDGPIALVLAPTRELAQQIQQVA +FG +
Sbjct: 321 FVGIAKTGSGKTLGYILPAIVHINNQQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSS 380
Query: 682 SYVRNTCVFGGAPKREQARDLERGVEI 762
SYVRNTCVFGGAPK Q RDL+RG EI
Sbjct: 381 SYVRNTCVFGGAPKGGQMRDLQRGCEI 407
Score = 116 bits (279), Expect = 7e-25
Identities = 52/88 (59%), Positives = 60/88 (68%)
Frame = +2
Query: 245 FCFIQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQ 424
F + PF KNFY HP V RSPYEV+ YR E+TV G +V NPIQ F E + PDYV +
Sbjct: 236 FSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRG-QVPNPIQDFSEVHLPDYVMK 294
Query: 425 GVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
++ GYK PT IQAQGWPIAMSG N V
Sbjct: 295 EIRRQGYKAPTAIQAQGWPIAMSGSNFV 322
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 136 bits (330), Expect = 5e-31
Identities = 67/108 (62%), Positives = 77/108 (71%)
Frame = +1
Query: 439 GLQRTDAYSSSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 618
G + A + + + ++ +AQTGSGKTLAYI PA+VHI +Q +RRGDGPIALV
Sbjct: 141 GFSKPTAIQAQGMPIALSGRDMVGIAQTGSGKTLAYIAPALVHITHQDQLRRGDGPIALV 200
Query: 619 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
LAPTRELAQQIQQVA DFG NTCVFGGAPK Q RDLERG EI
Sbjct: 201 LAPTRELAQQIQQVATDFGQRINANNTCVFGGAPKGPQIRDLERGAEI 248
Score = 74.1 bits (174), Expect = 4e-12
Identities = 32/85 (37%), Positives = 49/85 (57%)
Frame = +2
Query: 254 IQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 433
+ PF K+FY P + S +V+ Y E+T+ G + P FE+ PDY+ +
Sbjct: 79 LTPFEKDFYKPSEFISNLSETDVKGYLAKLEITLKGRNIPRPSMEFEQGGLPDYILEEAN 138
Query: 434 TMGYKEPTPIQAQGWPIAMSGKNLV 508
G+ +PT IQAQG PIA+SG+++V
Sbjct: 139 KQGFSKPTAIQAQGMPIALSGRDMV 163
>UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 718
Score = 133 bits (322), Expect = 4e-30
Identities = 62/84 (73%), Positives = 70/84 (83%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+A+TGSGKTLAYILPA++HI+NQP + RGDGPIALVLAPTRELAQQIQQV DFG +
Sbjct: 144 IAKTGSGKTLAYILPALIHISNQPRLLRGDGPIALVLAPTRELAQQIQQVCNDFGRRMSI 203
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
NTC+FGGA K QA DL RGVEI
Sbjct: 204 MNTCIFGGASKHPQADDLRRGVEI 227
Score = 80.6 bits (190), Expect = 4e-14
Identities = 37/85 (43%), Positives = 55/85 (64%)
Frame = +2
Query: 254 IQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 433
++PF K+F+ P +VL+RS EV +Y + +E+T+ G V PI F E+ FP +
Sbjct: 58 LEPFKKDFFTPASSVLERSRTEVCQYLDKNEITMIGKNVPAPIMQFGESGFPSVFLDEMG 117
Query: 434 TMGYKEPTPIQAQGWPIAMSGKNLV 508
G++EPT IQA GW IAMSG+++V
Sbjct: 118 RQGFQEPTSIQAVGWSIAMSGRDMV 142
>UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5;
Eukaryota|Rep: Ethylene-responsive RNA helicase -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 474
Score = 126 bits (303), Expect = 9e-28
Identities = 56/84 (66%), Positives = 69/84 (82%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+A+TGSGKT+AY+LPAIVH+N QP + GDGPI LVLAPTRELA QIQQ A FG +S +
Sbjct: 139 IAETGSGKTIAYLLPAIVHVNAQPILDHGDGPIVLVLAPTRELAVQIQQEATKFGASSRI 198
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
+NTC++GG PK Q RDL++GVEI
Sbjct: 199 KNTCIYGGVPKGPQVRDLQKGVEI 222
Score = 100 bits (240), Expect = 4e-20
Identities = 41/85 (48%), Positives = 58/85 (68%)
Frame = +2
Query: 254 IQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 433
+ PF KNFY P++ + EVEEYR E+T+ G +V PI+ F + FPDYV Q ++
Sbjct: 53 LPPFEKNFYVESPSIAAMTEGEVEEYRRRREITIEGRDVPKPIKSFHDVGFPDYVLQEIE 112
Query: 434 TMGYKEPTPIQAQGWPIAMSGKNLV 508
G+ EPTPIQAQGWP+A+ G++L+
Sbjct: 113 KAGFTEPTPIQAQGWPMALKGRDLI 137
>UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 639
Score = 124 bits (299), Expect = 3e-27
Identities = 55/84 (65%), Positives = 70/84 (83%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+A+TGSGKTL+Y+LPA++HI+ Q +RRGDGPIAL+LAPTRELAQQI+QV DFG +
Sbjct: 130 IAKTGSGKTLSYLLPALMHIDQQSRLRRGDGPIALILAPTRELAQQIKQVTDDFGRAMKI 189
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
+NTC+FGG KR+Q DL+ GVEI
Sbjct: 190 KNTCLFGGGAKRQQGDDLKYGVEI 213
Score = 68.5 bits (160), Expect = 2e-10
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = +2
Query: 302 KRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWP 481
+RS E+ E+R E+T G +V +P FEE FP + + + PTPIQ+QGWP
Sbjct: 60 RRSEREISEWRKTKEITTKGRDVPDPALTFEEVGFPAEIADEWRYAEFTTPTPIQSQGWP 119
Query: 482 IAMSGKNLV 508
IAMSG+++V
Sbjct: 120 IAMSGRDMV 128
>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
Neoptera|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 911
Score = 122 bits (295), Expect = 8e-27
Identities = 59/86 (68%), Positives = 69/86 (80%), Gaps = 2/86 (2%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS-- 684
+AQTGSGKTLAY+LP IVHI +Q P++RG+GP+ LVLAPTRELAQQIQ V DFG S
Sbjct: 272 IAQTGSGKTLAYMLPGIVHIAHQKPLQRGEGPVVLVLAPTRELAQQIQTVVRDFGTHSKP 331
Query: 685 YVRNTCVFGGAPKREQARDLERGVEI 762
+R TC+FGGA K Q RDLERGVE+
Sbjct: 332 LIRYTCIFGGALKGPQVRDLERGVEV 357
Score = 107 bits (258), Expect = 2e-22
Identities = 45/85 (52%), Positives = 61/85 (71%)
Frame = +2
Query: 254 IQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 433
++PF K+FY PHP V+ R+P EV+ +R ++TV G V +P Q FEE NFPD+V +
Sbjct: 186 LEPFEKDFYVPHPNVMARTPEEVQAFRERMQITVMGNSVPHPSQDFEEGNFPDFVMNEIN 245
Query: 434 TMGYKEPTPIQAQGWPIAMSGKNLV 508
MG+ PT IQAQGWPIA+SG++LV
Sbjct: 246 KMGFPNPTAIQAQGWPIALSGRDLV 270
>UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase DBP2
- Gibberella zeae (Fusarium graminearum)
Length = 555
Score = 121 bits (292), Expect = 2e-26
Identities = 56/86 (65%), Positives = 66/86 (76%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+A+TGSGKTL Y LP+IVHIN QP + GDGPI LVLAPTRELA QIQ+ FG +S +
Sbjct: 177 IAETGSGKTLTYCLPSIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQEEMKKFGRSSRI 236
Query: 691 RNTCVFGGAPKREQARDLERGVEISL 768
RNTCV+GG PK Q RDL RGVE+ +
Sbjct: 237 RNTCVYGGVPKGPQIRDLSRGVEVCI 262
Score = 95.1 bits (226), Expect = 2e-18
Identities = 42/99 (42%), Positives = 62/99 (62%)
Frame = +2
Query: 263 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 442
F K+FY HP V RS +VE +R H++T++G V P++ F+EA FP YV VK G
Sbjct: 94 FEKSFYKEHPDVETRSDADVEAFRRKHQMTIAGSNVPKPVETFDEAGFPRYVMDEVKAQG 153
Query: 443 YKEPTPIQAQGWPIAMSGKNLVA*LKRVPAKRWPTSCQP 559
+ PT IQ+QGWP+A+SG+++V + + + T C P
Sbjct: 154 FPAPTAIQSQGWPMALSGRDVVG-IAETGSGKTLTYCLP 191
>UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;
n=11; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
30 - Oryza sativa subsp. japonica (Rice)
Length = 666
Score = 120 bits (290), Expect = 3e-26
Identities = 54/84 (64%), Positives = 66/84 (78%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+AQTGSGKTL+Y+LP +VH+ QP + +GDGPI L+LAPTRELA QIQQ + FG S
Sbjct: 294 IAQTGSGKTLSYLLPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQQESGKFGSYSRT 353
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
R+TC++GGAPK Q RDL RGVEI
Sbjct: 354 RSTCIYGGAPKGPQIRDLRRGVEI 377
Score = 103 bits (247), Expect = 5e-21
Identities = 42/92 (45%), Positives = 61/92 (66%)
Frame = +2
Query: 233 PRLGFCFIQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPD 412
P+ F + PF KNFY P V S +V +YR ++TV G +V P++YF+EANFPD
Sbjct: 201 PKPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPD 260
Query: 413 YVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
Y Q + G+ EPTPIQ+QGWP+A+ G++++
Sbjct: 261 YCMQAIAKSGFVEPTPIQSQGWPMALKGRDMI 292
>UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3;
Aconoidasida|Rep: RNA helicase, putative - Theileria
parva
Length = 635
Score = 109 bits (262), Expect = 8e-23
Identities = 52/84 (61%), Positives = 65/84 (77%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+A+TGSGKTLA++LPAIVHIN Q +R GDGPI LVLAPTRELA+QI++ A FG +S +
Sbjct: 253 IAETGSGKTLAFLLPAIVHINAQALLRPGDGPIVLVLAPTRELAEQIKETALVFGRSSKL 312
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
+ + +GG PKR Q L RGVEI
Sbjct: 313 KTSVAYGGVPKRFQTIALRRGVEI 336
Score = 84.6 bits (200), Expect = 3e-15
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +2
Query: 263 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTV-SGVEVHNPIQYFEEANFPDYVQQGVKTM 439
F KNFY HP V + E +E R E+TV G +V P+ FE +FP Y+ ++
Sbjct: 169 FEKNFYVEHPEVKAMTQQEADEIRRAKEITVVHGRDVPKPVVKFEYTSFPRYILSSIEAA 228
Query: 440 GYKEPTPIQAQGWPIAMSGKNLV 508
G+KEPTPIQ Q WPIA+SG++++
Sbjct: 229 GFKEPTPIQVQSWPIALSGRDMI 251
>UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;
Tetrahymena thermophila SB210|Rep: P68-like protein,
putative - Tetrahymena thermophila SB210
Length = 699
Score = 109 bits (261), Expect = 1e-22
Identities = 49/84 (58%), Positives = 64/84 (76%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+AQTGSGKTL+++LPA+VHIN Q P++ G+GPIALVLAPTRELA QIQ+ FG +
Sbjct: 256 IAQTGSGKTLSFMLPALVHINAQDPVKPGEGPIALVLAPTRELANQIQEQCFKFGSKCKI 315
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
+ CV+GGAPK Q ++L G +I
Sbjct: 316 SSVCVYGGAPKIYQEKELRNGCDI 339
Score = 39.5 bits (88), Expect = 0.096
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +2
Query: 254 IQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGV--EVHNPIQYFEEANFPDYVQQG 427
++PF K FY ++ + E+ Y+ + + EV P + E FP Y+
Sbjct: 151 LKPFQKVFYQVGKSI--HTDEEIATYQREKGIIIRSKHKEVPQPFIKWNETKFPKYIMSV 208
Query: 428 VKTMGYKEPTPIQAQ 472
++ + EP PIQAQ
Sbjct: 209 IEDSKFSEPMPIQAQ 223
>UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68;
n=2; Cryptosporidium|Rep: Similar to RNA-dependent
helicase p68 - Cryptosporidium hominis
Length = 406
Score = 108 bits (259), Expect = 2e-22
Identities = 48/86 (55%), Positives = 63/86 (73%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+A+TGSGKTL ++LPA++HI QP +R GDGPI LVLAPTREL +QI++ A FG +
Sbjct: 31 IAETGSGKTLGFLLPAMIHIRAQPLLRYGDGPICLVLAPTRELVEQIREQANQFGSIFKL 90
Query: 691 RNTCVFGGAPKREQARDLERGVEISL 768
RNT ++GG PKR Q + GVEI +
Sbjct: 91 RNTAIYGGVPKRPQQASIRNGVEICI 116
Score = 35.5 bits (78), Expect = 1.6
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +2
Query: 449 EPTPIQAQGWPIAMSGKNLV 508
EPT IQ QGWP+A+SG +++
Sbjct: 10 EPTAIQVQGWPVALSGHDMI 29
>UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3;
Eukaryota|Rep: Helicase, truncated, putative -
Plasmodium falciparum (isolate 3D7)
Length = 352
Score = 106 bits (255), Expect = 6e-22
Identities = 51/83 (61%), Positives = 61/83 (73%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 693
A+TGSGKTLA+ILPA VHI QP ++ GDGPI LVLAPTRELA+QI+Q F S +R
Sbjct: 157 AETGSGKTLAFILPAFVHILAQPNLKYGDGPIVLVLAPTRELAEQIRQECIKFSTESKIR 216
Query: 694 NTCVFGGAPKREQARDLERGVEI 762
NTC +GG PK Q L++GV I
Sbjct: 217 NTCAYGGVPKSGQIYALKQGVHI 239
Score = 85.4 bits (202), Expect = 1e-15
Identities = 38/84 (45%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Frame = +2
Query: 260 PFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTV-SGVEVHNPIQYFEEANFPDYVQQGVKT 436
PF KNFY H + K S EV+E R+ H++T+ G V P+ + FPDYV + +K
Sbjct: 71 PFEKNFYKEHEDISKLSTKEVKEIRDKHKITILEGENVPKPVVSINKIGFPDYVIKSLKN 130
Query: 437 MGYKEPTPIQAQGWPIAMSGKNLV 508
PTPIQ QGWPIA+SGK+++
Sbjct: 131 NNIVAPTPIQIQGWPIALSGKDMI 154
>UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein;
n=2; Tetrahymena thermophila|Rep: DEAD/DEAH box helicase
family protein - Tetrahymena thermophila SB210
Length = 713
Score = 106 bits (255), Expect = 6e-22
Identities = 46/84 (54%), Positives = 67/84 (79%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+A+TGSGKTL+++LP+IVHIN QP +++GDGPI LVLAPTRELA QI++ + FG +S +
Sbjct: 144 IAETGSGKTLSFLLPSIVHINAQPTVKKGDGPIVLVLAPTRELAMQIERESERFGKSSKL 203
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
+ C++GGA K Q L++GV++
Sbjct: 204 KCACIYGGADKYSQRALLQQGVDV 227
Score = 48.4 bits (110), Expect = 2e-04
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +2
Query: 263 FNKNFYDPHPTVLKRSPYEVEE-YRNNHEVTVSGV-EVHNPIQYFEEANFPDYVQQGVKT 436
F K FY + R+ E+EE YR NH S +V +P + + +FP Y+ V
Sbjct: 61 FQKVFYKESQKI--RTEEEIEEFYRQNHISAKSPHGKVPDPFLSWTDTHFPQYIMNEVTH 118
Query: 437 MGYKEPTPIQAQGWPIAMSGKNLV 508
+++P+PIQ+ +P+ +SG +L+
Sbjct: 119 AKFEKPSPIQSLAFPVVLSGHDLI 142
>UniRef50_Q17BQ3 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 154
Score = 105 bits (251), Expect = 2e-21
Identities = 52/104 (50%), Positives = 73/104 (70%)
Frame = +1
Query: 424 RCKDNGLQRTDAYSSSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 603
RC G+ +++ +RLA Y+ + +TGSGKTL+Y+LPA++ I+ Q +RRGDG
Sbjct: 17 RCL-RGVNHSNSDPVARLASRYMVG----ITKTGSGKTLSYLLPALMPIDEQSRLRRGDG 71
Query: 604 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQA 735
PIAL+LAPTRELAQQI+QV DFG ++N C+FGG+ KR +
Sbjct: 72 PIALILAPTRELAQQIKQVTDDFGRAIKIKNICLFGGSAKRRSS 115
>UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP2 -
Encephalitozoon cuniculi
Length = 495
Score = 103 bits (248), Expect = 4e-21
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+AQTGSGKTL++ILPA+VH +Q P+RRGDGPI LVLAPTREL QI++V +F +
Sbjct: 130 IAQTGSGKTLSFILPALVHAKDQQPLRRGDGPIVLVLAPTRELVMQIKKVVDEFCGMFNL 189
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
R+T V+GGA + Q R L G E+
Sbjct: 190 RSTAVYGGASSQPQIRALHEGAEV 213
Score = 83.0 bits (196), Expect = 8e-15
Identities = 36/82 (43%), Positives = 51/82 (62%)
Frame = +2
Query: 263 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 442
F KNFY ++ + +P EV +R +E+ V G V +PIQ FEEA F V + G
Sbjct: 47 FQKNFYQEAESISRMTPSEVSSFRKTNEMIVKGTNVPHPIQKFEEAGFSSEVVSSLVEKG 106
Query: 443 YKEPTPIQAQGWPIAMSGKNLV 508
+ EPT IQ QGWP+A+SG+++V
Sbjct: 107 FSEPTAIQGQGWPMALSGRDMV 128
>UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 598
Score = 101 bits (242), Expect = 2e-20
Identities = 47/78 (60%), Positives = 59/78 (75%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+A+TGSGKT A+++PA+VHI Q P+ RGDGPI LVL+PTRELAQQI +VA F +
Sbjct: 168 IAKTGSGKTAAFLIPAMVHIGLQEPMYRGDGPIVLVLSPTRELAQQIAEVAKGFCDNLMI 227
Query: 691 RNTCVFGGAPKREQARDL 744
R TC+FGGA + QA DL
Sbjct: 228 RQTCLFGGAGRGPQANDL 245
Score = 43.6 bits (98), Expect = 0.006
Identities = 18/64 (28%), Positives = 37/64 (57%)
Frame = +2
Query: 317 EVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 496
E ++ ++ + + +V +P FEE N PD + + + +++PTPIQ+ P+A+ G
Sbjct: 103 EQVQFLKSNAIKLLASDVPSPALTFEELNLPDTITKTITDNKWEKPTPIQSVSIPVALKG 162
Query: 497 KNLV 508
+L+
Sbjct: 163 HDLI 166
>UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=6; Trypanosomatidae|Rep: ATP-dependent
DEAD/H RNA helicase, putative - Leishmania major
Length = 502
Score = 96.3 bits (229), Expect = 8e-19
Identities = 46/87 (52%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQ-QVAADFGHTSY 687
VA+TGSGKT+A+++PA +HI QPP++ GDGPIALVLAPTRELA QI+ +
Sbjct: 188 VAKTGSGKTMAFMIPAALHIMAQPPLQPGDGPIALVLAPTRELAVQIETETRKALTRVPS 247
Query: 688 VRNTCVFGGAPKREQARDLERGVEISL 768
+ TCV+GG PK Q R L GV + +
Sbjct: 248 IMTTCVYGGTPKGPQQRALRAGVHVCI 274
Score = 54.8 bits (126), Expect = 2e-06
Identities = 24/79 (30%), Positives = 42/79 (53%)
Frame = +2
Query: 272 NFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKE 451
NFY P RS E+ + + +T+ G V P+ F + PD + Q G+++
Sbjct: 111 NFYKPQKP---RSEEEIATWLRENSITIYGDRVPQPMLEFSDLVAPDAIHQAFMDAGFQK 167
Query: 452 PTPIQAQGWPIAMSGKNLV 508
PTPIQ+ WP+ ++ +++V
Sbjct: 168 PTPIQSVSWPVLLNSRDIV 186
>UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 40 - Oryza sativa subsp. japonica (Rice)
Length = 792
Score = 96.3 bits (229), Expect = 8e-19
Identities = 46/84 (54%), Positives = 59/84 (70%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+A+TGSGKTL Y+LP +HI R GP LVLAPTRELA QI + A FG +S +
Sbjct: 193 IAKTGSGKTLGYLLPGFMHIKRLQNNPRS-GPTVLVLAPTRELATQILEEAVKFGRSSRI 251
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
+TC++GGAPK Q RDL+RGV++
Sbjct: 252 SSTCLYGGAPKGPQLRDLDRGVDV 275
Score = 66.5 bits (155), Expect = 7e-10
Identities = 29/63 (46%), Positives = 40/63 (63%)
Frame = +2
Query: 323 EEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 502
E YR+ HE+TV G V PI FE FP + + ++ G+ PTPIQAQ WPIA+ ++
Sbjct: 130 EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQD 189
Query: 503 LVA 511
+VA
Sbjct: 190 VVA 192
>UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=15; Pezizomycotina|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Gibberella zeae (Fusarium graminearum)
Length = 1227
Score = 95.1 bits (226), Expect = 2e-18
Identities = 44/84 (52%), Positives = 58/84 (69%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
VA+TGSGKT+A++LP HI +QPP++ DGPI L++ PTRELA QI + F +
Sbjct: 640 VAKTGSGKTVAFLLPMFRHIKDQPPLKDTDGPIGLIMTPTRELAVQIHKDCKPFLKMMGL 699
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
R C +GGAP REQ +L+RG EI
Sbjct: 700 RAVCAYGGAPIREQIAELKRGAEI 723
Score = 50.8 bits (116), Expect = 4e-05
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 IQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGV 430
I+P KNF+ + + EV + R + + V+G +V P+Q + + V
Sbjct: 553 IEPIRKNFWHEPAELSLLTEAEVADLRLELDGIKVNGKDVPKPVQKWAQCGLTRQTLDVV 612
Query: 431 KTMGYKEPTPIQAQGWPIAMSGKNLV 508
+GY++PTPIQ Q P MSG++++
Sbjct: 613 DNLGYEKPTPIQMQALPALMSGRDVI 638
>UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2;
Magnoliophyta|Rep: Isoform 2 of Q5VQL1 - Oryza sativa
subsp. japonica (Rice)
Length = 759
Score = 93.5 bits (222), Expect = 6e-18
Identities = 45/89 (50%), Positives = 59/89 (66%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
++ VA+TGSGKTL Y++P + + R DGP LVL+PTRELA QIQ A FG
Sbjct: 269 RDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSR-DGPTVLVLSPTRELATQIQDEAKKFG 327
Query: 676 HTSYVRNTCVFGGAPKREQARDLERGVEI 762
+S + + C++GGAPK Q RDLERG +I
Sbjct: 328 RSSRISSVCLYGGAPKGPQLRDLERGADI 356
Score = 39.9 bits (89), Expect = 0.073
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 404 FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
F + V+ G+ PTPIQAQ WPIA+ +++VA
Sbjct: 238 FKSTIYVKVQQAGFSAPTPIQAQSWPIALRNRDIVA 273
>UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 518
Score = 93.5 bits (222), Expect = 6e-18
Identities = 44/84 (52%), Positives = 57/84 (67%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+A+TGSGKT A++ PA+VHI +QP ++ GDGPI L+ APTREL QQI A FG +
Sbjct: 149 IAKTGSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNI 208
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
VFGG K EQ++ L+ G EI
Sbjct: 209 HVVAVFGGGNKYEQSKALQEGAEI 232
Score = 73.3 bits (172), Expect = 6e-12
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Frame = +2
Query: 257 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 436
+PFNKNFY+ HP + K+S E+++ R + VSG P F F + + ++
Sbjct: 64 KPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDEQMMASIRK 123
Query: 437 MGYKEPTPIQAQGWPIAMSGKNLVA*LK----RVPAKRWP 544
+ Y +PT IQ Q PIA+SG++++ K + A WP
Sbjct: 124 LEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWP 163
>UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase prp11; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase prp11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 1014
Score = 93.5 bits (222), Expect = 6e-18
Identities = 42/84 (50%), Positives = 59/84 (70%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
VA+TGSGKT+A++LP HI +Q P++ G+GPIA+++ PTRELA QI + F +
Sbjct: 461 VAKTGSGKTIAFLLPMFRHIKDQRPLKTGEGPIAIIMTPTRELAVQIFRECKPFLKLLNI 520
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
R C +GGAP ++Q DL+RG EI
Sbjct: 521 RACCAYGGAPIKDQIADLKRGAEI 544
Score = 48.8 bits (111), Expect = 2e-04
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 433
+ F K+FY + SP EV+E R + + + + G++ P+ + + +
Sbjct: 375 EDFKKDFYVEPEELKNLSPAEVDELRASLDGIKIRGIDCPKPVTSWSQCGLSAQTISVIN 434
Query: 434 TMGYKEPTPIQAQGWPIAMSGKNLV 508
++GY++PT IQAQ P SG++++
Sbjct: 435 SLGYEKPTSIQAQAIPAITSGRDVI 459
>UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=4; Saccharomycetales|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 913
Score = 93.1 bits (221), Expect = 7e-18
Identities = 41/84 (48%), Positives = 58/84 (69%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
VA+TGSGKTL+++LP + HI +QPP+RRGDGPI L++ PTRELA QI + F +
Sbjct: 360 VAKTGSGKTLSFVLPLLRHIQDQPPLRRGDGPIGLIMTPTRELALQIHKELNHFTKKLNI 419
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
+ C FGG+ Q +L++G +I
Sbjct: 420 SSCCCFGGSSIESQIAELKKGAQI 443
Score = 46.0 bits (104), Expect = 0.001
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +2
Query: 260 PFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK- 433
PF K+FY +LK EV R + + V GV PI + + P + ++
Sbjct: 274 PFRKDFYTEPTEILKLPEEEVANLRLKLDGIRVRGVNCTRPIIRWSQLGLPSTIMSIIEG 333
Query: 434 TMGYKEPTPIQAQGWPIAMSGKNLV 508
+ Y P+ IQAQ P MSG++++
Sbjct: 334 RLNYSSPSSIQAQAIPAIMSGRDII 358
>UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 440
Score = 92.3 bits (219), Expect = 1e-17
Identities = 46/81 (56%), Positives = 57/81 (70%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+A TGSGKTLA+ +PA+ I++QPP + G PI LVLAPTRELAQQ +V D G S V
Sbjct: 70 IAATGSGKTLAFGMPALTQIHSQPPCKPGQ-PICLVLAPTRELAQQTAKVFDDAGEASGV 128
Query: 691 RNTCVFGGAPKREQARDLERG 753
R CV+GGAPK EQ ++ G
Sbjct: 129 RCVCVYGGAPKYEQKAQMKAG 149
Score = 41.9 bits (94), Expect = 0.018
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +2
Query: 308 SPYEVEEYRNNHEVT-VSGVEVH-NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWP 481
S EV+ R+ VT V G+ P+ F +A F + + T +K P+PIQAQ WP
Sbjct: 2 SASEVQAARDALAVTQVDGLSTDLAPVSSFADAGFSKELLR--VTAQFKTPSPIQAQSWP 59
Query: 482 IAMSGKNLV 508
I MSG ++V
Sbjct: 60 IIMSGHDMV 68
>UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;
n=2; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 42 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1166
Score = 91.9 bits (218), Expect = 2e-17
Identities = 43/84 (51%), Positives = 56/84 (66%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
VA+TGSGKTL ++LP + HI +QPP+ GDGPI LV+APTREL QQI F +
Sbjct: 572 VAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGI 631
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
R V+GG+ +Q +L+RG EI
Sbjct: 632 RCVPVYGGSGVAQQISELKRGTEI 655
Score = 63.7 bits (148), Expect = 5e-09
Identities = 28/84 (33%), Positives = 46/84 (54%)
Frame = +2
Query: 257 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 436
+PF KNFY + + + EV YR E+ V G +V PI+++ + + +K
Sbjct: 487 EPFRKNFYIEVKDISRMTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKK 546
Query: 437 MGYKEPTPIQAQGWPIAMSGKNLV 508
+ Y++P PIQ Q PI MSG++ +
Sbjct: 547 LNYEKPMPIQTQALPIIMSGRDCI 570
>UniRef50_Q4TEE5 Cluster: Chromosome undetermined SCAF5464, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF5464,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 307
Score = 91.1 bits (216), Expect = 3e-17
Identities = 40/82 (48%), Positives = 54/82 (65%)
Frame = +2
Query: 263 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 442
F KNFY H V + S +EVEEYR E+T+ G PI F +A+FP YV +
Sbjct: 46 FEKNFYTEHLEVERTSQFEVEEYRRKKEITIRGTGCPKPIIKFHQAHFPQYVMDVLMQQN 105
Query: 443 YKEPTPIQAQGWPIAMSGKNLV 508
+KEPTPIQAQG+P+A+SG+++V
Sbjct: 106 FKEPTPIQAQGFPLALSGRDMV 127
Score = 34.3 bits (75), Expect = 3.6
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +3
Query: 552 ASHCAHKQPTAYSER*WSDCFGLGAYQRVSTTNSASCCRFWTHILCS*HVCVWWCS*KRA 731
A +CAH+ W+ FG G ++ + SA R + H+ V C+ +
Sbjct: 173 ACYCAHQPSALLGAWRWTHMFGFGPHEGIGPAGSAGSIRLRKVLTHQKHLRVRRCAEGTS 232
Query: 732 SPGLGE 749
+PG GE
Sbjct: 233 NPGSGE 238
>UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 523
Score = 91.1 bits (216), Expect = 3e-17
Identities = 38/82 (46%), Positives = 54/82 (65%)
Frame = +2
Query: 263 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 442
F KNFY P+V + EVE YR E+TV G +V P++ F + FP+YV Q + G
Sbjct: 53 FEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKAG 112
Query: 443 YKEPTPIQAQGWPIAMSGKNLV 508
+ EPTPIQ+QGWP+A+ G++L+
Sbjct: 113 FVEPTPIQSQGWPMALRGRDLI 134
Score = 87.8 bits (208), Expect = 3e-16
Identities = 41/55 (74%), Positives = 46/55 (83%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
+A+TGSGKTLAY+LPAIVH+N QP + GDGPI LVLAPTRELA QIQQ A FG
Sbjct: 136 IAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEATKFG 190
>UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 970
Score = 91.1 bits (216), Expect = 3e-17
Identities = 43/84 (51%), Positives = 56/84 (66%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+A+TGSGKTLA++LP HI +QP + GDGPIA++LAPTRELA Q + A F +
Sbjct: 347 IAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGL 406
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
+ C +GG EQ DL+RG EI
Sbjct: 407 KVACTYGGVGISEQIADLKRGAEI 430
Score = 51.2 bits (117), Expect = 3e-05
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +2
Query: 251 FIQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQG 427
+ + F KNFY + + + EV+ YR + +TV G++ PI+ + + +
Sbjct: 259 YYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNV 318
Query: 428 VKTMGYKEPTPIQAQGWPIAMSGKNLV 508
+K Y +PT IQAQ P MSG++++
Sbjct: 319 LKKFEYSKPTSIQAQAIPSIMSGRDVI 345
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 90.2 bits (214), Expect = 5e-17
Identities = 45/86 (52%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHT-SYV 690
A+TGSGKT A+ +P + H QPPIRRGDGP+ALVLAPTRELAQQI++ F + +
Sbjct: 162 AETGSGKTAAFTIPMLQHCLVQPPIRRGDGPLALVLAPTRELAQQIEKEVQAFSRSLESL 221
Query: 691 RNTCVFGGAPKREQARDLERGVEISL 768
+N V GG +Q +L GVEI++
Sbjct: 222 KNCIVVGGTNIEKQRSELRAGVEIAV 247
Score = 44.0 bits (99), Expect = 0.004
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Frame = +2
Query: 278 YDPHPTVLKRSPYEVEEY-RNNHEVTVSG--VEVHNPIQYFEEANFPDYVQQGVKTMGYK 448
+ P V + +P ++EE R N +VTVS PI+ F + + + + Y
Sbjct: 80 WQPSERVSRMNPDQIEEVVRLNLDVTVSSDSTAAPGPIESFNDMCLHPSIMKDIAYHEYT 139
Query: 449 EPTPIQAQGWPIAMSGKNLV 508
P+ IQAQ PIA+SG++L+
Sbjct: 140 RPSSIQAQAMPIALSGRDLL 159
>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 40; n=2; core eudicotyledons|Rep: Probable
DEAD-box ATP-dependent RNA helicase 40 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1088
Score = 90.2 bits (214), Expect = 5e-17
Identities = 43/89 (48%), Positives = 61/89 (68%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
++ +A+TGSGKTL Y++PA + + + R +GP L+LAPTRELA QIQ A FG
Sbjct: 473 RDIVAIAKTGSGKTLGYLIPAFILLRHCRNDSR-NGPTVLILAPTRELATQIQDEALRFG 531
Query: 676 HTSYVRNTCVFGGAPKREQARDLERGVEI 762
+S + TC++GGAPK Q ++LERG +I
Sbjct: 532 RSSRISCTCLYGGAPKGPQLKELERGADI 560
Score = 66.1 bits (154), Expect = 1e-09
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Frame = +2
Query: 266 NKNFYDPH----PTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 433
NK+ PH P V SP E+ YR HEVT +G + P FE + P + + +
Sbjct: 394 NKSLVRPHFVTSPDVPHLSPVEI--YRKQHEVTTTGENIPAPYITFESSGLPPEILRELL 451
Query: 434 TMGYKEPTPIQAQGWPIAMSGKNLVA 511
+ G+ PTPIQAQ WPIA+ +++VA
Sbjct: 452 SAGFPSPTPIQAQTWPIALQSRDIVA 477
>UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr3 scaffold_8, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 971
Score = 89.4 bits (212), Expect = 9e-17
Identities = 40/84 (47%), Positives = 56/84 (66%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+A+TGSGKTLA++LP + HI +QPP+ GDGPI L++APTREL QQI F +
Sbjct: 527 IAKTGSGKTLAFVLPMLRHIKDQPPVMPGDGPIGLIMAPTRELVQQIHSDIKKFAKVVGI 586
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
V+GG+ +Q +L+RG E+
Sbjct: 587 SCVPVYGGSGVAQQISELKRGAEV 610
Score = 62.9 bits (146), Expect = 9e-09
Identities = 27/84 (32%), Positives = 45/84 (53%)
Frame = +2
Query: 257 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 436
+PF KNFY + +P E+ YR E+ + G +V P++ + + + +K
Sbjct: 442 KPFRKNFYIEVKESARMTPEEIAAYRKQLELKIHGKDVPKPVKTWHQTGLTTKILDTIKK 501
Query: 437 MGYKEPTPIQAQGWPIAMSGKNLV 508
+ Y+ P PIQAQ PI MSG++ +
Sbjct: 502 LNYERPMPIQAQALPIIMSGRDCI 525
>UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n=1;
Plasmodium vivax|Rep: ATP-dependent RNA helicase,
putative - Plasmodium vivax
Length = 1341
Score = 89.4 bits (212), Expect = 9e-17
Identities = 40/89 (44%), Positives = 60/89 (67%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
++ +A+TGSGKTL+Y+ P I H+ +QPP+R DGPIA++L PTREL++Q++ A +
Sbjct: 707 RDVIAIAETGSGKTLSYLFPLIRHVLHQPPLRNNDGPIAIILTPTRELSKQVKSEARPYC 766
Query: 676 HTSYVRNTCVFGGAPKREQARDLERGVEI 762
+R V+GG+ Q L+RGVEI
Sbjct: 767 QAVNLRILAVYGGSNIGTQLNTLKRGVEI 795
Score = 42.7 bits (96), Expect = 0.010
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +2
Query: 260 PFNKNFYDPHPTVLKRSPYEVEEYR-NNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 436
P KN Y + +V+ +R NN + V G P+QYF + P + ++
Sbjct: 627 PIKKNIYVQVSEITNMKESDVDLFRKNNGNIIVRGKNCPRPVQYFYQCGLPSKILPILER 686
Query: 437 MGYKEPTPIQAQGWPIAMSGKNLVA 511
+K+ IQ Q P M G++++A
Sbjct: 687 KQFKKMFGIQMQTIPALMCGRDVIA 711
>UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1151
Score = 89.0 bits (211), Expect = 1e-16
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
VA+TGSGKT+A++LP HI +Q P++ DGPI L++ PTRELA QI + F +
Sbjct: 597 VAKTGSGKTIAFLLPMFRHIRDQRPLKGSDGPIGLIMTPTRELATQIHKECKPFLKAMGL 656
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
R C +GGA ++Q DL+RG EI
Sbjct: 657 RAVCAYGGAIIKDQIADLKRGAEI 680
Score = 48.8 bits (111), Expect = 2e-04
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 IQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGV 430
+ PF KNFY + + + E+ + R + + V+G +V P+Q + + +
Sbjct: 510 LPPFRKNFYTEPTELAEMTEAEIADLRLELDGIKVAGKDVPKPVQKWSQCGLDVKSLDVI 569
Query: 431 KTMGYKEPTPIQAQGWPIAMSGKNLV 508
+GY+ PT IQ Q P MSG++++
Sbjct: 570 TKLGYERPTSIQMQAIPAIMSGRDVI 595
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 89.0 bits (211), Expect = 1e-16
Identities = 42/84 (50%), Positives = 58/84 (69%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+A+TGSGKT A++LP IVHI +QP ++R +GPI ++ APTRELA QI A F +
Sbjct: 271 IAKTGSGKTAAFVLPMIVHIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGL 330
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
R + V+GG K EQ ++L+ G EI
Sbjct: 331 RVSAVYGGMSKHEQFKELKAGCEI 354
Score = 72.1 bits (169), Expect = 1e-11
Identities = 28/84 (33%), Positives = 49/84 (58%)
Frame = +2
Query: 257 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 436
+P NK+FY+ ++ + E +YR + VSG +VH P++ FE+ F + +K
Sbjct: 186 EPINKDFYEELESISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSAIKK 245
Query: 437 MGYKEPTPIQAQGWPIAMSGKNLV 508
Y++PT IQ Q PI +SG++++
Sbjct: 246 QAYEKPTAIQCQALPIVLSGRDVI 269
>UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1;
Ostreococcus tauri|Rep: DEAD/DEAH box RNA helicase -
Ostreococcus tauri
Length = 507
Score = 88.6 bits (210), Expect = 2e-16
Identities = 45/85 (52%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+A TGSGKTLA++LPA I+ Q P+R+ +GP+ALVLAPTRELA QI A F
Sbjct: 146 LATTGSGKTLAFLLPAYAQISRQRPLRKKEGPMALVLAPTRELATQIANEANAFNRAGVP 205
Query: 691 RNTC-VFGGAPKREQARDLERGVEI 762
C +FGGA K EQ + L G EI
Sbjct: 206 ARCCAIFGGASKHEQLKRLRAGAEI 230
Score = 35.5 bits (78), Expect = 1.6
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 320 VEEYRNNHEVTVSGVEVHNPIQYFEEANFPD-YVQQGVKTMGYKEPTPIQAQGWPIAMSG 496
VE R +V V G E P++ F + D + + +K +GY+ PT IQAQ P+ G
Sbjct: 82 VEARREALDVRVDG-ETRAPVERFGQGGALDVHAIRALKRLGYETPTGIQAQCIPVICGG 140
Query: 497 KN 502
++
Sbjct: 141 RD 142
>UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium
tetraurelia|Rep: RNA helicase, putative - Paramecium
tetraurelia
Length = 1157
Score = 88.6 bits (210), Expect = 2e-16
Identities = 43/89 (48%), Positives = 58/89 (65%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
++F +A+TGSGKTLAY+LP + H+ +QP ++ GDGPIA+++APTRELA QI F
Sbjct: 542 RDFIGIAETGSGKTLAYLLPLLRHVLDQPALKDGDGPIAIIMAPTRELAHQIYVNCRWFT 601
Query: 676 HTSYVRNTCVFGGAPKREQARDLERGVEI 762
+ C GGA Q DL+RG EI
Sbjct: 602 SILNLNVVCCVGGAGIAGQLSDLKRGTEI 630
Score = 47.6 bits (108), Expect = 4e-04
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 QPFNKNFYDPHPTVLKRSPYEVEEYRNN-HEVTVSGVEVHNPIQYFEEANFPDYVQQG-V 430
QPF K+FY +++ +P E ++ R ++ V G +V PIQ + + D V +
Sbjct: 460 QPFRKDFYREVSELVQMTPEEAKKLRQQLGDIKVRGKDVPKPIQNWYQCGLNDRVLNVLI 519
Query: 431 KTMGYKEPTPIQAQGWPIAMSGKNLV 508
+ + P PIQAQ P MSG++ +
Sbjct: 520 EKKKFINPFPIQAQAVPCIMSGRDFI 545
>UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;
n=15; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
45 - Arabidopsis thaliana (Mouse-ear cress)
Length = 989
Score = 88.6 bits (210), Expect = 2e-16
Identities = 42/84 (50%), Positives = 55/84 (65%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
VA+TGSGKTL ++LP + HI +QPP+ GDGPI LV+APTREL QQI F +
Sbjct: 439 VAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIYSDIRKFSKALGI 498
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
V+GG+ +Q +L+RG EI
Sbjct: 499 ICVPVYGGSGVAQQISELKRGTEI 522
Score = 64.1 bits (149), Expect = 4e-09
Identities = 29/84 (34%), Positives = 46/84 (54%)
Frame = +2
Query: 257 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 436
+PF KNFY + + + V YR E+ V G +V PIQ++ + + +K
Sbjct: 354 EPFRKNFYIEVKDISRMTQDAVNAYRKELELKVHGKDVPRPIQFWHQTGLTSKILDTLKK 413
Query: 437 MGYKEPTPIQAQGWPIAMSGKNLV 508
+ Y++P PIQAQ PI MSG++ +
Sbjct: 414 LNYEKPMPIQAQALPIIMSGRDCI 437
>UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n=6;
Trypanosomatidae|Rep: Putative DEAD-box RNA helicase
HEL64 - Trypanosoma brucei brucei
Length = 568
Score = 88.2 bits (209), Expect = 2e-16
Identities = 46/84 (54%), Positives = 57/84 (67%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
VA+TGSGKTL +++PA+ HI Q P+R GDGP+ +VLAPTRELAQQI++ V
Sbjct: 145 VAKTGSGKTLGFMVPALAHIAVQEPLRSGDGPMVVVLAPTRELAQQIEEETKKV-IPGDV 203
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
CV+GGAPK Q L RGV I
Sbjct: 204 YCGCVYGGAPKGPQLGLLRRGVHI 227
Score = 51.2 bits (117), Expect = 3e-05
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +2
Query: 290 PTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEE--ANFPDYVQQGVKTMGYKEPTPI 463
P + S E ++R H +T+ G + P+ F+ P Y+ + + + PTP+
Sbjct: 69 PEAGQLSEEEATKWREEHVITIFGDDCPPPMSSFDHLCGIVPPYLLKKLTAQNFTAPTPV 128
Query: 464 QAQGWPIAMSGKNLV 508
QAQ WP+ +SG++LV
Sbjct: 129 QAQSWPVLLSGRDLV 143
>UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 994
Score = 87.8 bits (208), Expect = 3e-16
Identities = 42/89 (47%), Positives = 59/89 (66%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
++ +A+TGSGKT+AY+LPAI H+ QP +R +G I L++APTRELA QI ++
Sbjct: 426 RDVLAIAETGSGKTMAYLLPAIRHVLYQPKLRENEGMIVLIIAPTRELASQIGVESSKLC 485
Query: 676 HTSYVRNTCVFGGAPKREQARDLERGVEI 762
+R V+GG+P EQ L+RGVEI
Sbjct: 486 KLVGIRTKAVYGGSPIGEQLNALKRGVEI 514
Score = 55.6 bits (128), Expect = 1e-06
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +2
Query: 257 QPFNKNFYDPHPTVLKRSPYEVEEYRN-NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 433
QPF KNFY + +EVE +R N + V G PI F + PD + ++
Sbjct: 345 QPFKKNFYVQISAITAMKEHEVEAFRKANGNIRVRGKYCPRPIYNFSQCGLPDPILSLLQ 404
Query: 434 TMGYKEPTPIQAQGWPIAMSGKNLVA 511
Y++P PIQ Q P M G++++A
Sbjct: 405 RRNYEKPFPIQMQCIPALMCGRDVLA 430
>UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1;
Ostreococcus tauri|Rep: DEAD-box protein abstrakt -
Ostreococcus tauri
Length = 1030
Score = 87.4 bits (207), Expect = 4e-16
Identities = 41/84 (48%), Positives = 55/84 (65%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+A+TGSGKTLAYILP + HIN Q P++ GDGPI +++ PTREL QI + A +G
Sbjct: 373 IAKTGSGKTLAYILPMLRHINAQEPLKNGDGPIGMIMGPTRELVTQIGKEAKRYGKALGF 432
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
V+GG+ Q +L+RG EI
Sbjct: 433 NAVSVYGGSGIAAQIGELKRGAEI 456
Score = 44.0 bits (99), Expect = 0.004
Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 433
+P K+FY + + + R + + G +V PI+ + A + + ++
Sbjct: 287 EPVKKDFYIESKEISSMTKAQTRALRAELDGIKCRGKKVPKPIKTWAHAGLSGRIHELIR 346
Query: 434 TMGYKEPTPIQAQGWPIAMSGKNLV 508
G+++P PIQAQ P+ MSG++ +
Sbjct: 347 RCGFEKPMPIQAQALPVIMSGRDCI 371
>UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-PA
- Drosophila melanogaster (Fruit fly)
Length = 1224
Score = 87.4 bits (207), Expect = 4e-16
Identities = 42/84 (50%), Positives = 56/84 (66%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+A+TGSGKTLA+ILP HI +QP + GDG IA+++APTREL QI + F + +
Sbjct: 553 IAKTGSGKTLAFILPMFRHILDQPSMEDGDGAIAIIMAPTRELCMQIGKDIRKFSKSLGL 612
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
R CV+GG EQ +L+RG EI
Sbjct: 613 RPVCVYGGTGISEQIAELKRGAEI 636
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +2
Query: 260 PFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVKT 436
PF KNFY P + + + +VE+YR++ E + V G PI+ + + + ++
Sbjct: 468 PFRKNFYVEVPELTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRR 527
Query: 437 MGYKEPTPIQAQGWPIAMSGKNLV 508
+G+++PTPIQ Q P MSG++L+
Sbjct: 528 LGFEKPTPIQCQAIPAIMSGRDLI 551
>UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;
Coelomata|Rep: ATP-dependent RNA helicase DDX42 - Homo
sapiens (Human)
Length = 938
Score = 87.4 bits (207), Expect = 4e-16
Identities = 40/84 (47%), Positives = 55/84 (65%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+A+TGSGKT A+I P ++HI +Q + GDGPIA+++ PTREL QQI FG +
Sbjct: 296 IAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNL 355
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
R+ V+GG EQA+ L+ G EI
Sbjct: 356 RSVAVYGGGSMWEQAKALQEGAEI 379
Score = 64.9 bits (151), Expect = 2e-09
Identities = 27/83 (32%), Positives = 46/83 (55%)
Frame = +2
Query: 260 PFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTM 439
PF KNFY+ H + +P ++ + R+ + VSG P F F + + ++
Sbjct: 212 PFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKS 271
Query: 440 GYKEPTPIQAQGWPIAMSGKNLV 508
Y +PTPIQ QG P+A+SG++++
Sbjct: 272 EYTQPTPIQCQGVPVALSGRDMI 294
>UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 1357
Score = 87.0 bits (206), Expect = 5e-16
Identities = 44/89 (49%), Positives = 55/89 (61%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
K +A+TGSGKTLAY+LP I H++ Q P++ GDGPI L+L PTRELA QI A F
Sbjct: 745 KSKDSIAETGSGKTLAYLLPMIRHVSAQRPLQEGDGPIGLILVPTRELATQIYLEAKPFL 804
Query: 676 HTSYVRNTCVFGGAPKREQARDLERGVEI 762
VFGG + Q +L+RG EI
Sbjct: 805 KAYKYEIVAVFGGTGIKGQLSELKRGCEI 833
Score = 53.6 bits (123), Expect = 6e-06
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Frame = +2
Query: 254 IQPFNKNFYDPHPTVLKRSPYEVEEYRNN-HEVTVSGVEVHNPIQYFEEANFPDYVQQG- 427
++ F KNFY + + + EV+ YR N E+ V G EV PI+ + ++ D + +
Sbjct: 651 LEHFQKNFYIESKEISQMTEDEVKIYRENLGEIQVKGQEVPRPIKSWLQSGLSDRILEVL 710
Query: 428 VKTMGYKEPTPIQAQGWPIAMSGKNLV 508
++ Y +P PIQ Q P+ MSG++++
Sbjct: 711 IEKKKYDKPFPIQCQSLPVIMSGRDMI 737
>UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 811
Score = 87.0 bits (206), Expect = 5e-16
Identities = 40/85 (47%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+A+TGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA Q+ Q A F +
Sbjct: 308 IAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNI 367
Query: 691 RNTCVFGGAPKREQARDLE-RGVEI 762
C +GG K EQ+ +L+ G E+
Sbjct: 368 NPICAYGGGSKWEQSNELQNEGAEM 392
Score = 60.9 bits (141), Expect = 4e-08
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Frame = +2
Query: 257 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 436
Q FNKNFY+ H + + +V +N + V G++ P+ F +F + + ++
Sbjct: 223 QKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRK 282
Query: 437 MGYKEPTPIQAQGWPIAMSGKNLVA*LK----RVPAKRWP 544
Y++PTPIQA P A+SG++++ K + A WP
Sbjct: 283 SEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWP 322
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 87.0 bits (206), Expect = 5e-16
Identities = 42/89 (47%), Positives = 59/89 (66%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
++ +A+TGSGKTL Y++P +H+ R GP LVL+PTRELA QIQ A FG
Sbjct: 199 RDIVAIAKTGSGKTLGYLIPGFMHLQRIHNDSRM-GPTILVLSPTRELATQIQVEALKFG 257
Query: 676 HTSYVRNTCVFGGAPKREQARDLERGVEI 762
+S + C++GGAPK Q +++ERGV+I
Sbjct: 258 KSSKISCACLYGGAPKGPQLKEIERGVDI 286
Score = 64.5 bits (150), Expect = 3e-09
Identities = 28/63 (44%), Positives = 40/63 (63%)
Frame = +2
Query: 323 EEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 502
E Y HE+TVSG +V P+ FE P+ + + V + G+ P+PIQAQ WPIAM ++
Sbjct: 141 EAYCRKHEITVSGGQVPPPLMSFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRD 200
Query: 503 LVA 511
+VA
Sbjct: 201 IVA 203
>UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 723
Score = 85.8 bits (203), Expect = 1e-15
Identities = 42/84 (50%), Positives = 53/84 (63%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
VA+TGSGKTLAYILP + HIN Q P+ GDGPI +++ PTREL QI + +G
Sbjct: 160 VAKTGSGKTLAYILPMLRHINAQEPLASGDGPIGMIMGPTRELVTQIGKDCKRYGKAMGF 219
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
V+GG+ Q DL+RG EI
Sbjct: 220 SAVSVYGGSGIAAQIGDLKRGAEI 243
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 433
+P KNFY + + EV++ R + + G +V PI+ + +A + V + ++
Sbjct: 74 EPVKKNFYIEAKEIASMTKAEVKQLRVELDGIKCRGKKVPKPIKTWAQAGLNNRVHELIR 133
Query: 434 TMGYKEPTPIQAQGWPIAMSGKNLV 508
G+++P PIQAQ P+ MSG++ +
Sbjct: 134 RSGFEKPMPIQAQALPVIMSGRDCI 158
>UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 478
Score = 85.4 bits (202), Expect = 1e-15
Identities = 45/86 (52%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH--TS 684
+A+TGSGKTLA++LPA I+ Q P+ + +GPIALVLAPTRELA QI A F S
Sbjct: 98 MAKTGSGKTLAFLLPAYAQISRQRPLTKREGPIALVLAPTRELASQIANEAHKFTKFGVS 157
Query: 685 YVRNTCVFGGAPKREQARDLERGVEI 762
R +FGG KR+Q + L G EI
Sbjct: 158 GARCCAIFGGVSKRDQFKKLRAGAEI 183
>UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helicase
DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
protein HAGE) (Helical antigen).; n=1; Takifugu
rubripes|Rep: Probable ATP-dependent RNA helicase DDX43
(EC 3.6.1.-) (DEAD box protein 43) (DEAD box protein
HAGE) (Helical antigen). - Takifugu rubripes
Length = 510
Score = 85.0 bits (201), Expect = 2e-15
Identities = 40/85 (47%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQP-PIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSY 687
+AQTG+GKTLAY+LP +H+N QP P +GP LVL PTRELA Q+ + + Y
Sbjct: 118 IAQTGTGKTLAYLLPGFIHMNGQPVPKCERNGPGMLVLTPTRELALQVDAECKKYSYKDY 177
Query: 688 VRNTCVFGGAPKREQARDLERGVEI 762
++ CV+GG ++ Q +ERGV+I
Sbjct: 178 -KSVCVYGGGDRKAQIHKVERGVDI 201
Score = 48.8 bits (111), Expect = 2e-04
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Frame = +2
Query: 254 IQPFNKNFYDPHPTVLKRSPYEVEEYRN---NHEVTVSGVE-------VHNPIQYFEEAN 403
+ P K FY ++ P EV ++R N+ + V ++ + P + F EA
Sbjct: 21 LPPIKKQFYIEAESLSALMPEEVNQWRQAKENNNIFVDDLKKEGEKRPIPKPCRTFLEA- 79
Query: 404 FPDY--VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
F Y + VK G+ PTPIQ+Q WP+ +SG +L+A
Sbjct: 80 FQHYTEIMDNVKHAGFVNPTPIQSQAWPVLLSGDDLIA 117
>UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4;
Eukaryota|Rep: RNA helicase, putative - Theileria
annulata
Length = 976
Score = 85.0 bits (201), Expect = 2e-15
Identities = 41/84 (48%), Positives = 55/84 (65%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+A+TGSGKTLA++LPAI H +QP +R DG I LV+APTREL QI ++ F +
Sbjct: 411 IAETGSGKTLAFLLPAIRHALDQPSLRENDGMIVLVIAPTRELVIQISNESSKFSRAVGL 470
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
+ ++GGA EQ L+RG EI
Sbjct: 471 KTLAIYGGAGIGEQLNALKRGAEI 494
Score = 52.8 bits (121), Expect = 1e-05
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +2
Query: 260 PFNKNFYDPHPTVLKRSPYEVEEYRN-NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 436
PF KNFY ++ +EV+ +R N + V G + PI F + PD + + ++
Sbjct: 326 PFRKNFYVQVSSITNMGEHEVDAFRRANGNIRVYGKKCPRPISSFSQCGLPDPILKILEK 385
Query: 437 MGYKEPTPIQAQGWPIAMSGKNLV 508
Y+ P PIQ Q P M G++++
Sbjct: 386 REYERPFPIQMQCIPALMCGRDVI 409
>UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_14,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 532
Score = 85.0 bits (201), Expect = 2e-15
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+AQTGSGKT+AY+LP +VHI +Q R+ GP+ L+L PTRELA QIQ+ + F +
Sbjct: 114 IAQTGSGKTIAYLLPGLVHIESQ---RKKGGPMMLILVPTRELAMQIQEHISYFSEAYNM 170
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
+ C++GGA KR Q L R +I
Sbjct: 171 NSACIYGGADKRPQEMALARDPDI 194
Score = 54.8 bits (126), Expect = 2e-06
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +2
Query: 218 SEHASPRLGFCFIQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTV--SGVEVHNPIQYF 391
S++A P++ P K F DP + + V EY + H + V + ++V P +
Sbjct: 19 SQYAKPQINST---PIQKVFIDPTQRIYE--DIVVSEYLDEHSIVVEQNDIQVPQPFIEW 73
Query: 392 EEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
++ FP+ + + + Y PTPIQA +PI MSG +L+
Sbjct: 74 KDCQFPNQLNKRISLKAYNRPTPIQASVFPIIMSGHDLI 112
>UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 722
Score = 83.8 bits (198), Expect = 5e-15
Identities = 41/83 (49%), Positives = 52/83 (62%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 693
A+TGSGKTLAY +P I H+ Q P+ +G+GPI +V AP RELA+QI FG +R
Sbjct: 184 AKTGSGKTLAYTIPLIKHVMAQRPLSKGEGPIGIVFAPIRELAEQINTEINKFGKYLNIR 243
Query: 694 NTCVFGGAPKREQARDLERGVEI 762
+ VFGG Q L+RG EI
Sbjct: 244 SVAVFGGTGISNQIGALKRGTEI 266
Score = 44.0 bits (99), Expect = 0.004
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 QPFNKNFYDPHPTVLKRSPYEVEEYRNNH--EVTVSGVEVHNPIQYFEEANFPDYVQQGV 430
+P +K Y P + K EV+E R V G PI+ + E +
Sbjct: 96 EPIHKALYVEVPDIKKLKKEEVKEIRRIELEGCIVKGKNCPKPIRTWSECGINPITMDVI 155
Query: 431 KTMGYKEPTPIQAQGWPIAMSGKNLV 508
K + Y++P+P+Q Q P+ MSG + +
Sbjct: 156 KALKYEKPSPVQRQAIPVIMSGYDAI 181
>UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Putative RNA helicase; n=3; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Putative RNA helicase - Dictyostelium
discoideum (Slime mold)
Length = 1151
Score = 83.8 bits (198), Expect = 5e-15
Identities = 41/84 (48%), Positives = 54/84 (64%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+A+TGSGKTLA++LP HI QP G+G IAL+++PTRELA QI F +
Sbjct: 552 IARTGSGKTLAFLLPMFRHILAQPKSAPGEGMIALIMSPTRELALQIHVECKKFSKVLGL 611
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
R CV+GGA EQ +L+RG +I
Sbjct: 612 RTACVYGGASISEQIAELKRGADI 635
Score = 56.0 bits (129), Expect = 1e-06
Identities = 28/82 (34%), Positives = 46/82 (56%)
Frame = +2
Query: 263 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 442
F KNFY P + + EV ++R+ V ++G + PIQ + +A + V +K
Sbjct: 469 FQKNFYIEVPVLANMTETEVLDFRSELGVKITGKDCPKPIQSWAQAGLTEKVHLLLKKFQ 528
Query: 443 YKEPTPIQAQGWPIAMSGKNLV 508
Y++PT IQAQ P M+G++L+
Sbjct: 529 YEKPTSIQAQTIPAIMNGRDLI 550
>UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n=3;
Piroplasmida|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 707
Score = 83.8 bits (198), Expect = 5e-15
Identities = 40/84 (47%), Positives = 56/84 (66%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
V+QTGSGKTL ++LP ++H+ QPP+ G GPI L+L+PTREL QI + A + +
Sbjct: 362 VSQTGSGKTLTFLLPGLLHLLAQPPVGTG-GPIMLILSPTRELCLQIAEEARPYSRLLNL 420
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
R ++GGA K Q R+L+ G EI
Sbjct: 421 RLVPIYGGASKFAQVRELQNGAEI 444
Score = 53.6 bits (123), Expect = 6e-06
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +2
Query: 269 KNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVE-VHNPIQYFEEANFPDYVQQGVKTMGY 445
K+FYD R E+E H + + G + P+ F+EA F +Q +K +
Sbjct: 280 KDFYDLSYEADSRPGEEIERILKAHNIIIEGEHPLPKPVTTFDEAVFNQQIQNIIKESNF 339
Query: 446 KEPTPIQAQGWPIAMSGKNLV 508
EPTPIQ GW ++G++++
Sbjct: 340 TEPTPIQKVGWTSCLTGRDII 360
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 83.8 bits (198), Expect = 5e-15
Identities = 40/84 (47%), Positives = 57/84 (67%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
VA+TGSGKTL+Y+LP + HI +Q + G+GPI LVL+PTRELA QI++ F T +
Sbjct: 431 VAKTGSGKTLSYVLPMVRHIQDQLFPKPGEGPIGLVLSPTRELALQIEKEILKFSSTMDL 490
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
+ C +GG+ Q +L+RGV +
Sbjct: 491 KVCCCYGGSNIENQISELKRGVNV 514
Score = 35.9 bits (79), Expect = 1.2
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = +2
Query: 263 FNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVKT- 436
F K+FY + E++ R + V G V P + + P+ V ++
Sbjct: 346 FRKHFYQVPFEMSTMDNRELDMLRLELDNVRARGKNVPPPFLTWGQLLMPESVMSVIQND 405
Query: 437 MGYKEPTPIQAQGWPIAMSGKNLV 508
+G+ +P+PIQ Q PI +SG++++
Sbjct: 406 LGFAKPSPIQCQAIPIVLSGRDMI 429
>UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:
ENSANGP00000013118 - Anopheles gambiae str. PEST
Length = 512
Score = 83.4 bits (197), Expect = 6e-15
Identities = 43/86 (50%), Positives = 59/86 (68%), Gaps = 2/86 (2%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGD--GPIALVLAPTRELAQQIQQVAADFGHTS 684
+AQTG+GKTLA++LPA++HI Q PI RG+ GP LVLAPTRELA QI++ A +
Sbjct: 149 IAQTGTGKTLAFLLPALIHIEGQ-PIPRGERGGPNVLVLAPTRELALQIEKEVAKYQFRG 207
Query: 685 YVRNTCVFGGAPKREQARDLERGVEI 762
++ C++GG +R Q + GVEI
Sbjct: 208 -IKAVCLYGGGDRRAQINVVRNGVEI 232
Score = 54.0 bits (124), Expect = 4e-06
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Frame = +2
Query: 260 PFNKNFYDPHPTVLKRSPYEVEEYRN-NHEVTVSGVEVHNPIQYFEEA--NFPDYVQQGV 430
P K FY+ V P +V +R N+ + + NP+ F +A +PD +++ +
Sbjct: 63 PLVKMFYNEREEVANMRPEQVAAFREANNNIDNERKPIPNPVSEFHQAFGEYPDLMEE-L 121
Query: 431 KTMGYKEPTPIQAQGWPIAMSGKNLV 508
+ + PTPIQAQ WPI + G++L+
Sbjct: 122 RKQKFTTPTPIQAQAWPILLRGEDLI 147
>UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helicase
DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
protein HAGE) (Helical antigen).; n=1; Bos taurus|Rep:
Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-)
(DEAD box protein 43) (DEAD box protein HAGE) (Helical
antigen). - Bos Taurus
Length = 597
Score = 83.0 bits (196), Expect = 8e-15
Identities = 36/85 (42%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVAADFGHTSY 687
VAQTG+GKTL+Y++P +HI++QP ++R +GP LVL PTRELA Q+ +++ +
Sbjct: 284 VAQTGTGKTLSYLMPGFIHIDSQPVLQRARNGPGMLVLTPTRELALQVDAECSEYSYRG- 342
Query: 688 VRNTCVFGGAPKREQARDLERGVEI 762
+++ C++GG + Q +DL +G +I
Sbjct: 343 LKSVCIYGGGDRDGQIKDLSKGADI 367
Score = 48.0 bits (109), Expect = 3e-04
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Frame = +2
Query: 254 IQPFNKNFYDPHPTVLKRSPYEVEEYRN-NHEVTVSGVE------VHNPIQYFEEAN--F 406
+ P KNFY S +V+ +R N+ + ++ + NP FE+A +
Sbjct: 190 LPPVKKNFYIESEKTSSMSQEQVDNWRKENYNIICDDLKDGEKRPLPNPTCNFEDAFHCY 249
Query: 407 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
P+ V + ++ G+++PTPIQ+Q WPI + G +L+
Sbjct: 250 PE-VMRNIEKAGFQKPTPIQSQAWPIILQGIDLI 282
>UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Ustilago maydis|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ustilago maydis (Smut fungus)
Length = 1156
Score = 81.8 bits (193), Expect = 2e-14
Identities = 36/84 (42%), Positives = 55/84 (65%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
VA+TGSGKT+A++LP HI +Q P+ +GP+ +++ PTRELA QI + F +
Sbjct: 519 VAKTGSGKTMAFLLPMFRHIKDQRPVEPSEGPVGIIMTPTRELAVQIYREMRPFIKALGL 578
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
R CV+GGAP EQ ++++ +I
Sbjct: 579 RAACVYGGAPISEQIAEMKKTADI 602
Score = 55.2 bits (127), Expect = 2e-06
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 433
+PFNK FY P + S + R + +TV G + P+ + P +K
Sbjct: 433 EPFNKAFYHPPAEIQDMSEELANQIRLEMDAITVRGRDCPKPLTKWSHCGLPASCLDVIK 492
Query: 434 TMGYKEPTPIQAQGWPIAMSGKNLV 508
+GY PTPIQ+Q P MSG++++
Sbjct: 493 RLGYSAPTPIQSQAMPAIMSGRDII 517
>UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n=2;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium falciparum (isolate 3D7)
Length = 1490
Score = 81.0 bits (191), Expect = 3e-14
Identities = 36/89 (40%), Positives = 58/89 (65%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
++ +A+TGSGKTL+Y+ P I H+ +Q P+R DGPI+++L PTREL+ Q++ A +
Sbjct: 761 RDVIAIAETGSGKTLSYLFPVIRHVLHQEPLRNNDGPISIILTPTRELSIQVKNEAKIYC 820
Query: 676 HTSYVRNTCVFGGAPKREQARDLERGVEI 762
+ V+GG+ Q + L++GVEI
Sbjct: 821 KAVNIEILAVYGGSNIARQLKVLKKGVEI 849
Score = 46.4 bits (105), Expect = 8e-04
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +2
Query: 260 PFNKNFYDPHPTVLKRSPYEVEEYR-NNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 436
P KN Y + +V+ +R NN + V G P+QYF + P + Q ++
Sbjct: 681 PIKKNIYVQVKEITNMKDSDVDMFRKNNGNIIVRGKNCPRPVQYFYQCGLPSKILQILEK 740
Query: 437 MGYKEPTPIQAQGWPIAMSGKNLVA 511
+K+ IQ Q P M G++++A
Sbjct: 741 KNFKKMYNIQMQTIPALMCGRDVIA 765
>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 521
Score = 81.0 bits (191), Expect = 3e-14
Identities = 38/84 (45%), Positives = 54/84 (64%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+A+TGSGKT ++++PA++HI+ Q I DGPI LVL+PTRELA Q +VAA F
Sbjct: 128 IAKTGSGKTASFLIPALMHISAQRKISENDGPIVLVLSPTRELALQTDEVAAQFCVKMGY 187
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
++ C++GG + Q L EI
Sbjct: 188 KHVCIYGGEDRHRQINKLRFHPEI 211
Score = 41.9 bits (94), Expect = 0.018
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +2
Query: 317 EVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 496
E ++Y +++ + G + FEE N P + + +K + PTPIQ+ PI + G
Sbjct: 63 EQKKYLEKNQIKLLGENIPPVAVTFEELNLPQEIMEVIKENNWTNPTPIQSLSIPIGLKG 122
Query: 497 KNLV 508
++V
Sbjct: 123 NDMV 126
>UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53; n=2; Equus
caballus|Rep: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53 - Equus caballus
Length = 711
Score = 80.2 bits (189), Expect = 6e-14
Identities = 36/85 (42%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIR-RGDGPIALVLAPTRELAQQIQQVAADFGHTSY 687
VAQTG+GKTL+Y++P +H+++QP R +GP LVL PTRELA Q++ + + +
Sbjct: 348 VAQTGTGKTLSYLIPGFIHLDSQPISREERNGPGMLVLTPTRELALQVEAECSKYSYKG- 406
Query: 688 VRNTCVFGGAPKREQARDLERGVEI 762
+++ CV+GG ++EQ + + +GV+I
Sbjct: 407 LKSVCVYGGGNRKEQIQHITKGVDI 431
Score = 53.6 bits (123), Expect = 6e-06
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Frame = +2
Query: 254 IQPFNKNFYDPHPTVLKRSPYEVEEYRN-NHEVTVSGVE------VHNPIQYFEEA--NF 406
+ P KNFY S +V+ +R N +T ++ + NP FE+A ++
Sbjct: 254 LPPIKKNFYVESTATSSLSQVQVDAWRQENFNITCEDLKDGEKRPIPNPTCKFEDAFEHY 313
Query: 407 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
P+ V + +K G++ PTPIQ+Q WPI + G +L+
Sbjct: 314 PE-VLKSIKKAGFQRPTPIQSQAWPIVLQGMDLI 346
>UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 535
Score = 79.8 bits (188), Expect = 7e-14
Identities = 36/85 (42%), Positives = 47/85 (55%)
Frame = +2
Query: 254 IQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 433
+ PF KNFY P R EV Y +E+ V+G E + FEE NFP + +K
Sbjct: 110 LPPFEKNFYVESPITANRDAEEVSRYLQENEIQVNGCESIKALLTFEECNFPQSILDVIK 169
Query: 434 TMGYKEPTPIQAQGWPIAMSGKNLV 508
Y +PTPIQA GWPI + GK++V
Sbjct: 170 EQNYIKPTPIQAIGWPIVLQGKDVV 194
Score = 79.0 bits (186), Expect = 1e-13
Identities = 36/89 (40%), Positives = 56/89 (62%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
K+ +A+TGSGKT+++++PAI+HI + P + +GP L+LAPTREL QI A F
Sbjct: 191 KDVVGIAETGSGKTISFLIPAIIHILDTPLAQYREGPRVLILAPTRELVCQIADEAIKFT 250
Query: 676 HTSYVRNTCVFGGAPKREQARDLERGVEI 762
+ ++ FGG P+ Q +D + G +I
Sbjct: 251 KGTAIKTVRCFGGVPQSSQMKDFQSGCDI 279
>UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Phaeosphaeria nodorum|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 1149
Score = 79.8 bits (188), Expect = 7e-14
Identities = 41/105 (39%), Positives = 61/105 (58%)
Frame = +1
Query: 439 GLQRTDAYSSSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 618
G R A + + + ++ VA+TGSGKTLA+ +P I H+ +Q P++ DGPI L+
Sbjct: 528 GYARPTAIQAQAIPIAESGRDLIGVAKTGSGKTLAFGIPMIRHVLDQRPLKPADGPIGLI 587
Query: 619 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG 753
LAPTREL+ QI F + S + C +GG P +Q ++RG
Sbjct: 588 LAPTRELSLQIVNELKPFLNASGITIKCAYGGQPISDQIAMIKRG 632
Score = 46.8 bits (106), Expect = 6e-04
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 433
+PF K+FY + + S +V + R+ + + V +V P+ + +
Sbjct: 466 EPFRKDFYTEPAEITQMSAEDVADLRHELDGIKVKPDDVPRPVTKWAQMGLLQQTMDVFT 525
Query: 434 TMGYKEPTPIQAQGWPIAMSGKNLV 508
+GY PT IQAQ PIA SG++L+
Sbjct: 526 RVGYARPTAIQAQAIPIAESGRDLI 550
>UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 730
Score = 79.4 bits (187), Expect = 1e-13
Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 4/88 (4%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFGH 678
VA+TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQI++ FG
Sbjct: 344 VAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGK 403
Query: 679 TSYVRNTCVFGGAPKREQARDLERGVEI 762
++ V GGA + +Q L GVE+
Sbjct: 404 LLGIKTVSVIGGASREDQGMKLRMGVEV 431
Score = 61.3 bits (142), Expect = 3e-08
Identities = 25/60 (41%), Positives = 39/60 (65%)
Frame = +2
Query: 329 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
+R + +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
>UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1072
Score = 78.6 bits (185), Expect = 2e-13
Identities = 34/84 (40%), Positives = 55/84 (65%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+A+TGSGKT+A++LP + H+ +Q P+ +GPIA+V++PTRELA QI + F +
Sbjct: 446 IAKTGSGKTVAFLLPMLRHVRDQRPVSGSEGPIAVVMSPTRELASQIYKECQPFLKVLNI 505
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
R +C GG+ E +++G E+
Sbjct: 506 RASCCVGGSSISEDIAAMKKGAEV 529
Score = 48.4 bits (110), Expect = 2e-04
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 433
+PF K FY P VL+ E E R + + + G + P++ + P +K
Sbjct: 360 EPFRKAFYVPPVEVLEMDEEEAELVRLEMDGIKIRGQDAPKPVRNWGAFGLPQGCLDVIK 419
Query: 434 TMGYKEPTPIQAQGWPIAMSGKNLV 508
G++ PT IQAQ P MSG++++
Sbjct: 420 HQGWETPTSIQAQAIPAIMSGRDVI 444
>UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=7;
Bilateria|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 741
Score = 78.2 bits (184), Expect = 2e-13
Identities = 40/87 (45%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGD---GPIALVLAPTRELAQQIQQVAADFGHT 681
+AQTG+GKTLA++LPA +HI Q P+ RG+ GP LV+APTRELA QI++ +
Sbjct: 366 IAQTGTGKTLAFLLPAFIHIEGQ-PVPRGEARGGPNVLVMAPTRELALQIEKEVFKYQFR 424
Query: 682 SYVRNTCVFGGAPKREQARDLERGVEI 762
++ C++GG +R Q ++ GVEI
Sbjct: 425 D-IKAICLYGGGDRRTQINKVKGGVEI 450
Score = 62.5 bits (145), Expect = 1e-08
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 12/92 (13%)
Frame = +2
Query: 269 KNFYDPHPTVLKRSPYEVEEYR-NNHEVTVS---------GVEVHNPIQYFEEA--NFPD 412
KNFY+ P V +P EV E+R N+ + V + NP+Q FE+A +P+
Sbjct: 274 KNFYNELPEVANMTPEEVSEFRCANNNIVVDRTFKDADKPSAPIPNPVQTFEQAFHEYPE 333
Query: 413 YVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
+++ +K G+ +P+PIQAQ WP+ + G++L+
Sbjct: 334 LLEE-IKKQGFAKPSPIQAQAWPVLLKGEDLI 364
>UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 573
Score = 77.4 bits (182), Expect = 4e-13
Identities = 40/84 (47%), Positives = 52/84 (61%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+++TGSGKTL++ILPAI HI QP GP LV+APTRELA QI Q A + +
Sbjct: 182 ISKTGSGKTLSFILPAIEHILAQPRQSYYPGPSVLVVAPTRELANQINQEAEQYLRLVNI 241
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
++GGAP+R Q L R +I
Sbjct: 242 EIATIYGGAPRRSQQLQLSRRPKI 265
Score = 37.5 bits (83), Expect = 0.39
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 377 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
PI E F ++ + +++PTP+Q+ GWPIA+SG +++
Sbjct: 138 PIDTIESVPFQSTIKNFLSKK-FEKPTPVQSLGWPIALSGSDML 180
>UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;
n=8; Viridiplantae|Rep: DEAD-box ATP-dependent RNA
helicase 21 - Arabidopsis thaliana (Mouse-ear cress)
Length = 733
Score = 77.4 bits (182), Expect = 4e-13
Identities = 38/87 (43%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVAADFGHT 681
+A+TGSGKT A++LP + +I+ PP+ +GP A+V+APTRELAQQI++ F H
Sbjct: 356 IAETGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHY 415
Query: 682 SYVRNTCVFGGAPKREQARDLERGVEI 762
R T + GG EQ + +G EI
Sbjct: 416 LGFRVTSIVGGQSIEEQGLKITQGCEI 442
Score = 39.9 bits (89), Expect = 0.073
Identities = 14/60 (23%), Positives = 34/60 (56%)
Frame = +2
Query: 329 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
+R + ++ G + P++ +EE+ + + V+ GYK+P+PIQ P+ + ++++
Sbjct: 295 FREDFNISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVI 354
>UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena
thermophila SB210|Rep: CLN3 protein - Tetrahymena
thermophila SB210
Length = 1138
Score = 77.0 bits (181), Expect = 5e-13
Identities = 36/84 (42%), Positives = 54/84 (64%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
VA+TGSGKT++Y+ P ++HI +Q + + +GPI L+LAPTREL QQ+ + + +
Sbjct: 105 VAKTGSGKTVSYLWPLLIHILDQRELEKNEGPIGLILAPTRELCQQVYTESKRYAKIYNI 164
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
+ GG K EQ + L+ GVEI
Sbjct: 165 SVGALLGGENKHEQWKMLKAGVEI 188
Score = 69.7 bits (163), Expect = 8e-11
Identities = 30/84 (35%), Positives = 48/84 (57%)
Frame = +2
Query: 257 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 436
+ F KNFY HP + K + +VE+ R E+ VSGV PI F F + + + +
Sbjct: 20 EAFTKNFYQEHPDITKLTEQQVEKIRKEFEIKVSGVRPPKPIVSFGHLGFDEELMRQITK 79
Query: 437 MGYKEPTPIQAQGWPIAMSGKNLV 508
+G+++PT IQ Q P +SG+++V
Sbjct: 80 LGFEKPTQIQCQALPCGLSGRDIV 103
>UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 586
Score = 76.6 bits (180), Expect = 7e-13
Identities = 40/85 (47%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRR-GDGPIALVLAPTRELAQQIQQVAADFGHTSY 687
+A TGSGKTLA++LPA++ I + P G P+ LV+APTRELAQQI++V +
Sbjct: 153 LAATGSGKTLAFLLPALLKIISLPKRPSYGATPLVLVMAPTRELAQQIEEVCKTSIRGTS 212
Query: 688 VRNTCVFGGAPKREQARDLERGVEI 762
+R C +GG K +Q+R L GV+I
Sbjct: 213 IRQLCAYGGLGKIDQSRILRNGVDI 237
Score = 49.6 bits (113), Expect = 9e-05
Identities = 24/61 (39%), Positives = 31/61 (50%)
Frame = +2
Query: 326 EYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 505
E+R H V + G NP Q F + FP Q + G+ PT IQ Q WPI + G +L
Sbjct: 93 EWRKKHNVLIEGKSQPNPFQKFTDYEFPRMFQHIFQ--GFTAPTVIQGQSWPIILGGNDL 150
Query: 506 V 508
V
Sbjct: 151 V 151
>UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_100,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 737
Score = 76.6 bits (180), Expect = 7e-13
Identities = 34/84 (40%), Positives = 52/84 (61%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
VA+TGSGKT+AY+ P +VH++ Q + + +GPI LV+ PTREL QQ+ + +
Sbjct: 231 VAKTGSGKTIAYVWPMLVHVSAQRAVEKKEGPIGLVVVPTRELGQQVYLETKKYAQLFQI 290
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
+ + GG K Q ++L GV+I
Sbjct: 291 SVSALLGGENKHHQWKELRAGVDI 314
Score = 51.6 bits (118), Expect = 2e-05
Identities = 22/84 (26%), Positives = 41/84 (48%)
Frame = +2
Query: 257 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 436
+ F NFY H + + +VE+ + +++ V G V PI F + +
Sbjct: 146 EEFESNFYQEHEEIANLNVAQVEKIKREYQIHVKGNNVPKPIISFGHLQLDQKLVNKIVA 205
Query: 437 MGYKEPTPIQAQGWPIAMSGKNLV 508
+++PT IQ+Q P +SG+N++
Sbjct: 206 QNFEKPTAIQSQALPCVLSGRNVI 229
>UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomyces cerevisiae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 849
Score = 76.6 bits (180), Expect = 7e-13
Identities = 36/86 (41%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADFGHT-S 684
+++TGSGKT++Y+LP + + Q P+ + + GP+ L+LAPTRELA QI + F +
Sbjct: 299 ISKTGSGKTISYLLPLLRQVKAQRPLSKHETGPMGLILAPTRELALQIHEEVTKFTEADT 358
Query: 685 YVRNTCVFGGAPKREQARDLERGVEI 762
+R+ C GG+ ++Q DL+RG EI
Sbjct: 359 SIRSVCCTGGSEMKKQITDLKRGTEI 384
Score = 45.2 bits (102), Expect = 0.002
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +2
Query: 254 IQPFNKNFYDPHPTVLKRSPYEVEEYR-NNHEVTVSGVEVHNPIQYFEEANF-PDYVQQG 427
++PF KNFY TV S EVEE R + + + G P+ + + D +
Sbjct: 211 LEPFQKNFYIESETVSSMSEMEVEELRLSLDNIKIKGTGCPKPVTKWSQLGLSTDTMVLI 270
Query: 428 VKTMGYKEPTPIQAQGWPIAMSGKNLV 508
+ + + TPIQ+Q P MSG++++
Sbjct: 271 TEKLHFGSLTPIQSQALPAIMSGRDVI 297
>UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=3; Trypanosoma|Rep: ATP-dependent DEAD/H RNA
helicase, putative - Trypanosoma brucei
Length = 660
Score = 76.2 bits (179), Expect = 9e-13
Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 6/95 (6%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAI----VHINNQPPIRRGD--GPIALVLAPTRELAQQIQQ 657
++ AQTGSGKT +Y++PAI ++I+N+PP G P AL+LAPTREL+ QI
Sbjct: 195 RDLMACAQTGSGKTASYLIPAINEILLNISNRPPYSPGSHSSPQALILAPTRELSLQIYG 254
Query: 658 VAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
A F + + VR V+GGA R Q +L RG ++
Sbjct: 255 EARKFTYHTPVRCVVVYGGADPRHQVHELSRGCKL 289
Score = 40.7 bits (91), Expect = 0.042
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +2
Query: 377 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
P+ F E N + + VK GY +PTP+Q+ G P A++ ++L+A
Sbjct: 155 PVLSFSEMNMVPVLLENVKRCGYTKPTPVQSLGIPTALNHRDLMA 199
>UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX43;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX43 - Homo sapiens (Human)
Length = 648
Score = 76.2 bits (179), Expect = 9e-13
Identities = 36/85 (42%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIR-RGDGPIALVLAPTRELAQQIQQVAADFGHTSY 687
VAQTG+GKTL Y++P +H+ QP ++ + + P LVL PTRELA Q++ + +
Sbjct: 285 VAQTGTGKTLCYLMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECCKYSYKG- 343
Query: 688 VRNTCVFGGAPKREQARDLERGVEI 762
+R+ CV+GG + EQ +L++GV+I
Sbjct: 344 LRSVCVYGGGNRDEQIEELKKGVDI 368
Score = 51.6 bits (118), Expect = 2e-05
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Frame = +2
Query: 254 IQPFNKNFYDPHPTVLKRSPYEVEEYRN-NHEVTVSGVE------VHNPIQYFEEAN--F 406
+ P KNFY S E + +R N +T ++ + NP F++A +
Sbjct: 191 LPPIKKNFYKESTATSAMSKVEADSWRKENFNITWDDLKDGEKRPIPNPTCTFDDAFQCY 250
Query: 407 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
P+ V + +K G+++PTPIQ+Q WPI + G +L+
Sbjct: 251 PE-VMENIKKAGFQKPTPIQSQAWPIVLQGIDLI 283
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 76.2 bits (179), Expect = 9e-13
Identities = 40/88 (45%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRR----GDGPIALVLAPTRELAQQIQQVAADFGH 678
VA+TGSGKT A+++P +V I P I R GP A++LAPTRELAQQI++ FG
Sbjct: 434 VAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGK 493
Query: 679 TSYVRNTCVFGGAPKREQARDLERGVEI 762
+R V GG + +Q L G EI
Sbjct: 494 PLGIRTVAVIGGISREDQGFRLRMGCEI 521
Score = 55.2 bits (127), Expect = 2e-06
Identities = 19/60 (31%), Positives = 40/60 (66%)
Frame = +2
Query: 329 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
+R ++ +T G ++ NPI+ +++++ P ++ + + GYKEPTPIQ Q PI + ++++
Sbjct: 373 FREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDII 432
>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 834
Score = 75.8 bits (178), Expect = 1e-12
Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Frame = +1
Query: 439 GLQRTDAYSSSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHINNQPPIRR---GDGPI 609
G ++ + S ++ +A+TGSGKT A+++P +++I+ QP + + DGP
Sbjct: 432 GYEKPSPIQMQSIPISLTGRDILGIAETGSGKTCAFVIPMLIYISKQPRLTKDTEADGPY 491
Query: 610 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
ALV+APTREL QQI++ +F R + GG +QA + +G EI
Sbjct: 492 ALVMAPTRELVQQIEKETRNFAQHFGFRVVSLVGGQSIEDQAYQVSKGCEI 542
Score = 51.2 bits (117), Expect = 3e-05
Identities = 17/60 (28%), Positives = 41/60 (68%)
Frame = +2
Query: 329 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
++ + ++ G NPI+ ++E+N P + + ++ +GY++P+PIQ Q PI+++G++++
Sbjct: 395 FKEDFNISTKGGIAPNPIRTWQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTGRDIL 454
>UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n=4;
Plasmodium (Vinckeia)|Rep: ATP-dependent RNA helicase,
putative - Plasmodium berghei
Length = 1312
Score = 75.4 bits (177), Expect = 2e-12
Identities = 34/89 (38%), Positives = 57/89 (64%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
++ +A+TGSGKT++Y+ P I H+ +Q +R DGPI ++L PTREL+ Q++ A+ +
Sbjct: 607 RDIIAIAETGSGKTISYLFPLIRHVLHQDKLRNNDGPIGIILTPTRELSIQVKNEASIYC 666
Query: 676 HTSYVRNTCVFGGAPKREQARDLERGVEI 762
++ V+GG+ Q L++GVEI
Sbjct: 667 KAVDLKILAVYGGSNIGAQLNVLKKGVEI 695
Score = 47.6 bits (108), Expect = 4e-04
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +2
Query: 260 PFNKNFYDPHPTVLKRSPYEVEEYR-NNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 436
P KN Y + + +VE +R NN + V G PIQYF + P + ++
Sbjct: 527 PIKKNVYVQVSEITNMTEKDVEMFRKNNGNIVVRGKNCPRPIQYFYQCGLPGKILNILEK 586
Query: 437 MGYKEPTPIQAQGWPIAMSGKNLVA 511
+K+ IQ Q P M G++++A
Sbjct: 587 KNFKKMFSIQMQAIPALMCGRDIIA 611
>UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 872
Score = 75.4 bits (177), Expect = 2e-12
Identities = 38/86 (44%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADF-GHTS 684
+++TGSGKT++YILP + I Q + + + GP+ L+LAPTRELA QI + F
Sbjct: 320 ISKTGSGKTISYILPMLRQIKAQRTLSKNETGPLGLILAPTRELALQINEEVEKFTKQDR 379
Query: 685 YVRNTCVFGGAPKREQARDLERGVEI 762
+R C GG+ ++Q DL+RGVEI
Sbjct: 380 SIRTICCTGGSEMKKQINDLKRGVEI 405
Score = 45.2 bits (102), Expect = 0.002
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +2
Query: 254 IQPFNKNFYDPHPTVLKRSPYEVEEYRNN-HEVTVSGVEVHNPIQYFEEANFP-DYVQQG 427
++PF K+FY V + EVEE R + + V G I + + P D +
Sbjct: 232 LEPFPKSFYSEPDEVKLMTDDEVEEMRLSLGGIKVKGKHCPKLITRWSQLGLPTDIMNLI 291
Query: 428 VKTMGYKEPTPIQAQGWPIAMSGKNLV 508
K + Y EPT IQ+Q P MSG++L+
Sbjct: 292 TKELKYDEPTAIQSQAIPAIMSGRDLI 318
>UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Candida glabrata|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 816
Score = 74.9 bits (176), Expect = 2e-12
Identities = 36/87 (41%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADFGHTSY 687
+++TGSGKT++Y+LP I H+ Q +R G+ GPIA++ APTRELA QI +
Sbjct: 295 ISKTGSGKTISYLLPMIRHVKAQKKLRNGETGPIAVIFAPTRELAVQINEEVQKLISDLD 354
Query: 688 VRNTCVFGGAPKREQARDLERGVEISL 768
+ + C GG+ ++Q L+ GVEI++
Sbjct: 355 ISSICCTGGSDLKKQIDKLKTGVEIAI 381
Score = 36.3 bits (80), Expect = 0.90
Identities = 20/87 (22%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +2
Query: 254 IQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGV 430
+ P +K Y+ + + E+ + R + + + + G + P+ + + P + + +
Sbjct: 207 LDPISKCLYNEPEEIKSYTEDEIADLRLDLDNIKIEGKDCPRPVTKWSQLGIPYDIIRFI 266
Query: 431 KTM-GYKEPTPIQAQGWPIAMSGKNLV 508
K + YK TPIQ Q P MSG++++
Sbjct: 267 KDVFSYKSLTPIQTQTIPAIMSGRDVI 293
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 74.5 bits (175), Expect = 3e-12
Identities = 39/89 (43%), Positives = 53/89 (59%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
K+ +AQTG+GKT A+ LP I + P +G A++L+PTRELA QI + FG
Sbjct: 141 KDLVGLAQTGTGKTAAFALPLIQQLLMNPIAIKGRSARAIILSPTRELALQIHEAFVSFG 200
Query: 676 HTSYVRNTCVFGGAPKREQARDLERGVEI 762
+ T GGAP R+Q RDL +GV+I
Sbjct: 201 KRLPLNFTHAIGGAPIRKQMRDLSKGVDI 229
>UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 504
Score = 74.5 bits (175), Expect = 3e-12
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 6/90 (6%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQ-PPIRRGD-----GPIALVLAPTRELAQQIQQVAADF 672
V+QTGSGKTLA++LPA++HI+ Q + D P LVL+PTRELAQQI+ +
Sbjct: 127 VSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKY 186
Query: 673 GHTSYVRNTCVFGGAPKREQARDLERGVEI 762
+ Y ++ C++GG + EQ GVEI
Sbjct: 187 SYNGY-KSVCLYGGGSRPEQVEACRGGVEI 215
Score = 41.9 bits (94), Expect = 0.018
Identities = 26/96 (27%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Frame = +2
Query: 245 FCFIQPFNKNFYDPHPTVLKRSPYEVEE-YRNNHEVTV------SGVEVHNPIQYFEEAN 403
F +++P ++ Y SP +++E Y N + V S V++ P+ FE+A
Sbjct: 30 FSWMKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAF 89
Query: 404 FPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLV 508
+ G ++ G+++P+PIQ+Q WP+ +SG++ +
Sbjct: 90 GSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCI 125
>UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 578
Score = 74.1 bits (174), Expect = 4e-12
Identities = 40/94 (42%), Positives = 56/94 (59%), Gaps = 8/94 (8%)
Frame = +1
Query: 505 SCVAQTGSGKTLAYILPAIVHINNQPPIRRGDG--------PIALVLAPTRELAQQIQQV 660
SC AQTGSGKT A++ P I I PP+ R P+AL+LAPTREL QQI +
Sbjct: 173 SC-AQTGSGKTAAFLFPIISDILKNPPMPRQSNFSHRVTVFPVALILAPTRELGQQIYEE 231
Query: 661 AADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
A F + +R+ CV+GG+ Q +++ +G +I
Sbjct: 232 AVRFTEDTPIRSVCVYGGSDSYTQIQEMGKGCDI 265
>UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6;
Plasmodium|Rep: Snrnp protein, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1123
Score = 73.7 bits (173), Expect = 5e-12
Identities = 39/87 (44%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIR---RGDGPIALVLAPTRELAQQIQQVAADFGHT 681
+A+TGSGKT A++LP + ++ PP+ DGP ALV+AP+RELA QI + F
Sbjct: 741 IAETGSGKTAAFVLPMLSYVKQLPPLTYETSQDGPYALVIAPSRELAIQIYEETNKFASY 800
Query: 682 SYVRNTCVFGGAPKREQARDLERGVEI 762
R V GG QA +L RGVEI
Sbjct: 801 CSCRTVAVVGGRNAEAQAFELRRGVEI 827
Score = 48.8 bits (111), Expect = 2e-04
Identities = 21/60 (35%), Positives = 39/60 (65%)
Frame = +2
Query: 329 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
+R ++E+ + G V PI+ +EE+N + + + +K Y++PTPIQ Q PIA+ ++L+
Sbjct: 680 FREDNEIYIKGGVVPPPIRKWEESNLSNDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLI 739
>UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila
melanogaster|Rep: LD33749p - Drosophila melanogaster
(Fruit fly)
Length = 703
Score = 73.7 bits (173), Expect = 5e-12
Identities = 41/86 (47%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQ--PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 684
+AQTG+GKTLA++LP ++H Q P RG G LVLAPTRELA QI+ +
Sbjct: 326 IAQTGTGKTLAFLLPGMIHTEYQSTPRGTRG-GANVLVLAPTRELALQIEMEVKKYSFRG 384
Query: 685 YVRNTCVFGGAPKREQARDLERGVEI 762
++ CV+GG + Q DLERG EI
Sbjct: 385 -MKAVCVYGGGNRNMQISDLERGAEI 409
Score = 60.1 bits (139), Expect = 6e-08
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 13/96 (13%)
Frame = +2
Query: 260 PFNKNFYDPHPTVLKRSPYEVEEYRN-NHEVTVSGV----------EVHNPIQYFEE--A 400
P KNFY P V + E+E R N+++TVS V + NP+ FE+ A
Sbjct: 230 PLTKNFYKEAPEVANLTKSEIERIREENNKITVSYVFEPKEGETSPPIPNPVWTFEQCFA 289
Query: 401 NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
+PD +++ K MG+ +P+PIQ+Q WPI + G +++
Sbjct: 290 EYPDMLEEITK-MGFSKPSPIQSQAWPILLQGHDMI 324
>UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;
n=22; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
52 - Arabidopsis thaliana (Mouse-ear cress)
Length = 646
Score = 73.3 bits (172), Expect = 6e-12
Identities = 40/94 (42%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDG-----PIALVLAPTRELAQQIQQV 660
++ AQTGSGKT A+ P I I I R G P+A++L+PTRELA QI
Sbjct: 184 RDLMACAQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDE 243
Query: 661 AADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
A F + + V+ +GG P +Q R+LERGV+I
Sbjct: 244 ARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDI 277
Score = 37.5 bits (83), Expect = 0.39
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +2
Query: 260 PF-NKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 436
PF N DP + + E Y + + SG V P+ F E + + + ++
Sbjct: 105 PFGNDGNADPAVNEQENTVINFEAYEDI-PIETSGDNVPPPVNTFAEIDLGEALNLNIQR 163
Query: 437 MGYKEPTPIQAQGWPIAMSGKNLVA 511
Y +PTP+Q PI +G++L+A
Sbjct: 164 CKYVKPTPVQRNAIPILAAGRDLMA 188
>UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomycetaceae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 816
Score = 72.5 bits (170), Expect = 1e-11
Identities = 38/87 (43%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADF--GHT 681
+++TGSGKT+++ILP + I Q P+ + GP+ L+L+PTRELA QI + F G
Sbjct: 280 ISKTGSGKTVSFILPLLRQIKAQRPLGGDETGPLGLILSPTRELALQIHEEVTKFTSGDP 339
Query: 682 SYVRNTCVFGGAPKREQARDLERGVEI 762
S +R+ C GG+ + Q D++RGVEI
Sbjct: 340 S-IRSLCCTGGSELKRQINDIKRGVEI 365
Score = 44.4 bits (100), Expect = 0.003
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Frame = +2
Query: 254 IQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGV 430
++PF KNFY + K S EV + R + + V V G + PI + + + +
Sbjct: 192 LKPFIKNFYQEPEEISKLSEEEVADLRLSLDNVQVRGRDCPRPILKWSQLGLNSGIMNLL 251
Query: 431 -KTMGYKEPTPIQAQGWPIAMSGKNLV 508
+ + + PTPIQAQ P MSG++++
Sbjct: 252 TRELEFTVPTPIQAQAIPAIMSGRDVI 278
>UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase prp28; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase prp28 -
Schizosaccharomyces pombe (Fission yeast)
Length = 662
Score = 72.5 bits (170), Expect = 1e-11
Identities = 40/92 (43%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGD---GPIALVLAPTRELAQQIQQVAA 666
K+ +A+TGSGKT A+I+P I+ I+ PP+ + GP A+VLAPTRELAQQIQ
Sbjct: 287 KDLIGIAETGSGKTAAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQVEGN 346
Query: 667 DFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
F R V GG EQ+ + +G I
Sbjct: 347 KFAEPLGFRCVSVVGGHAFEEQSFQMSQGAHI 378
Score = 45.6 bits (103), Expect = 0.001
Identities = 17/59 (28%), Positives = 37/59 (62%)
Frame = +2
Query: 332 RNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
+ ++ +++ G ++ NP++ +EEA P + + +K + YKEP+ IQ P+ + K+L+
Sbjct: 232 KEDYNISIKGDDLPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRKDLI 290
>UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;
Metazoa|Rep: ATP-dependent RNA helicase DDX3X - Homo
sapiens (Human)
Length = 662
Score = 72.1 bits (169), Expect = 1e-11
Identities = 45/102 (44%), Positives = 57/102 (55%), Gaps = 13/102 (12%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPP-------------IRRGDGPIALVLAPTRE 636
++ AQTGSGKT A++LP + I + P RR PI+LVLAPTRE
Sbjct: 218 RDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRE 277
Query: 637 LAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
LA QI + A F + S VR V+GGA +Q RDLERG +
Sbjct: 278 LAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHL 319
>UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=16; Pezizomycotina|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Coccidioides immitis
Length = 817
Score = 71.7 bits (168), Expect = 2e-11
Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPI-----RRGDGPIALVLAPTRELAQQIQQVAADFG 675
VA TGSGKT A++LP +V+I P + R+ DGP A++LAPTRELAQQI+ A F
Sbjct: 420 VAVTGSGKTAAFLLPLLVYIAELPRLDEFEWRKSDGPYAIILAPTRELAQQIENEARKFC 479
Query: 676 HTSYVRNTCVFGGAPKREQARDLERGVEI 762
+ + GG EQ+ L G EI
Sbjct: 480 NPLGFNVVSIVGGHSLEEQSFSLRNGAEI 508
Score = 44.4 bits (100), Expect = 0.003
Identities = 16/60 (26%), Positives = 36/60 (60%)
Frame = +2
Query: 329 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
++ + ++ G + NP++ + E+ P + + + +GYK+P+PIQ PIA+ ++L+
Sbjct: 359 FKEDFNISTKGGSIPNPMRSWGESGLPKRLLEIIDKVGYKDPSPIQRAAIPIALQNRDLI 418
>UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=7; Trypanosomatidae|Rep: ATP-dependent
DEAD/H RNA helicase, putative - Leishmania major
Length = 685
Score = 71.3 bits (167), Expect = 3e-11
Identities = 34/89 (38%), Positives = 50/89 (56%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
++ A+TGSGKTL Y LP I H +QP +G+GPI LVL PT+ELA Q+ + + G
Sbjct: 85 RDLLLTAKTGSGKTLCYALPLIRHCADQPRCEKGEGPIGLVLVPTQELAMQVFTLLDELG 144
Query: 676 HTSYVRNTCVFGGAPKREQARDLERGVEI 762
+ +R +G + R + G E+
Sbjct: 145 EAARLRCVASYGSTSLSDNIRHAKVGCEL 173
Score = 41.1 bits (92), Expect = 0.032
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +2
Query: 260 PFNKNFYDPHPTVLKRSPYEVEEY-RNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 436
P +FY P + + E+ E R V G +V PI+ + PD V + ++
Sbjct: 5 PIRTDFYVVPPDMTNLTAQEMRELLRELDGAKVRGQDVPRPIRSWHGTGLPDRVLEVLEE 64
Query: 437 MGYKEPTPIQAQGWPIAMSGKNLV 508
YK P +Q+ G P MSG++L+
Sbjct: 65 HEYKCPFAVQSLGVPALMSGRDLL 88
>UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase
PRP28, putative; n=2; Eukaryota|Rep: Pre-mRNA splicing
factor RNA helicase PRP28, putative - Plasmodium vivax
Length = 1006
Score = 71.3 bits (167), Expect = 3e-11
Identities = 37/87 (42%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIR---RGDGPIALVLAPTRELAQQIQQVAADFGHT 681
+A+TGSGKT A++LP + ++ PP+ DGP AL++AP+RELA QI F
Sbjct: 624 IAETGSGKTAAFVLPMLAYVKQLPPLTYETSQDGPYALIIAPSRELAIQIFDETNKFASY 683
Query: 682 SYVRNTCVFGGAPKREQARDLERGVEI 762
R V GG QA +L +GVEI
Sbjct: 684 CSCRTVAVVGGRNAEAQAFELRKGVEI 710
Score = 48.0 bits (109), Expect = 3e-04
Identities = 21/60 (35%), Positives = 38/60 (63%)
Frame = +2
Query: 329 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
+R ++E+ + G V PI+ +EE+N + + +K Y++PTPIQ Q PIA+ ++L+
Sbjct: 563 FREDNEIYIKGGIVPPPIRRWEESNLSSDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLI 622
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 70.9 bits (166), Expect = 3e-11
Identities = 37/89 (41%), Positives = 51/89 (57%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
K+ +AQTG+GKT A+ LP+I ++ P R G L+L+PTRELA QI + D+
Sbjct: 44 KDLCGIAQTGTGKTAAFALPSIHYLATNPQARPQRGCRMLILSPTRELASQIARACNDYT 103
Query: 676 HTSYVRNTCVFGGAPKREQARDLERGVEI 762
+ VFGG P Q R L+RG +I
Sbjct: 104 RHLRMSVNAVFGGVPIGRQMRMLDRGTDI 132
Score = 34.3 bits (75), Expect = 3.6
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 505
F+ + Q + +GY +PTPIQAQ P + GK+L
Sbjct: 8 FKTLGLDSSLVQALDGLGYSKPTPIQAQAIPHLLEGKDL 46
>UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein
precursor; n=2; Actinomycetales|Rep: DEAD/DEAH box
helicase domain protein precursor - Nocardioides sp.
(strain BAA-499 / JS614)
Length = 507
Score = 70.9 bits (166), Expect = 3e-11
Identities = 38/112 (33%), Positives = 57/112 (50%)
Frame = +1
Query: 433 DNGLQRTDAYSSSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 612
D G+ + ++ L DS ++ +TGSGKT A++LP + + + P A
Sbjct: 25 DRGIVQPTPIQAATLPDSLAGRDVLGRGRTGSGKTYAFLLPLVARLTASGRPAQARKPRA 84
Query: 613 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEISL 768
LVLAPTREL QI++ T+ + VFGG + Q + L RG +I L
Sbjct: 85 LVLAPTRELVNQIEEALKPLARTAGLTTQTVFGGVGQNPQVQGLRRGADIVL 136
>UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 552
Score = 70.5 bits (165), Expect = 5e-11
Identities = 37/92 (40%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINN---QPPIRRGDGPIALVLAPTRELAQQIQQVAA 666
++F +A TGSGKT+A+ +PA++H+ + ++G P LVL+PTRELAQQI V
Sbjct: 130 RDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGV-PRVLVLSPTRELAQQIADVLC 188
Query: 667 DFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
+ G + + C++GG K Q L+ GV+I
Sbjct: 189 EAGAPCGISSVCLYGGTSKGPQISALKSGVDI 220
>UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_36,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 813
Score = 70.5 bits (165), Expect = 5e-11
Identities = 39/83 (46%), Positives = 50/83 (60%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
++ +A+TGSGKTLAY LP I+H QP + GP LVLAPTRELAQQIQ
Sbjct: 470 RDVIAIAETGSGKTLAYALPGIIHSQAQPKVL---GPRILVLAPTRELAQQIQS-----Q 521
Query: 676 HTSYVRNTCVFGGAPKREQARDL 744
+ + R CV+GG K Q ++
Sbjct: 522 YELFTRTCCVYGGVFKNLQYSEI 544
>UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 585
Score = 70.1 bits (164), Expect = 6e-11
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTRELAQQIQQVAA 666
++ +A+TG+GKT AY++P I + P + GP ALVLAPTRELA QIQ+
Sbjct: 214 RDLIALAETGTGKTFAYLIPLIQFVLKLPKLTEETSASGPYALVLAPTRELALQIQKETL 273
Query: 667 DFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
+R C GG P + Q +L G EI
Sbjct: 274 KLATPFGLRVCCCIGGEPMQPQIEELSNGAEI 305
Score = 38.3 bits (85), Expect = 0.22
Identities = 20/60 (33%), Positives = 35/60 (58%)
Frame = +2
Query: 332 RNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
R N + V+ EV P++ +++ N D + +K + Y+ PTPIQ PIA+ ++L+A
Sbjct: 160 RENLNIFVNNNEVIKPLRKWDDMNVCDDLLLLIKNI-YENPTPIQCASIPIALKMRDLIA 218
>UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3;
Piroplasmida|Rep: DEAD-family helicase, putative -
Theileria annulata
Length = 757
Score = 70.1 bits (164), Expect = 6e-11
Identities = 37/87 (42%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRG---DGPIALVLAPTRELAQQIQQVAADFGHT 681
+A TGSGKT A++LP + ++ PP+ DGP AL+LAP+RELA QI F
Sbjct: 382 IAVTGSGKTAAFVLPMLTYVKKLPPLDDETSLDGPYALILAPSRELALQIYDETVKFSAF 441
Query: 682 SYVRNTCVFGGAPKREQARDLERGVEI 762
R+ V GG QA +L +G EI
Sbjct: 442 CSCRSVAVVGGRNAESQAFELRKGCEI 468
Score = 46.8 bits (106), Expect = 6e-04
Identities = 21/60 (35%), Positives = 36/60 (60%)
Frame = +2
Query: 329 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
+R + E+ + G V PI+ + E+ P + + +K GY +PTPIQ Q PIA+ ++L+
Sbjct: 321 FREDFEIYIKGGRVPPPIRTWAESPLPWELLEAIKKAGYIKPTPIQMQAIPIALEMRDLI 380
>UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP3 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 605
Score = 70.1 bits (164), Expect = 6e-11
Identities = 39/93 (41%), Positives = 58/93 (62%), Gaps = 8/93 (8%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIA-----LVLAPTRELAQQI 651
K+ +A+TGSGKTLA+ +P I ++ PP+ ++G G + LVLAPTRELAQQ
Sbjct: 211 KDVVGIAETGSGKTLAFGVPGINLLSQLPPVTGSKKGRGQVPGQIQMLVLAPTRELAQQS 270
Query: 652 QQVAADFGHTSYVRNTCVFGGAPKREQARDLER 750
+ + FG +++ C+FGG K QAR+L +
Sbjct: 271 HEHLSAFGEQVGLKSVCIFGGVGKDGQARELSQ 303
>UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 757
Score = 69.7 bits (163), Expect = 8e-11
Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDG---PIALVLAPTRELAQQIQQVAA 666
++ AQTGSGKT A+ P I I R G P AL+L+PTREL+ QI + A
Sbjct: 158 RDLMACAQTGSGKTAAFCFPIICGILRNQLSRGGARLACPTALILSPTRELSCQIHEEAK 217
Query: 667 DFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
F + + ++ +GGAP +Q R+LERGV+I
Sbjct: 218 KFSYKTGLKVVVAYGGAPISQQFRNLERGVDI 249
Score = 36.7 bits (81), Expect = 0.68
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +2
Query: 317 EVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 496
E+EE + + + + I + + + + Q ++ Y +PTPIQ PIAM+G
Sbjct: 98 ELEEVEDTNGGLSINFDAYEDIPVEAKIHLGEGLNQNIRRCKYVKPTPIQRHAIPIAMAG 157
Query: 497 KNLVA 511
++L+A
Sbjct: 158 RDLMA 162
>UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 604
Score = 69.7 bits (163), Expect = 8e-11
Identities = 39/84 (46%), Positives = 49/84 (58%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+AQTGSGKTLA++LPAIVHI Q R P L+LAPTREL QI F S +
Sbjct: 177 IAQTGSGKTLAFLLPAIVHILAQ---ARSHDPKCLILAPTRELTLQIYDQFQKFSVGSQL 233
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
C++GG + Q L +G +I
Sbjct: 234 YAACLYGGQDRYIQKSQLRKGPQI 257
Score = 52.8 bits (121), Expect = 1e-05
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Frame = +2
Query: 320 VEEYRNNHEVTVSG--VEVHNPIQYFEEAN-FPDYVQQGVKTMGYKEPTPIQAQGWPIAM 490
++EYR H + + V V +PI FE+ FP + + G+K PT IQAQGW IA+
Sbjct: 110 IKEYRAQHNIFIRSQHVTVPDPIMRFEDVQCFPQMLMDLLLKAGFKGPTAIQAQGWSIAL 169
Query: 491 SGKNLV 508
+G +L+
Sbjct: 170 TGHDLI 175
>UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5;
n=4; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 5 - Arabidopsis thaliana (Mouse-ear cress)
Length = 537
Score = 69.7 bits (163), Expect = 8e-11
Identities = 38/88 (43%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHI-NNQPPIRRGD---GPIALVLAPTRELAQQIQQVAADFGH 678
+A+TGSGKTLA+ +PAI+H+ I G P LVL+PTRELA QI V + G
Sbjct: 157 IAKTGSGKTLAFGIPAIMHVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQISDVLREAGE 216
Query: 679 TSYVRNTCVFGGAPKREQARDLERGVEI 762
+++ CV+GG+ K Q + GV+I
Sbjct: 217 PCGLKSICVYGGSSKGPQISAIRSGVDI 244
Score = 39.9 bits (89), Expect = 0.073
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +2
Query: 317 EVEEYRNNHEVTVSGVEV--HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAM 490
E E + VT GVE + ++ F E+N P+ V KT +++P+PIQ+ WP +
Sbjct: 92 EGESEQQKVVVTGKGVEEAKYAALKTFAESNLPENVLDCCKT--FEKPSPIQSHTWPFLL 149
Query: 491 SGKNLV 508
G++L+
Sbjct: 150 DGRDLI 155
>UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1;
Chironomus tentans|Rep: Ded1-like DEAD-box RNA helicase
- Chironomus tentans (Midge)
Length = 776
Score = 69.3 bits (162), Expect = 1e-10
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 10/96 (10%)
Frame = +1
Query: 505 SCVAQTGSGKTLAYILPAIVHI----------NNQPPIRRGDGPIALVLAPTRELAQQIQ 654
SC AQTGSGKT A+++P + + +N+P RR P+ LVLAPTRELA QI
Sbjct: 309 SC-AQTGSGKTAAFLVPILNRMLEQGASMNPASNRPYQRRKQYPLGLVLAPTRELATQIY 367
Query: 655 QVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
+ A F + S +R ++GG EQ R+L+RG +
Sbjct: 368 EEAKKFSYRSRMRPAVLYGGNNTSEQMRELDRGCHL 403
Score = 39.1 bits (87), Expect = 0.13
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +2
Query: 347 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
V +G +V I F++ + ++ +K Y +PTP+Q PI +SG++L++
Sbjct: 255 VEATGQQVPEHITSFDDIKLTEIIRTNIKMARYDKPTPVQKYAIPIILSGRDLMS 309
>UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein;
n=2; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 541
Score = 69.3 bits (162), Expect = 1e-10
Identities = 37/83 (44%), Positives = 49/83 (59%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 693
+QTGSGKT A++LP I + P + L PTRELA QI + F + ++
Sbjct: 165 SQTGSGKTAAFMLPVITQLIGTC---HSPNPSCVALCPTRELAIQIFEETRKFCKGTDLK 221
Query: 694 NTCVFGGAPKREQARDLERGVEI 762
TCVFGGAP EQ R+L RG++I
Sbjct: 222 TTCVFGGAPITEQIRNLSRGIDI 244
>UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa
homlogue - Platynereis dumerilii (Dumeril's clam worm)
Length = 712
Score = 67.7 bits (158), Expect = 3e-10
Identities = 38/95 (40%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDG------PIALVLAPTRELAQQIQQ 657
K+ AQTGSGKT A++LP + I I G G P A+++ PTREL QI
Sbjct: 308 KDLMGCAQTGSGKTAAFLLPVLTGIIKNDLIEGGSGFGGPQYPAAIIVGPTRELVNQIYL 367
Query: 658 VAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
A F ++ VR V+GG QAR+LE+G +
Sbjct: 368 EARKFASSTCVRPVVVYGGTSVGYQARELEKGAHV 402
Score = 41.1 bits (92), Expect = 0.032
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 347 VTVSGVEV-HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
V VSG N I F++A+ + V+ V+ Y PTPIQ PI +SGK+L+
Sbjct: 257 VEVSGTNAPKNGILNFDQADLSETVRSNVRKAKYDRPTPIQKWAIPIVLSGKDLM 311
>UniRef50_UPI0000498E70 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 558
Score = 67.3 bits (157), Expect = 4e-10
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
Frame = +1
Query: 490 VWKEFSCV--AQTGSGKTLAYILPAIVHI-NNQPPIRRGDGPIALVLAPTRELAQQIQQV 660
+ +E C+ AQTGSGKTLAY+LP I I N P ++R DG L+L PTREL QQ+ V
Sbjct: 42 ILQEKDCLVKAQTGSGKTLAYLLPTITMILNKHPKLKRTDGLFCLILTPTRELTQQVYDV 101
Query: 661 AADFGHTSYVR--NTCVFGGAPKREQARDLERGVEI 762
TS + + V GG K+ + + +GV I
Sbjct: 102 LTIL-TTSIIGLVPSIVVGGDSKKSEKARIRKGVNI 136
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 67.3 bits (157), Expect = 4e-10
Identities = 36/89 (40%), Positives = 49/89 (55%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
K+ AQTG+GKTLA++LP I ++ +P R G AL+L PTRELA QI +
Sbjct: 40 KDIVATAQTGTGKTLAFLLPTIQLLSTEP---RQPGVRALILTPTRELALQINEALLQIA 96
Query: 676 HTSYVRNTCVFGGAPKREQARDLERGVEI 762
+ +R GG +R Q RD+ G I
Sbjct: 97 RGTGIRAAVAVGGLNERSQLRDIRGGANI 125
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 67.3 bits (157), Expect = 4e-10
Identities = 35/83 (42%), Positives = 46/83 (55%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 693
AQTG+GKT A+ LP + + P GP LVL PTREL Q++ DFG + VR
Sbjct: 45 AQTGTGKTAAFALPVLARLGGHRP----GGPRVLVLEPTRELGAQVETAFRDFGRFTDVR 100
Query: 694 NTCVFGGAPKREQARDLERGVEI 762
+T + GG +Q DL G +I
Sbjct: 101 STIIHGGVGYGKQRSDLRAGTDI 123
Score = 43.6 bits (98), Expect = 0.006
Identities = 16/41 (39%), Positives = 28/41 (68%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
F + P + +GV+ MGY +PTP+Q + P+ ++G++LVA
Sbjct: 3 FSKLGLPSSLVRGVQAMGYVDPTPVQLRAIPVVLAGRDLVA 43
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 67.3 bits (157), Expect = 4e-10
Identities = 40/109 (36%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Frame = +1
Query: 427 CKDNGLQRTDAYSSSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHI-NNQPPIRRGDG 603
CK+ + S + + + +AQTGSGKT A+ +P + + ++Q P
Sbjct: 96 CKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQEPY----- 150
Query: 604 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER 750
A +LAPTRELAQQI++ G VR+TC+ GG +QARDL R
Sbjct: 151 -YACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMR 198
Score = 34.7 bits (76), Expect = 2.7
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
F E N + Q K + Y +PTPIQ++ P A+ G +++
Sbjct: 83 FSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDII 122
>UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Kineococcus radiotolerans SRS30216|Rep: DEAD/DEAH
box helicase domain protein - Kineococcus radiotolerans
SRS30216
Length = 590
Score = 66.9 bits (156), Expect = 6e-10
Identities = 38/108 (35%), Positives = 53/108 (49%)
Frame = +1
Query: 439 GLQRTDAYSSSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 618
G+ A S L D ++ A+TGSGKTL + LP + + Q R P LV
Sbjct: 165 GMTAPFAIQSRTLPDGIAGRDILGRARTGSGKTLGFGLPMLARLAQQKRPRITGAPRGLV 224
Query: 619 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
L PTRELA Q+ G + +R + V GG P Q L+RG+++
Sbjct: 225 LVPTRELAMQVADALRPLGDSLDLRLSVVVGGVPYGRQIAALQRGIDV 272
>UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. RNA
SFII helicase; n=3; Cryptosporidium|Rep: Nucleolar
protein GU2. eIF4A-1-family. RNA SFII helicase -
Cryptosporidium parvum Iowa II
Length = 738
Score = 66.9 bits (156), Expect = 6e-10
Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Frame = +1
Query: 430 KDNGLQRTDAYSSSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHINNQ---PPIRRGD 600
+ G++R + Y K+ A+TG+GKTLA++LP I + + P + G
Sbjct: 80 RSRGIERLFPIQAQSFESIYGKKDVLGKAKTGTGKTLAFVLPVIERLLKKGKFDPNKHGR 139
Query: 601 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
P+ LVL PTRELAQQ+ + V+GG+P+ Q +++++GV+I
Sbjct: 140 RPLVLVLLPTRELAQQVSNEFELMKGKDRYKVCSVYGGSPEYPQIQEIKKGVDI 193
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 66.9 bits (156), Expect = 6e-10
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAADF 672
++ AQTG+GKT + LP + H+ + P +G P+ AL+L PTRELA QI + D+
Sbjct: 39 RDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDY 98
Query: 673 GHTSYVRNTCVFGGAPKREQARDLERGVEI 762
+R+ VFGG Q L GV++
Sbjct: 99 SKYLNIRSLVVFGGVSINPQMMKLRGGVDV 128
Score = 36.7 bits (81), Expect = 0.68
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 407 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
PD + + V GY+EPTPIQ Q P + G++L+A
Sbjct: 10 PD-ILRAVAEQGYREPTPIQQQAIPAVLEGRDLMA 43
>UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4;
Protostomia|Rep: ATP-dependent RNA helicase bel -
Drosophila melanogaster (Fruit fly)
Length = 798
Score = 66.9 bits (156), Expect = 6e-10
Identities = 39/99 (39%), Positives = 56/99 (56%), Gaps = 10/99 (10%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAI---VHINNQPP-------IRRGDGPIALVLAPTRELAQ 645
++ AQTGSGKT A+++P + + + PP RR P+ LVLAPTRELA
Sbjct: 333 RDLMACAQTGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRELAT 392
Query: 646 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
QI + A F + S +R ++GG EQ R+L+RG +
Sbjct: 393 QIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHL 431
Score = 36.3 bits (80), Expect = 0.90
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +2
Query: 347 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
V +G V I F++ + ++ V Y +PTP+Q PI ++G++L+A
Sbjct: 283 VEATGQNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMA 337
>UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y
chromosome-related; n=3; Apicomplexa|Rep: DEAD box
polypeptide, Y chromosome-related - Cryptosporidium
hominis
Length = 702
Score = 66.5 bits (155), Expect = 7e-10
Identities = 38/99 (38%), Positives = 58/99 (58%), Gaps = 10/99 (10%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVH-INNQPP---------IRRGDGPIALVLAPTRELAQ 645
++ AQTGSGKT A++ P ++ +N+ PP I+R P+ALVL+PTRELA
Sbjct: 239 RDLMACAQTGSGKTAAFLFPIVMKMLNDGPPPTPQQSSLRIKRMAYPVALVLSPTRELAI 298
Query: 646 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
Q + + F + +R ++GG+ R Q DL+RG +I
Sbjct: 299 QTYEESRKFCFGTGIRTNVLYGGSEVRSQIMDLDRGSDI 337
>UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 44; n=1; Arabidopsis thaliana|Rep: Putative
DEAD-box ATP-dependent RNA helicase 44 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 622
Score = 66.5 bits (155), Expect = 7e-10
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIR---RGDGPIALVLAPTRELAQQIQQVAADFGHT 681
++ TGSGKT A++LP + +I+ PP+R + +GP ALV+ PTRELA QI++ F
Sbjct: 253 ISATGSGKTAAFVLPMLAYISRLPPMREENQTEGPYALVMVPTRELAHQIEEETVKFSRY 312
Query: 682 SYVRNTCVFGGAPKREQARDLERGVEI 762
+ + G +QA L +G EI
Sbjct: 313 LGFKAVSITGWESIEKQALKLSQGCEI 339
>UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 738
Score = 66.5 bits (155), Expect = 7e-10
Identities = 37/87 (42%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIR---RGDGPIALVLAPTRELAQQIQQVAADFGHT 681
VA+TGSGKT A+++P + +I + PP+ R GP AL++APTRELAQQI+ F
Sbjct: 358 VAKTGSGKTAAFVIPMLDYIGHLPPLNDDNRHLGPYALIMAPTRELAQQIETETRRFALP 417
Query: 682 SYVRNTCVFGGAPKREQARDLERGVEI 762
+ + GG EQ L G EI
Sbjct: 418 LGYKCVSIVGGRSVEEQQFALRDGAEI 444
Score = 47.2 bits (107), Expect = 5e-04
Identities = 18/60 (30%), Positives = 35/60 (58%)
Frame = +2
Query: 329 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
+R + + G + +P++ + E+ P + ++ +GYKEP+PIQ Q PI M ++L+
Sbjct: 297 FREDFSIAARGGGIPHPLRNWRESAIPSQILDIIEEIGYKEPSPIQRQAIPIGMQNRDLI 356
>UniRef50_Q4SWK6 Cluster: Chromosome 12 SCAF13614, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 12 SCAF13614, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1027
Score = 66.1 bits (154), Expect = 1e-09
Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 5/88 (5%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINN-QPPIRRGDGPIALVLAPTRELAQQ----IQQVAADFGH 678
+QTGSGKTL+Y +P + + QP + RGDGP+AL+L PTRELAQQ Q++ F
Sbjct: 124 SQTGSGKTLSYAIPVVQSLQALQPKVSRGDGPLALILVPTRELAQQTFVTFQKLLKPF-- 181
Query: 679 TSYVRNTCVFGGAPKREQARDLERGVEI 762
++V + GG ++ + L +G+ I
Sbjct: 182 -TWVVPGVLMGGEKRKAEKARLRKGINI 208
>UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Janibacter sp. HTCC2649
Length = 514
Score = 66.1 bits (154), Expect = 1e-09
Identities = 35/99 (35%), Positives = 54/99 (54%)
Frame = +1
Query: 466 SSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQ 645
++ L DS ++ +TGSGKT A++LP + ++ R+ P AL+LAPTRELA
Sbjct: 46 AATLPDSLAGRDVLGRGRTGSGKTYAFLLPMLARLSAGGTRRQAKRPRALILAPTRELAI 105
Query: 646 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
QI + A + + VFGG + Q + RGV++
Sbjct: 106 QIDEALAPLAQPLGITSKTVFGGVGQGPQVNAITRGVDV 144
>UniRef50_Q752X1 Cluster: AFR452Cp; n=1; Eremothecium gossypii|Rep:
AFR452Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 287
Score = 66.1 bits (154), Expect = 1e-09
Identities = 42/95 (44%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIR---RGDGPIALVLAPTRELAQQIQQVAA 666
+++ VA TGSGKTLA++LP + P+ R DGP ALVLAPTRELAQQI+ A
Sbjct: 195 RDYVGVAATGSGKTLAFLLPIFAKLGRMAPLNAVTRQDGPRALVLAPTRELAQQIEAQAR 254
Query: 667 DFGHTSYVRNTC----VFGGAPKREQARDLERGVE 759
F S+ + C + GG E A L+ G E
Sbjct: 255 QF--LSHWQRPCPVASIAGGHSFEEIALSLQGGCE 287
>UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Victivallis vadensis ATCC BAA-548|Rep: DEAD/DEAH
box helicase domain protein - Victivallis vadensis ATCC
BAA-548
Length = 542
Score = 65.7 bits (153), Expect = 1e-09
Identities = 38/84 (45%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELAQQIQQVAADFGHTSYV 690
AQTG+GKT A++L + N P R G P ALVLAPTRELA QIQ+ A + +
Sbjct: 169 AQTGTGKTAAFLLAVFTRLLNHPLEERKPGCPRALVLAPTRELAMQIQKDAEVLEIFTGL 228
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
+ VFGG +Q R LE+ V++
Sbjct: 229 TSVVVFGGMDHEKQRRSLEQPVDL 252
>UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular
organisms|Rep: DEAD/DEAH box helicase - Thiobacillus
denitrificans (strain ATCC 25259)
Length = 533
Score = 65.3 bits (152), Expect = 2e-09
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSYV 690
+ TGSGKT A++LP+I + +P ++ GP LVL PTRELA Q+++ A +G
Sbjct: 45 SHTGSGKTAAFLLPSIQRLLAEPAVK-SIGPRVLVLTPTRELALQVEKAAMTYGKEMRRF 103
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
R C+ GGAP Q + L + V++
Sbjct: 104 RTACLVGGAPYGLQLKRLSQPVDV 127
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 65.3 bits (152), Expect = 2e-09
Identities = 38/91 (41%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Frame = +1
Query: 493 WKEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 672
WK+ A TG+GKT A+ +P + HI+ + D ALVLAPTRELA QIQ D
Sbjct: 49 WKDVIAKAPTGTGKTFAFGIPMVEHIDPE-----SDAVQALVLAPTRELALQIQDELRDL 103
Query: 673 -GHTSYVRNTCVFGGAPKREQARDLERGVEI 762
VR+ C++GGAP +Q L++ +I
Sbjct: 104 CEFKEGVRSVCLYGGAPIEKQITTLKKHPQI 134
>UniRef50_Q240I5 Cluster: DEAD/DEAH box helicase family protein;
n=2; Oligohymenophorea|Rep: DEAD/DEAH box helicase
family protein - Tetrahymena thermophila SB210
Length = 749
Score = 65.3 bits (152), Expect = 2e-09
Identities = 33/92 (35%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRG---DGPIALVLAPTRELAQQIQQVAA 666
K+ ++QTG+GKT A+++P I ++ + PP+ DGP AL+L PTRELA QI++
Sbjct: 361 KDLIGISQTGTGKTCAFLIPLITYLRSLPPMDEEIAKDGPYALILIPTRELAPQIEKEFQ 420
Query: 667 DFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
+ +++ + GG + QA L+ G E+
Sbjct: 421 NLTSNMRMKSLVMVGGKDEGNQAFKLKLGCEL 452
Score = 50.8 bits (116), Expect = 4e-05
Identities = 20/60 (33%), Positives = 36/60 (60%)
Frame = +2
Query: 329 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
+R ++++ + G V P++ +EE P Y+ V+ Y++PTPIQ Q PI + K+L+
Sbjct: 305 FREDNDIIIKGGRVPKPMRTWEEGELPPYILDAVRRSKYEKPTPIQMQTIPIGLQRKDLI 364
>UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 617
Score = 65.3 bits (152), Expect = 2e-09
Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 10/99 (10%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPP----------IRRGDGPIALVLAPTRELAQ 645
++ AQTGSGKT ++ P + P R P ALVLAPTRELA
Sbjct: 192 RDLMACAQTGSGKTGGFLFPLFTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTRELAT 251
Query: 646 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
QI + A F + S+VR V+GGAP Q R+++RG ++
Sbjct: 252 QIFEEARKFTYRSWVRPCVVYGGAPIGNQMREVDRGCDL 290
Score = 39.9 bits (89), Expect = 0.073
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +2
Query: 335 NNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
+N V SG +V PI F + + + +K + +PTP+Q PI G++L+A
Sbjct: 138 DNIPVDASGKDVPEPILDFSSPPLDELLMENIKLASFTKPTPVQKYSIPIVTKGRDLMA 196
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 64.9 bits (151), Expect = 2e-09
Identities = 35/85 (41%), Positives = 48/85 (56%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 693
AQTG+GKT A+ LP + ++ P LVL+PTRELA QI Q +G R
Sbjct: 40 AQTGTGKTAAFALPILNQLDLDRSRADACAPQVLVLSPTRELAVQIAQSFNVYGRNVKFR 99
Query: 694 NTCVFGGAPKREQARDLERGVEISL 768
T +FGG + Q R L+RGV +++
Sbjct: 100 LTTIFGGVGQNPQVRALKRGVHVAI 124
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 64.5 bits (150), Expect = 3e-09
Identities = 33/84 (39%), Positives = 48/84 (57%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+AQTGSGKT A+ LP + I RR AL+LAPTRELA QI+Q + ++++
Sbjct: 130 IAQTGSGKTAAFSLPILQKIIGLGDKRRPKTARALILAPTRELAVQIEQTIRNVSKSAHI 189
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
V GG K Q + + G+++
Sbjct: 190 STALVLGGVSKLSQIKRIAPGIDV 213
>UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2;
Desulfitobacterium hafniense|Rep: DEAD/DEAH box
helicase-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 425
Score = 64.5 bits (150), Expect = 3e-09
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAADFGHTSYV 690
AQTG+GKT A+ +P + + + +G I ALVLAPTRELA QI + +G +
Sbjct: 45 AQTGTGKTAAFAIPILQSLAMGQGLLKGKRQIRALVLAPTRELATQIAESFTAYGVNLPL 104
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
R +FGG + Q R LE+G++I
Sbjct: 105 RTLVIFGGVGQAPQTRKLEKGIDI 128
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 64.5 bits (150), Expect = 3e-09
Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVH---INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHT 681
+AQTG+GKT A+ LP + H + +P R AL+L+PTRELA QI + AD
Sbjct: 47 IAQTGTGKTAAFALPLLHHLMTVGGKPTTRTTK---ALILSPTRELAVQIAESIADLSEG 103
Query: 682 SYVRNTCVFGGAPKREQARDLERGVEI 762
+ + + VFGG R Q + L RGV+I
Sbjct: 104 TPISHCVVFGGVSVRPQIQALARGVDI 130
>UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 411
Score = 64.5 bits (150), Expect = 3e-09
Identities = 33/84 (39%), Positives = 45/84 (53%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+A+TGSGKTLAY LP + + + P GD P+AL+L PTREL QQ+ ++
Sbjct: 83 LAETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQVFMNVSEMLDVIRC 142
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
V GG P Q L G ++
Sbjct: 143 PGNPVCGGVPVSTQTIALREGADV 166
Score = 48.8 bits (111), Expect = 2e-04
Identities = 27/98 (27%), Positives = 47/98 (47%)
Frame = +2
Query: 272 NFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKE 451
++YD + V + S V+E R + + + G + PI+ F + N P + + ++
Sbjct: 3 SYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKNFQV 62
Query: 452 PTPIQAQGWPIAMSGKNLVA*LKRVPAKRWPTSCQPLC 565
PTPIQ Q MSG++++ + K S PLC
Sbjct: 63 PTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSL-PLC 99
>UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;
Cryptosporidium|Rep: U5 snRNP 100 kD protein, putative -
Cryptosporidium parvum Iowa II
Length = 529
Score = 64.5 bits (150), Expect = 3e-09
Identities = 35/91 (38%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVAADFGHT 681
+A+TGSGKT+A+++P I ++ N+P + +GP L+LAP RELA QI+ A +
Sbjct: 185 IAETGSGKTIAFLIPLISYVGNKPILDYKTSQEGPYGLILAPARELALQIEDEAQKLLNK 244
Query: 682 SY----VRNTCVFGGAPKREQARDLERGVEI 762
++ +R + GG +QA L +GVEI
Sbjct: 245 THELKRIRTLSIVGGRNIDQQAFSLRKGVEI 275
Score = 45.2 bits (102), Expect = 0.002
Identities = 17/60 (28%), Positives = 39/60 (65%)
Frame = +2
Query: 329 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
+R ++ + V G +V NPI+ +++ + + + ++ +GY++PTPIQ Q PI + ++++
Sbjct: 124 FREDYSINVRGKDVPNPIRNWKDCHVLEIQTELIRNIGYEKPTPIQMQCIPIGLKLRDMI 183
>UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1238
Score = 64.5 bits (150), Expect = 3e-09
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPP-----IRRGDGPIALVLAPTRELAQQIQQVAADFG 675
+AQTGSGKT+AY+LP ++ I +Q ++ +GP L+L PTRELA QI+ F
Sbjct: 137 IAQTGSGKTIAYLLPGLIQITSQKTEELNNTKKQNGPQMLILVPTRELAMQIESEIQLFT 196
Query: 676 HTSYVRNTCVFGGAPKRE 729
++ C++GG R+
Sbjct: 197 QNYRLKTLCIYGGINNRK 214
>UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 568
Score = 64.5 bits (150), Expect = 3e-09
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVAADFGHT 681
+A+TGSGKT ++++P + +I+ P + + GP AL+L PTRELAQQI+ F
Sbjct: 310 IAETGSGKTASFLIPLLAYISKLPKLDEHTKALGPQALILVPTRELAQQIETETNKFAGR 369
Query: 682 SYVRNTCVFGGAPKREQARDLERGVEI 762
+R + GG +QA L G EI
Sbjct: 370 LGLRCVSIVGGRDMNDQAYALRDGAEI 396
Score = 46.4 bits (105), Expect = 8e-04
Identities = 17/60 (28%), Positives = 35/60 (58%)
Frame = +2
Query: 329 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
+R + ++ G + P++ + E+ P + ++ +GYKEP+PIQ Q PI + ++L+
Sbjct: 249 FREDFGISARGGNIPKPLRSWRESGIPASILSTIEEVGYKEPSPIQRQAIPIGLQNRDLI 308
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 64.1 bits (149), Expect = 4e-09
Identities = 35/84 (41%), Positives = 46/84 (54%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+AQTG+GKT ++ LP + + P +G LVLAPTREL QI F V
Sbjct: 50 LAQTGTGKTASFALPLLHRLAATPRPAPKNGARVLVLAPTRELVSQIADGFESFSRHQPV 109
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
R T +FGG + Q + LE GV+I
Sbjct: 110 RVTTIFGGVSQVHQVKALEEGVDI 133
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 64.1 bits (149), Expect = 4e-09
Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADFGHTSYV 690
A TG+GKT A+ LP + + + R GD GP ALVL PTRELA Q+ + +G
Sbjct: 101 AATGTGKTAAFALPLLHRLTDD---RTGDHGPQALVLVPTRELAVQVSEAIHRYGRDLGA 157
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
R V+GGAP Q R L +GV++
Sbjct: 158 RVLPVYGGAPIGRQVRALVQGVDV 181
>UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 654
Score = 64.1 bits (149), Expect = 4e-09
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 6/89 (6%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPI----RRGDG--PIALVLAPTRELAQQIQQVAADFG 675
A+TG GKTLA++LP + + P+ RR G P+ +VLAPTRELA+Q+ G
Sbjct: 127 ARTGCGKTLAFVLPIVEEMAKISPMPANGRRVQGRRPMCVVLAPTRELAKQVFADFDWIG 186
Query: 676 HTSYVRNTCVFGGAPKREQARDLERGVEI 762
++ ++ CV+GG P REQ L G ++
Sbjct: 187 NSFGFKSVCVYGGTPYREQEMGLRGGCDV 215
>UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVLGA
- Dugesia japonica (Planarian)
Length = 726
Score = 64.1 bits (149), Expect = 4e-09
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIR-------RGDGPIALVLAPTRELAQQIQ 654
++ AQTGSGKT A+++P + + P + + P+AL+LAPTRELA QI
Sbjct: 249 RDLMACAQTGSGKTAAFLIPLLSMMYQDGPGNSLSHSGYKKEYPVALILAPTRELAVQIY 308
Query: 655 QVAADFGHTSYVRNTCVFGGAPKREQARDLERG 753
A F + S VR V+GG R Q +D+ +G
Sbjct: 309 DEARKFSYRSLVRPCVVYGGRDIRGQLQDISQG 341
>UniRef50_P23394 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=3; Saccharomycetaceae|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 588
Score = 64.1 bits (149), Expect = 4e-09
Identities = 30/59 (50%), Positives = 44/59 (74%), Gaps = 4/59 (6%)
Frame = +1
Query: 493 WKEFSCVAQTGSGKTLAYILPAIVHINNQPP----IRRGDGPIALVLAPTRELAQQIQQ 657
+++F VA TGSGKTLA+++P ++ ++ PP ++ DGP AL+LAPTREL QQIQ+
Sbjct: 214 YRDFLGVASTGSGKTLAFVIPILIKMSRSPPRPPSLKIIDGPKALILAPTRELVQQIQK 272
>UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 21a; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a -
Strongylocentrotus purpuratus
Length = 657
Score = 63.7 bits (148), Expect = 5e-09
Identities = 34/83 (40%), Positives = 51/83 (61%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 693
A+TG+GKTL+++LP +V Q P + G PI L LAPTRELA+QI + G ++
Sbjct: 146 ARTGTGKTLSFVLP-LVEKWQQFPQKSGRQPIILALAPTRELAKQISEYFEAIG--PHLS 202
Query: 694 NTCVFGGAPKREQARDLERGVEI 762
TC++GG Q + RG+++
Sbjct: 203 TTCIYGGTSYWPQESAIRRGLDV 225
>UniRef50_UPI00006CB2CD Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 767
Score = 63.7 bits (148), Expect = 5e-09
Identities = 39/88 (44%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAI---VHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 684
++TGSGKTL Y++P I VH+ I R DG V+ PTREL Q ++VA S
Sbjct: 253 SETGSGKTLTYLVPIISNLVHMGTDQKITREDGSYVFVICPTRELCIQCEEVAQLVTKKS 312
Query: 685 -YVRNTCVFGGA-PKREQARDLERGVEI 762
Y+ C+ GG PK+E+AR L +GV I
Sbjct: 313 KYLITGCLMGGENPKKEKAR-LRKGVTI 339
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 63.7 bits (148), Expect = 5e-09
Identities = 35/89 (39%), Positives = 48/89 (53%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
K+ AQTG+GKT A+ LP I + + +R P AL+L PTRELAQQ+ +
Sbjct: 45 KDLLAAAQTGTGKTAAFGLPIIQAVQQK---KRNGTPHALILVPTRELAQQVFDNLTQYA 101
Query: 676 HTSYVRNTCVFGGAPKREQARDLERGVEI 762
+ +R CV+GG Q LE G +I
Sbjct: 102 EHTDLRIVCVYGGTSIGVQKNKLEEGADI 130
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 63.7 bits (148), Expect = 5e-09
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAADFGHTSYV 690
AQTG+GKT ++ LP I ++ P G P+ ALVLAPTRELA Q+ ++G +
Sbjct: 48 AQTGTGKTASFALPIIEKLSKNPI--DGYRPVRALVLAPTRELAIQVADNTLEYGRDLGM 105
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
R V+GG P Q + L+RG +I
Sbjct: 106 RVISVYGGVPVENQIKRLKRGTDI 129
Score = 37.1 bits (82), Expect = 0.51
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
F E +Q +K +GY++PTPIQ+Q P+ + G +L+A
Sbjct: 6 FAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLA 46
>UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-dependent RNA helicase -
Sulfurovum sp. (strain NBC37-1)
Length = 447
Score = 63.7 bits (148), Expect = 5e-09
Identities = 33/83 (39%), Positives = 50/83 (60%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 693
AQTGSGKTLAY+LPA+ IN + P +L+PT+ELAQQI +V+ F + +
Sbjct: 45 AQTGSGKTLAYLLPALQQINPEAEKVTHHYPRLFILSPTKELAQQIYEVSRPFVNALDLN 104
Query: 694 NTCVFGGAPKREQARDLERGVEI 762
+ GG + + L++GV++
Sbjct: 105 VVLLQGGGRRTVETERLKKGVDV 127
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 63.7 bits (148), Expect = 5e-09
Identities = 35/87 (40%), Positives = 55/87 (63%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+AQTG+GKT A++LP + + P RG A+++ PTRELA+QIQ V G + +
Sbjct: 44 IAQTGTGKTAAFVLPILQRLMRGP---RGRVR-AMIVTPTRELAEQIQGVIEALGKYTGL 99
Query: 691 RNTCVFGGAPKREQARDLERGVEISLL 771
R+ ++GG + Q + L RGVEI+++
Sbjct: 100 RSVTLYGGVGYQGQIQRLRRGVEIAVV 126
Score = 36.7 bits (81), Expect = 0.68
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
F+ F + G++ +GY PTPIQ Q P A+ G++++
Sbjct: 3 FDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVI 42
>UniRef50_A2D755 Cluster: DEAD/DEAH box helicase family protein; n=1;
Trichomonas vaginalis G3|Rep: DEAD/DEAH box helicase
family protein - Trichomonas vaginalis G3
Length = 1123
Score = 63.7 bits (148), Expect = 5e-09
Identities = 32/89 (35%), Positives = 53/89 (59%)
Frame = +1
Query: 484 SYVWKEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 663
+Y ++ +A+TGSGKT +YI+PAI H+ Q +GP L++APT+ELAQQI+ A
Sbjct: 776 AYAGRDLIGIAKTGSGKTASYIIPAIKHVMLQ---NGREGPHVLIIAPTKELAQQIEIKA 832
Query: 664 ADFGHTSYVRNTCVFGGAPKREQARDLER 750
S ++ ++ +REQ +++
Sbjct: 833 NQLLENSPIKAVAIYASPNRREQINAVKK 861
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 63.7 bits (148), Expect = 5e-09
Identities = 36/87 (41%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHI-NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
A+TG+GKTLA+ +P I I RG P+ LVLAPTRELA+Q+++ +F ++
Sbjct: 148 ARTGTGKTLAFGIPIIDKIIKYNAKHGRGRNPLCLVLAPTRELARQVEK---EFRESAPS 204
Query: 691 RNT-CVFGGAPKREQARDLERGVEISL 768
+T C++GG P +Q R L+ GV++++
Sbjct: 205 LDTICLYGGTPIGQQMRQLDYGVDVAV 231
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 63.3 bits (147), Expect = 7e-09
Identities = 39/108 (36%), Positives = 53/108 (49%)
Frame = +1
Query: 439 GLQRTDAYSSSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 618
G + + + + K+ A TG+GKT A++LP I + +P R ALV
Sbjct: 23 GFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLPLIDRLAGKPGTR------ALV 76
Query: 619 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
LAPTRELA QI + FGH VR + GG +QA L + EI
Sbjct: 77 LAPTRELALQIGEELERFGHARRVRGAVIIGGVGMAQQAEALRQKREI 124
Score = 34.3 bits (75), Expect = 3.6
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
F E + ++ G++ PTPIQAQ P A++GK+++
Sbjct: 6 FAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVI 45
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 63.3 bits (147), Expect = 7e-09
Identities = 39/86 (45%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHI--NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 684
+AQTG+GKT A++LP + I N P R ALVLAPTRELA QI A +G +
Sbjct: 100 IAQTGTGKTAAFVLPILHRIAANRARPAPRACR--ALVLAPTRELATQIADAARTYGKFT 157
Query: 685 YVRNTCVFGGAPKREQARDLERGVEI 762
V GGA QAR +E GV++
Sbjct: 158 RPSVAVVIGGAKPGPQARRMESGVDL 183
>UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=2;
Polaribacter|Rep: Putative ATP-dependent RNA helicase -
Polaribacter dokdonensis MED152
Length = 411
Score = 63.3 bits (147), Expect = 7e-09
Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAADF 672
K AQTG+GKT A+ LP I + ++ +G+ I ALV+ PTRELA QI + +
Sbjct: 39 KNVIVAAQTGTGKTAAFALPIINLLFDKQDAEKGEKKIKALVITPTRELAIQILENFKSY 98
Query: 673 GHTSYVRNTCVFGGAPKREQARDLERGVEI 762
S +R+T VFGG Q L +GV+I
Sbjct: 99 SKYSNLRSTAVFGGVSLEPQKEILAKGVDI 128
>UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Dugesia
japonica (Planarian)
Length = 781
Score = 63.3 bits (147), Expect = 7e-09
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHIN----NQPPIRRGDGPIALVLAPTRELAQQIQQVA 663
++ AQTGSGKT A+++P I H+ NQ + P L+LAPTRELA QI +
Sbjct: 222 RDIMACAQTGSGKTAAFLIPIINHLVCQDLNQQRYSKTAYPKCLILAPTRELAIQILSES 281
Query: 664 ADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
F + +R+ V+GGA Q R+++ G +
Sbjct: 282 QKFSLNTPLRSCVVYGGADTHSQIREVQMGCHL 314
>UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Yarrowia lipolytica (Candida lipolytica)
Length = 575
Score = 63.3 bits (147), Expect = 7e-09
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVAADFGHT 681
VA+TGSGKT ++++P I +I P + + +GP L+LAPTRELA QI+ A F
Sbjct: 206 VAETGSGKTASFLIPLISYICELPKLDERSKVNGPYGLILAPTRELAMQIKDEAVKFCAP 265
Query: 682 SYVRNTCVFGGAPKREQARDLERGVEI 762
+ V GG +EQA ++ G E+
Sbjct: 266 LGFKVVSVVGGYSAQEQALAVQEGAEL 292
Score = 44.8 bits (101), Expect = 0.003
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +2
Query: 347 VTVSGVEVHNPIQYFEEAN-FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
VT G + NP++ + E P V+ + MGYKEPTPIQ PIA+ ++++
Sbjct: 150 VTKGGGNIPNPLRSWNECKEIPGIVRDTISRMGYKEPTPIQRAAIPIALGIRDVI 204
>UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Magnaporthe grisea|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 674
Score = 63.3 bits (147), Expect = 7e-09
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIR---RGDGPIALVLAPTRELAQQIQQVAADFGHT 681
+++TGSGKT A++LP + +I PP+ + +GP AL+LAPTRELA QIQ F
Sbjct: 300 ISKTGSGKTAAFVLPMLSYIEPLPPLNEVTKTEGPYALILAPTRELATQIQAEVIKFATR 359
Query: 682 SYVRNTCVFGGAPK-REQARDLERGVEI 762
C+ G E A L G EI
Sbjct: 360 MGFTVVCLIGNKRTIEEDAFALRNGAEI 387
Score = 56.0 bits (129), Expect = 1e-06
Identities = 21/60 (35%), Positives = 39/60 (65%)
Frame = +2
Query: 329 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
++ N E+ G + NP++++EE+N P ++ +K +GY EPTP+Q PIA+ ++L+
Sbjct: 239 FKVNLEIVTKGNNIPNPMRFWEESNLPHVLKDTIKQVGYTEPTPVQRAAIPIALQCRDLI 298
>UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,
isoform c; n=4; Caenorhabditis|Rep: Vasa-and belle-like
helicase protein 1, isoform c - Caenorhabditis elegans
Length = 660
Score = 62.9 bits (146), Expect = 9e-09
Identities = 43/97 (44%), Positives = 54/97 (55%), Gaps = 11/97 (11%)
Frame = +1
Query: 505 SCVAQTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQ 654
SC AQTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI
Sbjct: 181 SC-AQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIH 239
Query: 655 QVAADFGHTSYVRNTCVFGGAPK-REQARDLERGVEI 762
+ A F + S ++ ++GG R+Q L G I
Sbjct: 240 KEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHI 276
Score = 44.8 bits (101), Expect = 0.003
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +2
Query: 338 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L++
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMS 181
>UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 865
Score = 62.9 bits (146), Expect = 9e-09
Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+AQTGSGKT AY++PAI ++ NQ R GP L++A TREL +QIQ+ + V
Sbjct: 529 IAQTGSGKTAAYLIPAITYVINQNKKR---GPHVLIMANTRELVKQIQEFGEILTKNTSV 585
Query: 691 RNTCVFGGA-PKREQARDL 744
+ +GG +R+Q RD+
Sbjct: 586 KVAVAYGGENNRRQQIRDI 604
Score = 42.3 bits (95), Expect = 0.014
Identities = 23/67 (34%), Positives = 33/67 (49%)
Frame = +2
Query: 308 SPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIA 487
S E E+++ + + G H Q+ + P+ Q V+ + EPTPIQ PI
Sbjct: 462 SDQEFEDFKIRENIKIIGDCPHRLFQFNPQMMLPELFQN-VREQNWTEPTPIQKIAIPIV 520
Query: 488 MSGKNLV 508
MSG NLV
Sbjct: 521 MSGMNLV 527
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 62.5 bits (145), Expect = 1e-08
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH-TSY 687
+AQTG+GKT A+ LP + +I+ + +R P ALVL PTRELAQQ+ + +G
Sbjct: 52 LAQTGTGKTAAFALPILANIDVK--VR---SPQALVLCPTRELAQQVAEAFRSYGRGMGG 106
Query: 688 VRNTCVFGGAPKREQARDLERGVEI 762
+R +FGGA R+Q + L G I
Sbjct: 107 LRILSIFGGADMRQQLKSLREGTHI 131
Score = 39.5 bits (88), Expect = 0.096
Identities = 14/40 (35%), Positives = 27/40 (67%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
F PD++Q+ ++++GY+ TPIQA P+ + G+++V
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVV 50
>UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Xylella fastidiosa
Length = 543
Score = 62.5 bits (145), Expect = 1e-08
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPI--RRGDGPIALVLAPTRELAQQIQQVAADFGHTSY 687
AQTG+GKTLA+++ + + ++P + R + P AL+LAPTRELA QI A FG
Sbjct: 53 AQTGTGKTLAFLVVVVNRLLSRPGLVNRNPEDPRALILAPTRELAIQIYNDAVKFGGNLG 112
Query: 688 VRNTCVFGGAPKREQARDLERGVEI 762
+R ++GG +Q L +G ++
Sbjct: 113 LRFALIYGGVDYDKQREMLRKGADV 137
>UniRef50_UPI0000E47F75 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 59; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 -
Strongylocentrotus purpuratus
Length = 474
Score = 62.1 bits (144), Expect = 2e-08
Identities = 25/77 (32%), Positives = 46/77 (59%)
Frame = +2
Query: 278 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 457
Y HP + + +P +V++ RN ++ V G+ + PI FE+ P + +++ GY PT
Sbjct: 326 YREHPDISQLAPEQVQDIRNEVQIFVEGINIQRPILEFEQLRLPAKIHSNLQSSGYITPT 385
Query: 458 PIQAQGWPIAMSGKNLV 508
PIQ Q PI+++ ++L+
Sbjct: 386 PIQMQAIPISLALRDLM 402
Score = 49.2 bits (112), Expect = 1e-04
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +1
Query: 484 SYVWKEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQV 660
S ++ AQT SGKTL++++PA++ I NQ G P L+ PTRELA QI++
Sbjct: 395 SLALRDLMICAQTSSGKTLSFLVPAVMTIYNQVLTGVGSKDPHVLIFTPTRELAMQIEEQ 454
Query: 661 A 663
A
Sbjct: 455 A 455
>UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Deinococcus|Rep: DEAD/DEAH box helicase-like protein -
Deinococcus geothermalis (strain DSM 11300)
Length = 591
Score = 62.1 bits (144), Expect = 2e-08
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Frame = +1
Query: 418 ATRCKDNGLQRTDAYSSSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHI---NNQPPI 588
A R + G+ + L + K+ A+TG+GKTLA+ LP I ++ + +
Sbjct: 12 AARLAERGITEASPIQAESLPHTLAGKDLIGRARTGTGKTLAFALPIIQNLTAPDGRGSR 71
Query: 589 RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
RG P A+V+APTRELA+Q+ + + G + V+GGA Q L RGV++
Sbjct: 72 ERGRLPRAIVIAPTRELAKQVAEEFSKSG--PQLSTVTVYGGAAYGPQENALRRGVDV 127
>UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus
vannamei|Rep: Vasa-like protein - Penaeus vannamei
(Penoeid shrimp) (European white shrimp)
Length = 703
Score = 62.1 bits (144), Expect = 2e-08
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHI--NNQPP--IRRGDGPIALVLAPTRELAQQIQQVA 663
++ AQTGSGKT A++LP + +I NN P P LV+ PTRELA QI + A
Sbjct: 299 RDIMACAQTGSGKTAAFLLPMLHYILDNNCPSNAFEEPAQPTGLVICPTRELAIQIMREA 358
Query: 664 ADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
F H+S + +GGA Q + + G I
Sbjct: 359 RKFSHSSVAKCCVAYGGAAGFHQLKTIHSGCHI 391
Score = 33.5 bits (73), Expect = 6.3
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 338 NHEVTVSGVEVHNPI-QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
N VSG E P + F+ N + + + GY PTP+Q P M+G++++A
Sbjct: 245 NVPANVSGAEPIQPAAESFQSMNLRPLLLENIVKAGYGCPTPVQKYTIPNVMNGRDIMA 303
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 62.1 bits (144), Expect = 2e-08
Identities = 36/85 (42%), Positives = 48/85 (56%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
K+ +A+TGSGKT A+ +P + Q ALVLAPTRELA QI++ G
Sbjct: 136 KDIVGIAETGSGKTAAFAIPIL-----QTLYTAAQPYYALVLAPTRELAFQIKETFDALG 190
Query: 676 HTSYVRNTCVFGGAPKREQARDLER 750
+ +R+ C+ GG EQARDL R
Sbjct: 191 SSMGLRSVCIIGGMSMMEQARDLMR 215
Score = 36.3 bits (80), Expect = 0.90
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +2
Query: 380 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
+Q F E + + + ++++ Y +PTPIQA P A+ GK++V
Sbjct: 97 VQSFTEFDLVPELLESIQSLKYTQPTPIQAAAIPHALQGKDIV 139
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 61.7 bits (143), Expect = 2e-08
Identities = 33/89 (37%), Positives = 48/89 (53%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
K+ AQTG+GKT + LP + ++ + G ALVL PTRELA Q+ + +G
Sbjct: 39 KDVMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQIR-ALVLTPTRELAAQVSESVETYG 97
Query: 676 HTSYVRNTCVFGGAPKREQARDLERGVEI 762
+R+ VFGG P Q + L GV++
Sbjct: 98 KYLPLRSAVVFGGVPINPQIQKLRHGVDV 126
Score = 35.9 bits (79), Expect = 1.2
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 416 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
+Q+ V GY P+PIQAQ P ++GK+++A
Sbjct: 12 IQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMA 43
>UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3;
Actinobacteria (class)|Rep: ATP-dependent RNA helicase -
marine actinobacterium PHSC20C1
Length = 757
Score = 61.7 bits (143), Expect = 2e-08
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Frame = +1
Query: 466 SSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHI--NNQPPIRR-GDGPIALVLAPTRE 636
++ + D K+ +TGSGKT+A+ P + + NN R+ G P AL+LAPTRE
Sbjct: 400 AATIPDVLAGKDVLGRGKTGSGKTIAFGAPLVERLMENNGGKDRQMGRKPRALILAPTRE 459
Query: 637 LAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
LAQQI + + + T + GG P+ +Q L RGV++
Sbjct: 460 LAQQIDRTIQPIARSVGLFTTTIVGGVPQYKQVAALTRGVDV 501
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 61.7 bits (143), Expect = 2e-08
Identities = 33/89 (37%), Positives = 48/89 (53%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
K+ AQTG+GKT + LP + ++ + G ALVL PTRELA Q+ + +G
Sbjct: 39 KDVMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQIR-ALVLTPTRELAAQVSESVETYG 97
Query: 676 HTSYVRNTCVFGGAPKREQARDLERGVEI 762
+R+ VFGG P Q + L GV++
Sbjct: 98 KYLPLRSAVVFGGVPINPQIQKLRHGVDV 126
Score = 35.9 bits (79), Expect = 1.2
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 416 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
+Q+ V GY P+PIQAQ P ++GK+++A
Sbjct: 12 IQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMA 43
>UniRef50_P36120 Cluster: ATP-dependent RNA helicase DBP7; n=5;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP7 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 742
Score = 61.7 bits (143), Expect = 2e-08
Identities = 37/87 (42%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Frame = +1
Query: 499 EFSCVAQTGSGKTLAYILPAIVHINNQPP-IRRGDGPIALVLAPTRELAQQIQQVAADFG 675
+F AQTGSGKTL+Y+LP I I N + R G ALV+APTRELA QI V +
Sbjct: 186 DFFIHAQTGSGKTLSYLLPIISTILNMDTHVDRTSGAFALVIAPTRELASQIYHVCSTLV 245
Query: 676 HTSYVRNTC-VFGGAPKREQARDLERG 753
+ C + GG K+ + L +G
Sbjct: 246 SCCHYLVPCLLIGGERKKSEKARLRKG 272
>UniRef50_UPI0000F1E5FF Cluster: PREDICTED: similar to Pl10,
partial; n=1; Danio rerio|Rep: PREDICTED: similar to
Pl10, partial - Danio rerio
Length = 245
Score = 61.3 bits (142), Expect = 3e-08
Identities = 32/58 (55%), Positives = 38/58 (65%)
Frame = +1
Query: 589 RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
RR PI+LVLAPTRELA QI A F + S+VR V+GGA +Q RDLERG +
Sbjct: 166 RRKQYPISLVLAPTRELALQIYDEARKFSYRSHVRPCVVYGGADIGQQIRDLERGCHL 223
>UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 393
Score = 61.3 bits (142), Expect = 3e-08
Identities = 31/83 (37%), Positives = 45/83 (54%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 693
+QTGSGKT A++LP + + P GP AL+L PTRELA Q V G ++
Sbjct: 64 SQTGSGKTAAFVLPMLQKLTEAGP---APGPRALILEPTRELAAQTAAVCRQLGRRLSLK 120
Query: 694 NTCVFGGAPKREQARDLERGVEI 762
+ GG + +Q + + GV+I
Sbjct: 121 TRVICGGTSREQQVQSVSDGVDI 143
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 61.3 bits (142), Expect = 3e-08
Identities = 36/89 (40%), Positives = 51/89 (57%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
K+ AQTG+GKT A+ILP I + + +R +LVL PTRELA Q++ A +
Sbjct: 62 KDIMASAQTGTGKTAAFILPIIELLRAEDKPKRYQVH-SLVLTPTRELAAQVEASAKAYT 120
Query: 676 HTSYVRNTCVFGGAPKREQARDLERGVEI 762
+R+ VFGG R Q + L+ GV+I
Sbjct: 121 KYLALRSDAVFGGVSIRPQVKRLQGGVDI 149
Score = 33.1 bits (72), Expect = 8.4
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 338 NHEVTVSGVEV-HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
+H +S ++ +N FE+ + +K GY PTPIQA P + GK+++A
Sbjct: 8 DHSPIISNLKNDNNNTLTFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKDIMA 66
>UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: DEAD/DEAH box
helicase-like protein - Lentisphaera araneosa HTCC2155
Length = 412
Score = 61.3 bits (142), Expect = 3e-08
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
K+ +QTG+GKTLA+ P I IN PP ++ + LVL PTRELA Q+++ ++
Sbjct: 39 KDLLAESQTGTGKTLAFSFPLIERINTLPPKKKKISILGLVLVPTRELALQVEKAFTNYA 98
Query: 676 HTSY--VRNTCVFGGAPKREQARDLERGVEI 762
S ++ + GG Q R L G+++
Sbjct: 99 EFSLRPIKTATLIGGENIDGQIRKLRMGLDV 129
Score = 45.2 bits (102), Expect = 0.002
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
FE+ NFPDY+ + V + + E T IQA+ P+ GK+L+A
Sbjct: 3 FEQLNFPDYLSRAVDNLNFSEATDIQAKAIPLIQEGKDLLA 43
>UniRef50_Q86B47 Cluster: CG8611-PB, isoform B; n=2; Drosophila
melanogaster|Rep: CG8611-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 975
Score = 61.3 bits (142), Expect = 3e-08
Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPP-IRRGDGPIALVLAPTRELAQQIQQVAADF--GHTS 684
+QTGSGKTLAY LP + + Q P I+R DG +ALV+ PTREL Q ++ +T
Sbjct: 372 SQTGSGKTLAYALPLVELLQKQQPRIQRKDGVLALVIVPTRELVMQTYELIQKLVKPYTW 431
Query: 685 YVRNTCVFGGAPKREQARDLERGVEI 762
V + + G + K E+AR L +G+ I
Sbjct: 432 IVPGSLLGGESRKSEKAR-LRKGINI 456
>UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 -
Leishmania major
Length = 544
Score = 61.3 bits (142), Expect = 3e-08
Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELAQQIQQVAADFGHTSY 687
+A TGSGKT+A+ +PA+ + P DG P LVLAPTREL QQ +V + G
Sbjct: 136 LAPTGSGKTVAFAVPALAGLKPNP-----DGTPSVLVLAPTRELVQQTTKVFQNLG-CGQ 189
Query: 688 VRNTCVFGGAPKREQARDLERGVE 759
VR +GGAP+ QAR L G +
Sbjct: 190 VRVCEAYGGAPRDLQARHLRNGCD 213
>UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_85,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 957
Score = 61.3 bits (142), Expect = 3e-08
Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 17/101 (16%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI-----QQVAADFG 675
+AQTGSGKTLAY+LPA+VH+ I P L+L PTREL QI Q + +G
Sbjct: 102 IAQTGSGKTLAYLLPALVHLEQHAMIMESPQPKLLILVPTRELGVQIYDQLLQLIEFYYG 161
Query: 676 HTSY-----------VRNTCVFGGAP-KREQARDLERGVEI 762
+ ++ C++GG P K++Q +++G+ +
Sbjct: 162 NKKQNEKENSPNLTNLKIVCIYGGNPNKKQQVELIQKGIHV 202
Score = 33.1 bits (72), Expect = 8.4
Identities = 25/86 (29%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Frame = +2
Query: 263 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTV--SGVEVHNPIQYFEE-ANFPDYVQQGVK 433
F K F D + L+ S ++E++R ++ +T+ G + ++ IQ F + +FP +
Sbjct: 24 FTKCFIDA--SNLQYSQEDIEKFRTDNNITIVRDGEQDNDIIQPFLDWKHFP------LG 75
Query: 434 TMGYKEPTPIQAQGWPIAMSGKNLVA 511
+++PT IQ++ PI +SG+N +A
Sbjct: 76 PPEFQQPTAIQSEVIPIVLSGRNALA 101
>UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51;
Euteleostomi|Rep: Nucleolar RNA helicase 2 - Homo
sapiens (Human)
Length = 783
Score = 61.3 bits (142), Expect = 3e-08
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Frame = +1
Query: 487 YVWKEFSCVAQTGSGKTLAYILPAIVHINNQPPIR-RGDGPIALVLAPTRELAQQIQQVA 663
Y K+ A+TG+GKT ++ +P I ++ + R RG P LVLAPTRELA Q+ +
Sbjct: 221 YSGKDLIAQARTGTGKTFSFAIPLIEKLHGELQDRKRGRAPQVLVLAPTRELANQVSKDF 280
Query: 664 ADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
+D T + C +GG P Q + G++I
Sbjct: 281 SDI--TKKLSVACFYGGTPYGGQFERMRNGIDI 311
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 60.9 bits (141), Expect = 4e-08
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAADFGHTSYV 690
AQTG+GKT A+ P + + P R PI +L+L PTRELA QIQ+ +G +
Sbjct: 45 AQTGTGKTCAFAAPILQRLGGDIPAGR---PIRSLILTPTRELALQIQESFEAYGKHLPL 101
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
R+ +FGG ++ Q L++GV+I
Sbjct: 102 RSAVIFGGVGQQPQVDKLKKGVDI 125
>UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1;
Ostreococcus tauri|Rep: Putative RNA helicase, DRH1 -
Ostreococcus tauri
Length = 1118
Score = 60.9 bits (141), Expect = 4e-08
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 13/102 (12%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHI-----NNQPPIRRGDG--------PIALVLAPTRE 636
K+ +A+TGSGKT ++LPA+ I P ++ DG P +VLAPTRE
Sbjct: 124 KDVVAIAKTGSGKTCGFLLPALAKIVAEGTQKAPEMQLVDGRWRPGAVTPSVIVLAPTRE 183
Query: 637 LAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
LA QI A F + R+ ++GGA K +Q R L G ++
Sbjct: 184 LAIQIHDECAKFCPAAGCRSAVLYGGAAKGDQLRALRSGADV 225
Score = 59.3 bits (137), Expect = 1e-07
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Frame = +2
Query: 284 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHN----PIQYFEEANFPDYVQQGVKTMGYKE 451
P PT LKR + E++R H++++ P F++A FP +++ +K GY
Sbjct: 51 PTPT-LKRVASK-EDFRKEHQISIKNACERTRDLEPYVTFDDAKFPAALRKALKAQGYDA 108
Query: 452 PTPIQAQGWPIAMSGKNLVA 511
PTPIQA+ WPI + GK++VA
Sbjct: 109 PTPIQAEAWPILLKGKDVVA 128
>UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putative;
n=2; Theileria|Rep: DEAD-box family (RNA) helicase,
putative - Theileria annulata
Length = 797
Score = 60.9 bits (141), Expect = 4e-08
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 10/99 (10%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVH-INNQPPIRRGDGP---------IALVLAPTRELAQ 645
++ AQTGSGKT A++LP + + PP + GP + LVL+PTRELA
Sbjct: 284 RDLMACAQTGSGKTAAFLLPIVTSMLRTGPPKQPSLGPLYNSRVALPVCLVLSPTRELAV 343
Query: 646 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
Q + F + +R ++GG+ R Q +LERG +I
Sbjct: 344 QTYTESRKFNFGTGIRTVVLYGGSEVRRQLIELERGCDI 382
>UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=6;
Trypanosomatidae|Rep: Nucleolar RNA helicase II,
putative - Leishmania major
Length = 674
Score = 60.9 bits (141), Expect = 4e-08
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPP-IRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
A+TGSGKTLA+ +P + + P + RG GP A++ PTRELA Q+Q V G + +
Sbjct: 130 ARTGSGKTLAFGIPIVERLLKLPSHLTRGRGPAAVIFCPTRELAIQVQDVLC--GISCGL 187
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
T ++GG Q R L GV+I
Sbjct: 188 VVTALYGGVAYANQERVLRSGVDI 211
>UniRef50_A2E5C2 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 596
Score = 60.9 bits (141), Expect = 4e-08
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF-G 675
A TGSGKTLAY+LP + + + PIRR G +A+V+APTREL QI+ V D
Sbjct: 77 ADTGSGKTLAYLLPIMHRLATDFPRDTNPIRRDMGCLAIVIAPTRELCLQIETVVQDLRS 136
Query: 676 HTSYVRNTCVFGGAPKREQARDLERGVEI 762
++V + + GG + + + L +G+ +
Sbjct: 137 QMNFVISGSLLGGEKVQSEKKRLRKGINL 165
>UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 605
Score = 60.9 bits (141), Expect = 4e-08
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 9/93 (9%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINN---QP-PIRRGDGPIALVLAPTRELAQQIQQ-----VA 663
+A TGSGKTLA+++P ++ + +P ++ +GP AL+LAPTRELAQQIQ ++
Sbjct: 232 IASTGSGKTLAFVIPILIKLLGTAIRPLSLKVIEGPKALILAPTRELAQQIQAEIKKILS 291
Query: 664 ADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
+ + + C+ GG E + DL +G +I
Sbjct: 292 LSSNELTKITSICIVGGHSIEEISYDLSKGCDI 324
>UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=4; Tetrapoda|Rep: Probable ATP-dependent RNA helicase
DDX59 - Rattus norvegicus (Rat)
Length = 589
Score = 60.9 bits (141), Expect = 4e-08
Identities = 27/78 (34%), Positives = 44/78 (56%)
Frame = +2
Query: 278 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 457
Y HP ++ ++E + ++V G EV PI FE FP+ + Q +K GY+ PT
Sbjct: 168 YKEHPFIVALRDDQIETLKQQLGISVQGQEVARPIIDFEHCGFPETLNQNLKKSGYEVPT 227
Query: 458 PIQAQGWPIAMSGKNLVA 511
PIQ Q P+ + G++++A
Sbjct: 228 PIQMQMIPVGLLGRDILA 245
Score = 49.2 bits (112), Expect = 1e-04
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH-TSYV 690
A TGSGKT A++LP I+ + P AL+L PTRELA QI++ A + +
Sbjct: 247 ADTGSGKTAAFLLPVIIRA-----LPEDKTPSALILTPTRELAIQIERQAKELMRGLPRM 301
Query: 691 RNTCVFGGAPKREQARDLERGVEISLLLQV 780
+ + GG P Q L++ V+ +L++
Sbjct: 302 KTVLLVGGLPLPPQLYRLQQHVKADTMLKM 331
>UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=34; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX59 - Homo sapiens (Human)
Length = 619
Score = 60.9 bits (141), Expect = 4e-08
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +2
Query: 260 PFNKNF-YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 436
P N ++ Y HP +L ++E + + V G EV PI FE + P+ + +K
Sbjct: 161 PLNASYVYKEHPFILNLQEDQIENLKQQLGILVQGQEVTRPIIDFEHCSLPEVLNHNLKK 220
Query: 437 MGYKEPTPIQAQGWPIAMSGKNLVA 511
GY+ PTPIQ Q P+ + G++++A
Sbjct: 221 SGYEVPTPIQMQMIPVGLLGRDILA 245
Score = 47.6 bits (108), Expect = 4e-04
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD-FGHTSYV 690
A TGSGKT A++LP I+ + P AL+L PTRELA QI++ A + +
Sbjct: 247 ADTGSGKTAAFLLPVIMRA-----LFESKTPSALILTPTRELAIQIERQAKELMSGLPRM 301
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
+ + GG P Q L++ V++
Sbjct: 302 KTVLLVGGLPLPPQLYRLQQHVKV 325
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 60.5 bits (140), Expect = 5e-08
Identities = 35/111 (31%), Positives = 56/111 (50%)
Frame = +1
Query: 430 KDNGLQRTDAYSSSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 609
+D G A + + ++ AQTG+GKT + LP ++ I ++ + +
Sbjct: 21 EDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLP-LLEILSKGENAQSNQVR 79
Query: 610 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
ALVL PTRELA Q+ + ++G +++T VFGG Q L RG +I
Sbjct: 80 ALVLTPTRELAAQVAESVKNYGQHLSLKSTVVFGGVKINPQMMALRRGADI 130
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 60.5 bits (140), Expect = 5e-08
Identities = 33/83 (39%), Positives = 51/83 (61%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 693
AQTG+GKT A+ LP + I +P +++ P AL+L PTRELA Q+ + F +
Sbjct: 47 AQTGTGKTAAFGLPIVQKI--EPGLKK---PQALILCPTRELAIQVNEEIKSFCKGRGIT 101
Query: 694 NTCVFGGAPKREQARDLERGVEI 762
++GGAP +Q R L++GV++
Sbjct: 102 TVTLYGGAPIMDQKRALKKGVDL 124
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 60.5 bits (140), Expect = 5e-08
Identities = 33/83 (39%), Positives = 45/83 (54%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 693
A+TG+GKT A+ +P I + + P R P AL+L PTRELA Q++ A H +
Sbjct: 48 ARTGTGKTAAFGIPIIERLEHGPNSRN---PQALILTPTRELAVQVRDEIAKLTHGQRIN 104
Query: 694 NTCVFGGAPKREQARDLERGVEI 762
V+GG P R Q L+R I
Sbjct: 105 VVAVYGGKPLRSQMEKLKRAPHI 127
>UniRef50_A7PDS5 Cluster: Chromosome chr11 scaffold_13, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr11 scaffold_13, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 563
Score = 60.5 bits (140), Expect = 5e-08
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPP-IRRGDGPIALVLAPTRELAQQIQQVAADFGHT-SY 687
A TG+GKT+AY+ P I H++ P I R G ALVL PTREL Q+ ++ H +
Sbjct: 75 AATGTGKTIAYLAPVINHLHKYDPRIERSAGTFALVLVPTRELCMQVYEILQKLLHRFHW 134
Query: 688 VRNTCVFGGAPKREQARDLERGVEI 762
+ V GG + ++ L +G+ I
Sbjct: 135 IVPGYVMGGENRSKEKARLRKGISI 159
>UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa
homolog - Ciona savignyi (Pacific transparent sea
squirt)
Length = 770
Score = 60.5 bits (140), Expect = 5e-08
Identities = 36/93 (38%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVH-INN---QPPIRRGDGPIALVLAPTRELAQQIQQVA 663
++ AQTGSGKT A++LP + I N P A+V+ PTREL QI A
Sbjct: 351 RDLMACAQTGSGKTAAFLLPVLTKLITNGLQSSQFSEKQTPRAIVVGPTRELIYQIFLEA 410
Query: 664 ADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
F + VR +GG Q RDL+RG I
Sbjct: 411 RKFSRGTVVRPVVAYGGTSMNHQIRDLQRGCHI 443
Score = 43.2 bits (97), Expect = 0.008
Identities = 22/55 (40%), Positives = 29/55 (52%)
Frame = +2
Query: 347 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
V VSGV I FE A P+ V VK Y+ PTP+Q PI + ++L+A
Sbjct: 301 VEVSGVNAPKSIPTFEVAGLPETVLANVKRANYERPTPVQKYSIPIINADRDLMA 355
>UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1;
Dugesia japonica|Rep: Putative RNA helicase protein -
Dugesia japonica (Planarian)
Length = 515
Score = 60.5 bits (140), Expect = 5e-08
Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPP------IRRGDG----PIALVLAPTRELAQQIQQVA 663
A+TGSGKT+AY+ P + +I P +++ D P+ LVLAPTREL QI VA
Sbjct: 138 AETGSGKTIAYLAPLLNNIMKHYPEEMMNELKQNDEELQYPLLLVLAPTRELVNQITSVA 197
Query: 664 ADFGHTSYVRNTCVFGGAPKREQARDLERG 753
+++R+ V GG R Q D RG
Sbjct: 198 KTLLKLTHLRSVSVIGGVDARSQINDASRG 227
>UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_36,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1127
Score = 60.5 bits (140), Expect = 5e-08
Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQ---PPIR-RGDGPIALVLAPTRELAQQIQQVAADFGH 678
VA+TGSGKT Y+LP ++ I Q R R +GP L+LAPTREL QI Q + F
Sbjct: 143 VAETGSGKTFGYLLPGLIQIKCQNYGSNFRNRINGPEILILAPTRELVMQIAQQVSLFMK 202
Query: 679 TSYVRNTCVFGGAPKREQARDLERGVEI 762
+ + +GG + +QA+ ++R +I
Sbjct: 203 PNNLTVATAYGGQNRDQQAQQIKRNPDI 230
Score = 39.9 bits (89), Expect = 0.073
Identities = 17/81 (20%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +2
Query: 275 FYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHN---PIQYFEEANFPDYVQQGVKTMGY 445
++ P + P +V+++ +E+ + ++ P + FP +Q + + +
Sbjct: 61 YFQPQQLASQPMPEKVKDFLKANEIAIKAIDGQPCPYPFLTWGGTQFPPQIQNVIDGLNF 120
Query: 446 KEPTPIQAQGWPIAMSGKNLV 508
+ PTPIQ+ +P+ +SG +L+
Sbjct: 121 RAPTPIQSVVFPLILSGYDLI 141
>UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5;
Eukaryota|Rep: ATP-dependent RNA helicase vasa -
Drosophila melanogaster (Fruit fly)
Length = 661
Score = 60.5 bits (140), Expect = 5e-08
Identities = 32/89 (35%), Positives = 47/89 (52%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
++ AQTGSGKT A++LP + + P P ++++PTRELA QI A F
Sbjct: 283 RDLMACAQTGSGKTAAFLLPILSKLLEDPHELELGRPQVVIVSPTRELAIQIFNEARKFA 342
Query: 676 HTSYVRNTCVFGGAPKREQARDLERGVEI 762
SY++ V+GG R Q + RG +
Sbjct: 343 FESYLKIGIVYGGTSFRHQNECITRGCHV 371
Score = 53.6 bits (123), Expect = 6e-06
Identities = 26/59 (44%), Positives = 35/59 (59%)
Frame = +2
Query: 335 NNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
NN V V+G +V PIQ+F A+ D + V GYK PTPIQ P+ SG++L+A
Sbjct: 229 NNIPVKVTGSDVPQPIQHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMA 287
>UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2;
Idiomarina|Rep: ATP-dependent RNA helicase - Idiomarina
loihiensis
Length = 409
Score = 60.1 bits (139), Expect = 6e-08
Identities = 36/83 (43%), Positives = 50/83 (60%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 693
A TG+GKTLA++LPA+ H+ + P + G I LVLAPTRELA+QI + A F + +
Sbjct: 47 APTGTGKTLAFLLPALQHLLDFPRQQPGPARI-LVLAPTRELAEQIHEQAKQFEAKTGLT 105
Query: 694 NTCVFGGAPKREQARDLERGVEI 762
+ V GG Q LE+ +I
Sbjct: 106 SVVVTGGINYGSQLSVLEKTHDI 128
>UniRef50_Q5ENJ0 Cluster: Chloroplast RNA helicase; n=1; Heterocapsa
triquetra|Rep: Chloroplast RNA helicase - Heterocapsa
triquetra (Dinoflagellate)
Length = 324
Score = 60.1 bits (139), Expect = 6e-08
Identities = 39/88 (44%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
VA TGSGKTLA++LP + H+ Q G P LVLAPTREL QI A F +
Sbjct: 149 VAATGSGKTLAFLLPGMAHVAAQV----GTEPRMLVLAPTRELVMQIATEAEQFALGFRL 204
Query: 691 RNTCVFGG----APKREQARDLERGVEI 762
R FGG + Q+R L RGV++
Sbjct: 205 RLGLAFGGQDGEGDQMMQSRVLRRGVDV 232
>UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 491
Score = 60.1 bits (139), Expect = 6e-08
Identities = 33/83 (39%), Positives = 50/83 (60%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 693
A+TGSGKTLA+++PAI + + ++ DG I L++APTRELA QI VA + V
Sbjct: 71 AKTGSGKTLAFLIPAIDLLFRKNATKK-DGTIVLIVAPTRELADQIFDVATLLLKDTEVS 129
Query: 694 NTCVFGGAPKREQARDLERGVEI 762
+GG K+ + L+ G+ +
Sbjct: 130 FGAAYGGKEKKNETTLLKSGINL 152
>UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;
n=2; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 35 - Arabidopsis thaliana (Mouse-ear cress)
Length = 591
Score = 60.1 bits (139), Expect = 6e-08
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQ----IQQVAAD 669
+A TGSGKTL ++LP I+ + PI G+GPI L++ P+RELA+Q ++Q A
Sbjct: 189 IAFTGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVVEQFVAP 248
Query: 670 FGHTSY--VRNTCVFGGAPKREQARDLERGVEI 762
Y +R+ GG R Q ++RGV I
Sbjct: 249 LVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVHI 281
Score = 51.2 bits (117), Expect = 3e-05
Identities = 25/89 (28%), Positives = 47/89 (52%)
Frame = +2
Query: 242 GFCFIQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQ 421
G + +P + P + K S + + R + V+G ++ PI+ F++ FP V
Sbjct: 100 GITYTEPLLTG-WKPPLHIRKMSSKQRDLIRKQWHIIVNGDDIPPPIKNFKDMKFPRPVL 158
Query: 422 QGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
+K G +PTPIQ QG P+ ++G++++
Sbjct: 159 DTLKEKGIVQPTPIQVQGLPVILAGRDMI 187
>UniRef50_O60173 Cluster: ATP-dependent RNA helicase dbp7; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp7 - Schizosaccharomyces pombe (Fission
yeast)
Length = 709
Score = 60.1 bits (139), Expect = 6e-08
Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPP--IRRGDGPIALVLAPTRELAQQIQQVAADFGH--- 678
AQTGSGKTLAY+LP + + P R G A+++APTREL QQI VA +
Sbjct: 185 AQTGSGKTLAYLLPIVQRLIRLPKNLHTRTSGIYAVIMAPTRELCQQIYNVANKLNNNPL 244
Query: 679 TSYVRNTCVFGGAPKREQARDLERGVEI 762
+ ++ + V GG K+ + + +GV I
Sbjct: 245 SHWIVSCNVIGGEKKKSEKARIRKGVNI 272
>UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20;
Ascomycota|Rep: ATP-dependent RNA helicase DBP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 523
Score = 60.1 bits (139), Expect = 6e-08
Identities = 36/85 (42%), Positives = 48/85 (56%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
K+ VA+TGSGKT A+ +PAI H+ N R G LV++PTRELA QI
Sbjct: 150 KDVVGVAETGSGKTFAFGVPAISHLMNDQKKR---GIQVLVISPTRELASQIYDNLIVLT 206
Query: 676 HTSYVRNTCVFGGAPKREQARDLER 750
++ CV+GG PK EQ L++
Sbjct: 207 DKVGMQCCCVYGGVPKDEQRIQLKK 231
Score = 37.9 bits (84), Expect = 0.29
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +2
Query: 275 FYDPHPTVLKRSPYEVEEYRNNHEVTVS-GVEVH-NPIQYFEEANFPDYVQQGVKTMGYK 448
FY + +++EY +E+ V +++ P+ F+ + +Q + +
Sbjct: 76 FYVQSEALTSLPQSDIDEYFKENEIAVEDSLDLALRPLLSFDYLSLDSSIQAEISK--FP 133
Query: 449 EPTPIQAQGWPIAMSGKNLV 508
+PTPIQA WP +SGK++V
Sbjct: 134 KPTPIQAVAWPYLLSGKDVV 153
>UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP3 -
Ustilago maydis (Smut fungus)
Length = 585
Score = 60.1 bits (139), Expect = 6e-08
Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 7/100 (7%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPI-------RRGDGPIALVLAPTRELAQQIQ 654
K+ +A+TGSGKT A+ LPA+ H+ + + +G LV+APTRELA Q +
Sbjct: 197 KDVVGIAETGSGKTFAFGLPALQHLVTKHKVLDSGKKKAKGAQVNVLVIAPTRELAIQTE 256
Query: 655 QVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEISLLL 774
+ A G + + C++GG K+EQ R L + + +++
Sbjct: 257 ENMAKLGKSMGIGMICLYGGVSKQEQVRLLNQSPPVRIVV 296
Score = 35.5 bits (78), Expect = 1.6
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Frame = +2
Query: 308 SPYEVEEYRNNHEVTVSGVEVHN-----PIQYFEEAN--FPDYVQQGVKTMGYKEPTPIQ 466
+P + +H +T+ E N P+ F E + V++ + + G+ PTPIQ
Sbjct: 127 NPAAARAFVESHNITIEAPEESNERPPLPMVDFRELDGKVDAAVKKTLDSQGFSTPTPIQ 186
Query: 467 AQGWPIAMSGKNLV 508
A WP+ + K++V
Sbjct: 187 ACCWPVLLQNKDVV 200
>UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 540
Score = 59.7 bits (138), Expect = 8e-08
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVAAD- 669
K+ + +AQTG+GKT+A+++P I +I + +G G ALVLAPTREL QI + A
Sbjct: 39 KDITGLAQTGTGKTVAFLIPVIHNI-----LTKGIQGIAALVLAPTRELTMQIAEEAKKL 93
Query: 670 FGHTSYVRNTCVFGGAPKREQARDLE 747
H+ +R+ + GG + Q +DLE
Sbjct: 94 LKHSEGIRSVPIIGGTDYKSQNKDLE 119
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 59.7 bits (138), Expect = 8e-08
Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELAQQIQQVAADF 672
++ AQTG+GKT AY LP I ++ Q P AL+LAPTRELAQQ+ +
Sbjct: 41 RDVLAAAQTGTGKTAAYGLPLIQMLSRQSREETAPKHPRALILAPTRELAQQVFDNLKQY 100
Query: 673 GHTSYVRNTCVFGGAPKREQARDLERGVEI 762
+ + V+GG R Q L +GV+I
Sbjct: 101 AQHTELAIVTVYGGTSIRVQQEQLAKGVDI 130
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 59.7 bits (138), Expect = 8e-08
Identities = 30/84 (35%), Positives = 47/84 (55%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+AQTG+GKT A+ LP + +++ P L+L PTRELA QI + + +
Sbjct: 47 IAQTGTGKTAAFSLPILQNLSKHTRKIEPKSPRCLILTPTRELAIQIHENIEAYSKHLNM 106
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
++ +FGG + Q R L+ GV+I
Sbjct: 107 KHAVIFGGVGQNPQVRALQGGVDI 130
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 59.7 bits (138), Expect = 8e-08
Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
K+ +AQTG+GKT A+ LP + N+ +R P LVLAPTRELAQQ+ +
Sbjct: 44 KDVLGLAQTGTGKTAAFTLPLLARTQNE--VRE---PQVLVLAPTRELAQQVAMAVESYS 98
Query: 676 -HTSYVRNTCVFGGAPKREQARDLERG 753
H S V+ ++GG+ Q R L++G
Sbjct: 99 KHESNVKVASIYGGSDFGSQFRALKQG 125
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 59.7 bits (138), Expect = 8e-08
Identities = 31/84 (36%), Positives = 47/84 (55%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+AQTG+GKT A+++P + + N D LV+APTRELA QI +V G + +
Sbjct: 44 IAQTGTGKTAAFVIPVLNTLINVKKSEHTDIS-CLVMAPTRELAVQISEVFKKIGAYTRL 102
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
R C+ GG + Q + G++I
Sbjct: 103 RTVCITGGVEQEAQIAAADYGIDI 126
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 59.7 bits (138), Expect = 8e-08
Identities = 33/83 (39%), Positives = 45/83 (54%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 693
AQTG+GKT A LP + + P+ALVLAPTRELA QI +G +R
Sbjct: 46 AQTGTGKTAALALPILNQLGKNSRKSIPHHPLALVLAPTRELAIQIGDSFDAYGRHLKLR 105
Query: 694 NTCVFGGAPKREQARDLERGVEI 762
+ ++GG + Q + L+RG I
Sbjct: 106 SVLIYGGVGQGNQVKALKRGAHI 128
Score = 33.9 bits (74), Expect = 4.8
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
F+E VQ+ + YK PTPIQAQ P A+ G++++
Sbjct: 4 FQELKLIAPVQKALVEENYKIPTPIQAQTIPAALEGRDVL 43
>UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Actinobacteria (class)|Rep: DEAD/DEAH box helicase
domain protein - Arthrobacter sp. (strain FB24)
Length = 635
Score = 59.7 bits (138), Expect = 8e-08
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Frame = +1
Query: 475 LADSYVWKEFSCVAQTGSGKTLAYILPAIVHINNQPP--IRRGDGPIALVLAPTRELAQQ 648
L D+ ++ +TGSGKT+A+ +P + + + R+ P+ LVLAPTRELA Q
Sbjct: 33 LPDTLAGRDVLGRGRTGSGKTIAFAIPLVARLAEREAKHFRKPGRPMGLVLAPTRELATQ 92
Query: 649 IQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
I + T ++GG + Q + L GV+I
Sbjct: 93 INATIEPMAKAMGLNTTVIYGGISQARQEKALRAGVDI 130
>UniRef50_A7AM30 Cluster: RNA helicase family protein; n=1; Babesia
bovis|Rep: RNA helicase family protein - Babesia bovis
Length = 1100
Score = 59.7 bits (138), Expect = 8e-08
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPI--RRGDGPIALVLAPTRELAQQIQQVAADFGHTSY 687
+ SGKTLAY+LP I + + R + P ALVL P RELA QI V GH
Sbjct: 525 SNAASGKTLAYLLPIIQKLKKHETLKLRHPNAPRALVLVPNRELADQILHVVKGLGHVVK 584
Query: 688 VRNTCVFGGAPKREQARDLERGVEI 762
+ + + GG K Q D++R V++
Sbjct: 585 ISSEIISGGVYKGIQRDDMKRLVDV 609
>UniRef50_A6RSH5 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 877
Score = 59.7 bits (138), Expect = 8e-08
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHI----NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHT 681
A+TGSGKTLAY+LP + I N I R G A++L+PTREL +QI V
Sbjct: 301 AETGSGKTLAYLLPIVERILALSENGVQIHRDSGLFAIILSPTRELCKQIAAVLEKVLRC 360
Query: 682 S-YVRNTCVFGGAPKREQARDLERGVEI 762
+ ++ T V GG K+ + L +GV I
Sbjct: 361 APWIVGTTVNGGESKQSEKARLRKGVNI 388
>UniRef50_Q9H8H2 Cluster: Probable ATP-dependent RNA helicase DDX31;
n=30; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX31 - Homo sapiens (Human)
Length = 851
Score = 59.7 bits (138), Expect = 8e-08
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINN-QPPIRRGDGPIALVLAPTRELA-QQIQQVAADFGHTSY 687
+QTGSGKTLAY +P + + + I+R DGP ALVL PTRELA Q V ++
Sbjct: 275 SQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQSFDTVQKLLKPFTW 334
Query: 688 VRNTCVFGGAPKREQARDLERGVEI 762
+ + GG ++ + L +G+ I
Sbjct: 335 IVPGVLMGGEKRKSEKARLRKGINI 359
>UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:
RNA helicase II/Gu - Xenopus laevis (African clawed
frog)
Length = 800
Score = 59.3 bits (137), Expect = 1e-07
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Frame = +1
Query: 487 YVWKEFSCVAQTGSGKTLAYILPAIVHIN-NQPPIRRGDGPIALVLAPTRELAQQIQQVA 663
Y K+ A+TG+GKT ++ +P + ++ +Q P+ RG P ++L PTRELA QI
Sbjct: 256 YSGKDVVVQARTGTGKTFSFGIPLVERLSEDQQPLARGRAPRVIILTPTRELAIQITNEL 315
Query: 664 ADFGHTSYVRNTCVFGGAPKREQARDLERGVE 759
T ++ C +GG P ++Q ++ G++
Sbjct: 316 RSM--TKKLKVACFYGGTPYQQQVFAIKDGID 345
>UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=19; Vibrio cholerae|Rep: ATP-dependent RNA
helicase, DEAD box family - Vibrio cholerae
Length = 428
Score = 59.3 bits (137), Expect = 1e-07
Identities = 35/89 (39%), Positives = 44/89 (49%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
K+ +A TGSGKTLAY LP + + P + ALVL PTRELA Q+ +V G
Sbjct: 60 KDVFALANTGSGKTLAYGLPLLERLKTSPEQQ------ALVLVPTRELAMQVSEVLTHVG 113
Query: 676 HTSYVRNTCVFGGAPKREQARDLERGVEI 762
+ C+ GG K EQ L I
Sbjct: 114 TALGLNTLCLCGGVDKTEQQNALAENPNI 142
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 59.3 bits (137), Expect = 1e-07
Identities = 33/108 (30%), Positives = 57/108 (52%)
Frame = +1
Query: 439 GLQRTDAYSSSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 618
G + ++ + + ++ VAQTG+GKT +++LP I + + R P +L+
Sbjct: 20 GYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMIDILAHGRC--RARMPRSLI 77
Query: 619 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
L PTRELA Q+ + +G + + + GG P EQ LE+GV++
Sbjct: 78 LEPTRELAAQVAENFEKYGKYHKLSMSLLIGGVPMAEQQAALEKGVDV 125
Score = 33.5 bits (73), Expect = 6.3
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
F + + Q V +GY+EPTP+QA P + ++L+A
Sbjct: 3 FADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIA 43
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 59.3 bits (137), Expect = 1e-07
Identities = 40/98 (40%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAI----VHINN---QPPIRR-GDGPI-ALVLAPTRELAQQ 648
K+ AQTG+GKT A+ LP + H +N QP + PI ALVL PTRELAQQ
Sbjct: 39 KDVMAGAQTGTGKTAAFALPLLHQLLTHQDNLAAQPDTQHINSTPITALVLVPTRELAQQ 98
Query: 649 IQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
+ + + S V + V+GG EQ R L G I
Sbjct: 99 VHSSIEQYAYGSSVTSVMVYGGVSIGEQIRQLANGTHI 136
Score = 33.1 bits (72), Expect = 8.4
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +2
Query: 443 YKEPTPIQAQGWPIAMSGKNLVA 511
Y++PTPIQ Q P+ +SGK+++A
Sbjct: 21 YQQPTPIQLQAIPVILSGKDVMA 43
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 59.3 bits (137), Expect = 1e-07
Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI-QQVAADFGHTSYV 690
AQTG+GKT A+ LP I NN R P LVLAPTRELA Q+ +Q A + +
Sbjct: 51 AQTGTGKTAAFALPLI---NNMDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNL 107
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
C++GG Q R L++GV++
Sbjct: 108 DVACIYGGQEYGSQIRALKQGVKV 131
>UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=1;
Limnobacter sp. MED105|Rep: Putative ATP-dependent RNA
helicase - Limnobacter sp. MED105
Length = 617
Score = 59.3 bits (137), Expect = 1e-07
Identities = 38/86 (44%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHI--NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF-GHTS 684
+QTGSGKT ++LP + + Q P+ GP LVL PTRELAQQ+ Q A + T
Sbjct: 45 SQTGSGKTFGFLLPVMHRMMTGEQSPMEMLAGPECLVLCPTRELAQQVSQDAINLVKFTK 104
Query: 685 YVRNTCVFGGAPKREQARDLERGVEI 762
VR V GG P +Q L RG I
Sbjct: 105 GVRVATVVGGMPYGKQMASL-RGARI 129
>UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box
family protein; n=1; Pseudoalteromonas tunicata D2|Rep:
ATP-dependent RNA helicase, DEAD box family protein -
Pseudoalteromonas tunicata D2
Length = 416
Score = 59.3 bits (137), Expect = 1e-07
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAADFGHTSY 687
+A TG+GKT AY+LP + ++ P+ AL L PTRELA Q+++ A +G
Sbjct: 45 IAPTGTGKTAAYLLPTLQELSRVDNSAEQVRPVRALFLVPTRELAVQVEESIAKYGKGLN 104
Query: 688 VRNTCVFGGAPKREQARDLERGVEI 762
+R VFGG Q +RG +I
Sbjct: 105 LRTISVFGGVRIPSQVNRFKRGADI 129
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 59.3 bits (137), Expect = 1e-07
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI--ALVLAPTRELAQQIQQVAAD 669
K+ AQTG+GKT ++ LP + ++ QP D P+ ALV+ PTRELA Q+
Sbjct: 60 KDIMACAQTGTGKTASFALPVLEQLSKQP----NDKPLLRALVMTPTRELAIQVCANIQK 115
Query: 670 FGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
+ ++ V+GGA Q + +E+GV+I
Sbjct: 116 YSQFLPLKTLAVYGGANMNPQRKGVEQGVDI 146
>UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2;
Ostreococcus|Rep: ATP-dependent RNA helicase -
Ostreococcus tauri
Length = 683
Score = 59.3 bits (137), Expect = 1e-07
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHI--NNQPPIRRG-DGPIALVLAPTRELAQQIQQVAADFGHTS 684
A+TG+GKTLA+ LP I + N + RG P +VLAPTRELA+Q++ F
Sbjct: 69 ARTGTGKTLAFSLPVIEKLLSNGRGSGGRGYRNPKCIVLAPTRELAKQVENEI--FITAP 126
Query: 685 YVRNTCVFGGAPKREQARDLERGVEI 762
+ CV+GG P +Q L RGV+I
Sbjct: 127 TLDTACVYGGTPIGQQESKLRRGVDI 152
>UniRef50_A4S507 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 560
Score = 59.3 bits (137), Expect = 1e-07
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINN-QPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHT-SY 687
A+TGSGKTL+YI P I P + R +G LVL PTRELA Q++ A G +
Sbjct: 45 AETGSGKTLSYIAPLYSKIGGITPRVTREEGTRGLVLVPTRELATQVEDTARRVGRPFHW 104
Query: 688 VRNTCVFGGAPKREQARDLERGVEI 762
V + + GG + ++ L +GV +
Sbjct: 105 VVTSSIMGGENRAKEKARLRKGVSL 129
>UniRef50_Q39189 Cluster: DEAD-box ATP-dependent RNA helicase 7;
n=9; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 7 - Arabidopsis thaliana (Mouse-ear cress)
Length = 671
Score = 59.3 bits (137), Expect = 1e-07
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRR-----GDGPIALVLAPTRELAQQIQQVAADFGH 678
A+TG GKTLA++LP + + N P + G P LVL PTRELA+Q+ +G
Sbjct: 140 ARTGQGKTLAFVLPILESLVNGPAKSKRKMGYGRSPSVLVLLPTRELAKQVAADFDAYGG 199
Query: 679 TSYVRNTCVFGGAPKREQARDLERGVEI 762
+ + + C++GG Q L+RGV+I
Sbjct: 200 SLGLSSCCLYGGDSYPVQEGKLKRGVDI 227
>UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 542
Score = 58.8 bits (136), Expect = 1e-07
Identities = 33/89 (37%), Positives = 52/89 (58%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
K+ A+TGSGKTLA+++P IV I N+ + +G A++++PTRELA Q V
Sbjct: 119 KDIMAKARTGSGKTLAFLIP-IVEILNKIHFQTRNGTGAIIISPTRELAIQTFDVLEKIL 177
Query: 676 HTSYVRNTCVFGGAPKREQARDLERGVEI 762
S T + GG+ K+++ L++G I
Sbjct: 178 AHSERTRTLIIGGSSKKKEEEALKKGASI 206
>UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28;
Alphaproteobacteria|Rep: Cold-shock dead-box protein A -
Bradyrhizobium japonicum
Length = 650
Score = 58.8 bits (136), Expect = 1e-07
Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Frame = +1
Query: 475 LADSYVWKEFSCVAQTGSGKTLAYILPAIVHI-NNQPPIRRGDGPIALVLAPTRELAQQI 651
L + ++ AQTGSGKTLAY L + + R P+AL++APTRELA Q+
Sbjct: 30 LTEEAAGRDLLVSAQTGSGKTLAYGLALAKDLLDGIERFERAGAPLALIVAPTRELALQV 89
Query: 652 Q-QVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
Q ++A + H +CV G P+REQ R+L G I
Sbjct: 90 QRELAWLYEHADGRVVSCVGGMDPRREQ-RELAAGAHI 126
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 58.8 bits (136), Expect = 1e-07
Identities = 34/83 (40%), Positives = 44/83 (53%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 693
A TG+GKT AY+LP + I +RG L++ PTRELA Q+ A G VR
Sbjct: 46 APTGTGKTAAYLLPVLQRI------QRGKKAQVLIVTPTRELALQVADEVAKLGKYLKVR 99
Query: 694 NTCVFGGAPKREQARDLERGVEI 762
V+GG Q R L +GVE+
Sbjct: 100 ALAVYGGQAIERQIRGLRQGVEV 122
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 58.8 bits (136), Expect = 1e-07
Identities = 35/84 (41%), Positives = 47/84 (55%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+AQTG+GKT AY LP I + + P RG LV+APTRELA QI G + +
Sbjct: 44 LAQTGTGKTAAYALPIIQKMLSTP---RGRVR-TLVIAPTRELACQISDSFRSLGQRARI 99
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
R ++GG +Q R L GV++
Sbjct: 100 RECSIYGGVNMDQQIRRLRSGVDV 123
Score = 47.2 bits (107), Expect = 5e-04
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
FE NF V GV+ GYKEPTPIQAQ P M+G +++
Sbjct: 3 FESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVI 42
>UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3;
Eutheria|Rep: Nucleolar protein GU2 variant - Homo
sapiens (Human)
Length = 363
Score = 58.8 bits (136), Expect = 1e-07
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Frame = +1
Query: 487 YVWKEFSCVAQTGSGKTLAYILPAIVHIN-NQPPIRRGDGPIALVLAPTRELAQQIQQVA 663
Y K+ A+TG+GKT ++ +P I + NQ I++ P LVLAPT ELA Q+ +
Sbjct: 172 YEGKDLIAQARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVLVLAPTGELANQVAKDF 231
Query: 664 ADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
D T + C +GG + Q + G++I
Sbjct: 232 KDI--TRKLSVACFYGGTSYQSQINHIRNGIDI 262
>UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=30;
cellular organisms|Rep: DEAD/DEAH box helicase-like
protein - Silicibacter sp. (strain TM1040)
Length = 710
Score = 58.4 bits (135), Expect = 2e-07
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = +1
Query: 514 AQTGSGKTLAYILP-AIVHINNQPPIRRGDGPIALVLAPTRELAQQI-QQVAADFGHTSY 687
AQTGSGKT+ + L A + R P+ALV+APTRELA Q+ ++++ +G
Sbjct: 46 AQTGSGKTVGFGLAIAPTILGEDGTFERAASPLALVIAPTRELALQVKRELSWLYGDAGA 105
Query: 688 VRNTCVFGGAPKREQARDLERGVEI 762
V +CV GG R++ R LERG I
Sbjct: 106 VLASCV-GGMDMRDERRALERGAHI 129
>UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 630
Score = 58.4 bits (135), Expect = 2e-07
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVAAD---- 669
+A TGSGKT+ ++LP ++ Q P R +GP L++ P+RELA+QI + +
Sbjct: 233 IASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEMFDA 292
Query: 670 FGHTSY--VRNTCVFGGAPKREQARDLERGVEI 762
G +R GG P EQA+D+ G+ I
Sbjct: 293 LGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHI 325
Score = 40.7 bits (91), Expect = 0.042
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +2
Query: 284 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 460
P + ++S + E R ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 461 IQAQGWPIAMSGKNLV 508
IQ QG P+A+SG++++
Sbjct: 216 IQIQGIPVALSGRDMI 231
>UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5;
Trypanosomatidae|Rep: DEAD box RNA helicase, putative -
Leishmania major
Length = 527
Score = 58.4 bits (135), Expect = 2e-07
Identities = 42/113 (37%), Positives = 56/113 (49%)
Frame = +1
Query: 412 LCATRCKDNGLQRTDAYSSSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHINNQPPIR 591
LCA C D G Q +S + ++ VAQTGSGKT AY LP + + Q R
Sbjct: 64 LCAA-CADAGWQHPTRIQASTITVFAEGRDLIGVAQTGSGKTGAYALPLVNWLLAQ---R 119
Query: 592 RGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER 750
+ LV+ PTRELAQQ+ G + +R + GGA EQA +L +
Sbjct: 120 KTPYLSVLVMVPTRELAQQVTAQFVLLGRSVGLRVATLVGGADMVEQACELSK 172
>UniRef50_Q7XJN0 Cluster: DEAD-box ATP-dependent RNA helicase 17;
n=6; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 17 - Arabidopsis thaliana (Mouse-ear cress)
Length = 609
Score = 58.4 bits (135), Expect = 2e-07
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHI-NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHT-SY 687
A TG+GKT+AY+ P I H+ + P + R G ALV+ PTREL Q+ + H +
Sbjct: 74 APTGTGKTIAYLAPLIHHLQGHSPKVDRSHGTFALVIVPTRELCLQVYETLEKLLHRFHW 133
Query: 688 VRNTCVFGGAPKREQARDLERGVEI 762
+ V GG K ++ L +G+ I
Sbjct: 134 IVPGYVMGGEKKAKEKARLRKGISI 158
>UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Rhodococcus sp. (strain RHA1)
Length = 465
Score = 58.0 bits (134), Expect = 3e-07
Identities = 36/83 (43%), Positives = 48/83 (57%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 693
A TGSGKTLA+ LP +V + RRG P +VL PTRELA QI++ + + +R
Sbjct: 58 APTGSGKTLAFGLPMLVRLKGAAS-RRGF-PRGIVLVPTRELALQIERALDEPALSVGLR 115
Query: 694 NTCVFGGAPKREQARDLERGVEI 762
V GG P + Q L RGV++
Sbjct: 116 VANVVGGIPIKRQVEILSRGVDL 138
>UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3;
Rhodospirillales|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 731
Score = 58.0 bits (134), Expect = 3e-07
Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +1
Query: 514 AQTGSGKTLAYILP-AIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
AQTGSGKT+AY L A + + + P+AL++APTRELA Q+QQ +
Sbjct: 87 AQTGSGKTVAYGLALADTLLGADERLGQAGAPLALIVAPTRELAMQVQQELLWLYGPAGA 146
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
R GG R +A+ LERG I
Sbjct: 147 RVVSCIGGMDARREAQALERGCHI 170
>UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: ATP-dependent RNA
helicase - Lentisphaera araneosa HTCC2155
Length = 542
Score = 58.0 bits (134), Expect = 3e-07
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELAQQIQQVAADF 672
++ + AQTG+GKT A+++ H N P G P AL+LAPTRELA QI A
Sbjct: 153 QDVAAKAQTGTGKTAAFLISMYNHFVNNPQTEVKAGTPRALILAPTRELALQIGADAEGL 212
Query: 673 GHTSYVRNTCVFGGAPKREQARDLERGVEISL 768
G +R FGG +QA+ L V+I++
Sbjct: 213 GKYCDIRVETFFGGMDFDKQAQILRGRVDIAV 244
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 58.0 bits (134), Expect = 3e-07
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
Frame = +1
Query: 439 GLQRTDAYSSSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDG--PIA 612
G + ++ + + + AQTG+GKT A++LP++ + P+
Sbjct: 48 GYENPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFMLPSLERLKRYATASTSPAMHPVR 107
Query: 613 -LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
LVL PTRELA QI Q + +R+T +FGG +Q DL G EI
Sbjct: 108 MLVLTPTRELADQIDQNVQSYIKNLPLRHTVLFGGMNMDKQTADLRAGCEI 158
>UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05414 protein - Schistosoma
japonicum (Blood fluke)
Length = 325
Score = 58.0 bits (134), Expect = 3e-07
Identities = 35/114 (30%), Positives = 62/114 (54%), Gaps = 3/114 (2%)
Frame = +1
Query: 430 KDNGLQRTDAYSSSRLADSYVWKEFSCVAQTGSGKTLAYILPAI---VHINNQPPIRRGD 600
KD G + + ++ A+TGSGKTLA+++P + + + QP R G
Sbjct: 66 KDMGFTHMTDIQNKCIPQLLEHRDIMACAKTGSGKTLAFLIPVVELMLSLGLQP--RNGT 123
Query: 601 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
G A++++PTREL+ Q V + + +R + GG+ ++ +A++LE+GV I
Sbjct: 124 G--AIIISPTRELSLQTYGVLTELIQFTNLRIGLIMGGSNRQTEAQNLEKGVTI 175
>UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 441
Score = 58.0 bits (134), Expect = 3e-07
Identities = 38/112 (33%), Positives = 54/112 (48%)
Frame = +1
Query: 427 CKDNGLQRTDAYSSSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP 606
CK+ G+ + A + + ++QTG+GKT A+ LP I ++ P G
Sbjct: 18 CKEIGISKPTAVQQACVKQIITGHNCIVISQTGTGKTAAFALPIISTLSKDPY-----GI 72
Query: 607 IALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
ALV++PTRELAQQI Q FG + GG +QA LE+ I
Sbjct: 73 YALVISPTRELAQQICQQFKIFGRGMNADICPIIGGLAITDQASALEKNPHI 124
>UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2;
Gammaproteobacteria|Rep: ATP-dependent RNA helicase rhlB
- Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 430
Score = 58.0 bits (134), Expect = 3e-07
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPI--RRGDGPIALVLAPTRELAQQIQQVAADFGHTSY 687
AQTG+GKTLA++ ++ + P R+ + P AL++APTRELA QI A H +
Sbjct: 53 AQTGTGKTLAFLASTFHYLLSHPANAERQTNQPRALIMAPTRELAVQIHSDAEALSHLTG 112
Query: 688 VRNTCVFGGAPKREQARDLERGVEI 762
++ +GG +Q + LE GV+I
Sbjct: 113 LKLGLAYGGDGYDKQLKVLENGVDI 137
>UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Yarrowia lipolytica (Candida lipolytica)
Length = 974
Score = 58.0 bits (134), Expect = 3e-07
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRR--------GDGPIALVLAPTRELAQQIQQVAA 666
VA+TGSGKTLA++LP + HI ++ + P+ +++ PTREL QI +
Sbjct: 421 VAKTGSGKTLAFLLPMLRHIKHRVGVETHTTTLSGASSHPLGVIITPTRELCVQIYRDLR 480
Query: 667 DFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
F + C +GG+P ++Q L++G I
Sbjct: 481 PFLAALELTAVCAYGGSPIKDQIAALKKGTHI 512
Score = 39.5 bits (88), Expect = 0.096
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +2
Query: 257 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 433
+ F + FY + + E E R + + + + G + PI + + P +
Sbjct: 335 EDFRRQFYVESSELADMTEAETNELRLSLDGIKIRGKDCPKPISKWTQLGLPGPTMGVLN 394
Query: 434 TMGYKEPTPIQAQGWPIAMSGKNLVA 511
+ Y +PT IQAQ P MSG+++++
Sbjct: 395 DLRYDKPTSIQAQAIPAVMSGRDVIS 420
>UniRef50_Q6C835 Cluster: ATP-dependent RNA helicase DBP7; n=1;
Yarrowia lipolytica|Rep: ATP-dependent RNA helicase DBP7
- Yarrowia lipolytica (Candida lipolytica)
Length = 799
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS--Y 687
AQTGSGKTLA++LP + I + + R G A++L PTREL QI V + +
Sbjct: 278 AQTGSGKTLAFVLPVLERIMSCDDVSRETGLFAVILTPTRELTTQIYSVLETLCRKACPW 337
Query: 688 VRNTCVFGGAPKREQARDLERGVEI 762
+ V GG K+ + + +GV I
Sbjct: 338 IVPGIVIGGEKKKSEKARIRKGVNI 362
>UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_03001730;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001730 - Ferroplasma acidarmanus fer1
Length = 430
Score = 57.6 bits (133), Expect = 3e-07
Identities = 31/77 (40%), Positives = 46/77 (59%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 693
++TGSGKT AY+LP + N +G A+++ PTRELA Q +VA+ G S ++
Sbjct: 40 SKTGSGKTAAYLLPVL----NSVEKLKGKSVKAIIILPTRELALQTHRVASRLGKISGIK 95
Query: 694 NTCVFGGAPKREQARDL 744
+T V+GGA Q +L
Sbjct: 96 STIVYGGASIIRQVEEL 112
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 57.6 bits (133), Expect = 3e-07
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINN--QPPIRRGDGPI-ALVLAPTRELAQQIQQVAA 666
K+ AQTG+GKT + LP + + + P+ AL++APTRELA QI +
Sbjct: 43 KDVMASAQTGTGKTAGFTLPLLYRLQAYANTSVSPARHPVRALIMAPTRELAMQIDESVR 102
Query: 667 DFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
+G +R VFGG Q L+ GVEI
Sbjct: 103 KYGKYLALRTAVVFGGINIEPQIAALQAGVEI 134
Score = 33.1 bits (72), Expect = 8.4
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
F + + V GY PTPIQAQ P ++GK+++A
Sbjct: 7 FAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMA 47
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 57.6 bits (133), Expect = 3e-07
Identities = 30/84 (35%), Positives = 45/84 (53%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+AQTG+GKT A+ LP I + +L+L PTRELA QI Q D+ +
Sbjct: 45 IAQTGTGKTAAFSLPIINKFGRNKIDIKAKSTRSLILTPTRELASQIMQNIDDYSDGLGL 104
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
+ V+GG ++ Q +E G++I
Sbjct: 105 KTKVVYGGVGRQAQVDSIELGLDI 128
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 57.6 bits (133), Expect = 3e-07
Identities = 37/111 (33%), Positives = 55/111 (49%)
Frame = +1
Query: 430 KDNGLQRTDAYSSSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 609
K+ G R + + + ++ A TGSGKT A++LP + + ++P RG
Sbjct: 17 KELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQLIDRP---RGTTR- 72
Query: 610 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
ALV+ PTRELA QI + D + + VFGG R Q RGV++
Sbjct: 73 ALVITPTRELAAQILEDLNDLAVHTPISAAAVFGGVSIRPQEHAFRRGVDV 123
Score = 35.1 bits (77), Expect = 2.1
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +2
Query: 422 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
+ +K +G+ PTPIQA P AMSG++++A
Sbjct: 14 KALKELGFPRPTPIQADAIPPAMSGRDVMA 43
>UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=4;
Sphingobacteriales|Rep: Possible ATP-dependent RNA
helicase - Cytophaga hutchinsonii (strain ATCC 33406 /
NCIMB 9469)
Length = 463
Score = 57.6 bits (133), Expect = 3e-07
Identities = 31/84 (36%), Positives = 46/84 (54%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
VAQTG+GKT AY LP ++ I +G P A++ PTREL QI+ + +
Sbjct: 48 VAQTGTGKTAAYALPILMKIK----YAQGHNPRAVIFGPTRELVMQIEIAMKQLAKYTDL 103
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
R ++GG + Q L++GV+I
Sbjct: 104 RIVALYGGIGPKLQKEHLQKGVDI 127
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 57.6 bits (133), Expect = 3e-07
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHI--NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 684
+AQTG+GKT A+ LP + + + +P RRG LVL+PTRELA QI + D+G
Sbjct: 108 IAQTGTGKTAAFALPILHRLAEDKKPAPRRGFR--CLVLSPTRELATQIAESFRDYGKHM 165
Query: 685 YVRNTCVFGGAPKREQARDLERGVEI 762
+ +FGG Q + L GV++
Sbjct: 166 GLTVATIFGGVKYGPQMKALAAGVDV 191
Score = 36.7 bits (81), Expect = 0.68
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +2
Query: 332 RNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
R +H + + + + F + + + + GY PTPIQAQ P+ MSG++L+
Sbjct: 48 RGSHAPSRAAARETHSLTQFTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLL 106
>UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Maricaulis maris (strain MCS10)
Length = 787
Score = 57.6 bits (133), Expect = 3e-07
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Frame = +1
Query: 418 ATRCKDNGLQRTDAYSSSRLADSYVWKEFSCVAQTGSGKTLAY-ILPAIVHINNQPPIRR 594
A + G S+ +A+ ++ AQTGSGKT A+ + A + + R
Sbjct: 12 AAALEKKGYAALTEVQSAVIAEEAEGRDLLVSAQTGSGKTAAFGMAMAKTLLGDDDQFNR 71
Query: 595 GDGPIALVLAPTRELAQQIQ-QVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
D P+AL++APTRELA Q+Q ++A +G +CV GG R + + LERG I
Sbjct: 72 PDLPMALIVAPTRELALQVQRELAWLYGEARGQIASCV-GGMDPRAERKALERGCHI 127
>UniRef50_Q3LWF0 Cluster: ATP-dependent RNA helicase; n=1;
Bigelowiella natans|Rep: ATP-dependent RNA helicase -
Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 507
Score = 57.6 bits (133), Expect = 3e-07
Identities = 30/74 (40%), Positives = 44/74 (59%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
K+ C+A+TGSGKTL Y++P IV +N +R +V+APTREL QI + +
Sbjct: 172 KDIFCLAKTGSGKTLCYLIPLIVGLNRLKNVRN------IVIAPTRELVLQIGRESYYLT 225
Query: 676 HTSYVRNTCVFGGA 717
S +R C +GG+
Sbjct: 226 KHSNIRTFCFYGGS 239
>UniRef50_Q7RFI2 Cluster: Drosophila melanogaster BcDNA.GH02833;
n=1; Plasmodium yoelii yoelii|Rep: Drosophila
melanogaster BcDNA.GH02833 - Plasmodium yoelii yoelii
Length = 854
Score = 57.6 bits (133), Expect = 3e-07
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 678
+ TGSGKTL Y LPA+ I N I R G LVL+PTRELA QI + +
Sbjct: 194 SMTGSGKTLCYALPAVQKILNLKEKNNIKITREMGTFILVLSPTRELAIQINNLLSILTK 253
Query: 679 T-SYVRNTCVFGGAPKREQARDLERGVEI 762
Y+ +C+ GG K+ + + +G+ I
Sbjct: 254 AYPYIVVSCIIGGEKKKSEKNRIRKGISI 282
>UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2;
Theileria|Rep: RNA helicase, putative - Theileria
annulata
Length = 620
Score = 57.6 bits (133), Expect = 3e-07
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 11/95 (11%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVH---INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHT 681
V+ TG+GKTL +++P I+ I + PI +GP LV+ P+RELA QI + F T
Sbjct: 232 VSSTGTGKTLVFVIPMIMQSWEIELRLPIESREGPFGLVICPSRELASQISDITKYF--T 289
Query: 682 SYVRN--------TCVFGGAPKREQARDLERGVEI 762
Y+ N +CV GG ++Q ++ GV +
Sbjct: 290 GYIYNYGGPKLYCSCVIGGTDIKDQEFTIKSGVHM 324
Score = 37.9 bits (84), Expect = 0.29
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +2
Query: 320 VEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 499
V+ RN + VSG +V PI FE+ P + + + EPT IQ Q P + G+
Sbjct: 168 VDSIRNALLIDVSGDQVPPPILNFEDMKLPKPILKALNHKKIFEPTKIQMQALPSVLLGR 227
Query: 500 NLV 508
+++
Sbjct: 228 DVI 230
>UniRef50_A7SVK2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 349
Score = 57.6 bits (133), Expect = 3e-07
Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Frame = +1
Query: 508 CVAQTGSGKTLAYILPAIVHINNQPPIRRG-----DGPIALVLAPTRELAQQIQQVAADF 672
C AQTGSGKTLAY+ P +VH + R G P A ++ P RELA QI + A
Sbjct: 44 CAAQTGSGKTLAYLAP-LVHRLREDEERHGILARLKRPRACIVVPARELATQILKTAKSL 102
Query: 673 GHTSYVRNTCVFGGAPKREQARDLERGVEI 762
H + R+ + GG ++ DLE V++
Sbjct: 103 CHHARFRSVGLIGGRKQKWMRDDLESPVDL 132
>UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 487
Score = 57.6 bits (133), Expect = 3e-07
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 10/94 (10%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVAADF--- 672
+A TGSGKTL + LP I+ Q P +R +GP +++ P+RELA+Q +V F
Sbjct: 90 IAFTGSGKTLVFTLPIIMFSLEQEKAMPFQRNEGPYGMIVVPSRELARQTFEVITHFSRA 149
Query: 673 ----GHTSYVRNTCVFGGAPKREQARDLERGVEI 762
G S N C+ GG+ +EQ+ ++RGV +
Sbjct: 150 LEAHGFPSLRTNLCI-GGSSIKEQSDAMKRGVHM 182
Score = 52.4 bits (120), Expect = 1e-05
Identities = 22/77 (28%), Positives = 40/77 (51%)
Frame = +2
Query: 278 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 457
+ P +L ++E R + V G ++ P++ F+E FP + +K G PT
Sbjct: 12 WTPPRYILHMPKEKIERIRKKWHILVEGDDIPPPVKTFKEMKFPRPILAALKKKGITHPT 71
Query: 458 PIQAQGWPIAMSGKNLV 508
PIQ QG P ++G++++
Sbjct: 72 PIQVQGLPAVLTGRDMI 88
>UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 416
Score = 57.6 bits (133), Expect = 3e-07
Identities = 35/84 (41%), Positives = 43/84 (51%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
K+ A+TGSGKT AY+LP H+ P ALV APTRELA QI V D G
Sbjct: 44 KDICGTAETGSGKTGAYMLPIFHHMWENP-----HSFFALVFAPTRELATQIDHVTRDIG 98
Query: 676 HTSYVRNTCVFGGAPKREQARDLE 747
VR + GG + Q + L+
Sbjct: 99 KDIKVRVCTIIGGVDEDSQVKALK 122
>UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 640
Score = 57.6 bits (133), Expect = 3e-07
Identities = 30/83 (36%), Positives = 46/83 (55%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 693
A TGSGKTLA+I+P ++H+ QPP + + A++L+PTRELA Q +
Sbjct: 145 AVTGSGKTLAFIIPCLLHVLAQPPTGQYEA-AAVILSPTRELAYQTHIECQKIFSLMDKK 203
Query: 694 NTCVFGGAPKREQARDLERGVEI 762
+ C+ GG Q R ++ G +
Sbjct: 204 SACLVGGNDIENQLRAIKNGSNV 226
Score = 51.6 bits (118), Expect = 2e-05
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +2
Query: 260 PFNKNFYDPHPTVLKRSPYEVEEYRNN-HEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 436
P KN Y P + +S ++E+ R + V G+ V PI + + P + ++
Sbjct: 59 PIRKNIYIPSSEISSKSQTDIEDLRKRLGNIVVHGLNVLCPIVNWTDCGLPAPLMSHLRL 118
Query: 437 MGYKEPTPIQAQGWPIAMSGKNLV 508
G+K+PT IQ Q P +SG++++
Sbjct: 119 RGFKQPTSIQCQAIPCILSGRDII 142
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 57.6 bits (133), Expect = 3e-07
Identities = 33/83 (39%), Positives = 47/83 (56%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 693
++TGSGKT AY++P I + + IR AL+L PTRELA Q+ +V+ G S +R
Sbjct: 46 SKTGSGKTAAYLIPIINNTAKEKGIR------ALILLPTRELAVQVAKVSEALGKRSGIR 99
Query: 694 NTCVFGGAPKREQARDLERGVEI 762
V+GG +Q + RG I
Sbjct: 100 TVVVYGGVSINKQIELILRGANI 122
Score = 39.1 bits (87), Expect = 0.13
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
FEE N + + + ++ GY EPT +Q+ PIA++G +LV
Sbjct: 4 FEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLV 43
>UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82;
Proteobacteria|Rep: ATP-dependent RNA helicase srmB -
Escherichia coli (strain K12)
Length = 444
Score = 57.6 bits (133), Expect = 3e-07
Identities = 33/111 (29%), Positives = 54/111 (48%)
Frame = +1
Query: 430 KDNGLQRTDAYSSSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 609
+D G R A ++ + + ++ A TG+GKT AY+LPA+ H+ + P + G P
Sbjct: 20 QDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQHLLDFPRKKSGP-PR 78
Query: 610 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
L+L PTRELA Q+ A + +++ + GG A +I
Sbjct: 79 ILILTPTRELAMQVSDHARELAKHTHLDIATITGGVAYMNHAEVFSENQDI 129
>UniRef50_A5DAR2 Cluster: ATP-dependent RNA helicase DBP7; n=2;
Pichia guilliermondii|Rep: ATP-dependent RNA helicase
DBP7 - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 747
Score = 57.6 bits (133), Expect = 3e-07
Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQP--PIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSY 687
AQTGSGKTL+++LP + + + PI R G A+VL PTRELA QI V +
Sbjct: 181 AQTGSGKTLSFLLPILHKLMQEKKNPITRESGVFAIVLVPTRELANQIYGVLETLTRCHH 240
Query: 688 -VRNTCVFGGAPKREQARDLERGVEI 762
+ V GG K+ + + +GV I
Sbjct: 241 QIVPGIVIGGEKKKSEKARIRKGVNI 266
>UniRef50_Q5KAI2 Cluster: ATP-dependent RNA helicase DBP7; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP7 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 948
Score = 57.6 bits (133), Expect = 3e-07
Identities = 30/61 (49%), Positives = 41/61 (67%), Gaps = 3/61 (4%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAI---VHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 684
AQTGSGKTL+Y+LP + + ++ I R G +A++LAPTRELAQQI +V H S
Sbjct: 263 AQTGSGKTLSYLLPIVQTLLPLSRLSYIDRSIGTLAIILAPTRELAQQISKVLEQLLHMS 322
Query: 685 Y 687
+
Sbjct: 323 F 323
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 768,060,860
Number of Sequences: 1657284
Number of extensions: 15830990
Number of successful extensions: 45017
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 41431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44144
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68731504465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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