Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021836
(802 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 103 1e-22
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 2e-19
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 70 2e-12
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 5e-10
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 3e-09
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 3e-09
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 59 5e-09
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 58 8e-09
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 58 1e-08
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 55 6e-08
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 51 1e-06
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 48 7e-06
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 5e-05
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 45 6e-05
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 44 1e-04
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 44 1e-04
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 41 0.001
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 39 0.004
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 38 0.007
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 38 0.007
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 37 0.022
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 37 0.022
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 36 0.029
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 30 2.5
SB_6554| Best HMM Match : Isy1 (HMM E-Value=0) 30 2.5
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 103 bits (248), Expect = 1e-22
Identities = 47/75 (62%), Positives = 59/75 (78%)
Frame = +1
Query: 544 YILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 723
+ILP IVHIN+QP ++ GDGPI LVL PTRELAQQ+Q+VA G +R+TC++GGAPK
Sbjct: 113 FILPGIVHINHQPLLQPGDGPIVLVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPK 172
Query: 724 REQARDLERGVEISL 768
Q R+LERGVEI +
Sbjct: 173 GPQIRELERGVEICI 187
Score = 60.9 bits (141), Expect = 1e-09
Identities = 27/56 (48%), Positives = 37/56 (66%)
Frame = +2
Query: 305 RSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 472
R +EV+ YR + ++TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 57 RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ 112
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 93.5 bits (222), Expect = 2e-19
Identities = 44/84 (52%), Positives = 57/84 (67%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+A+TGSGKT A++ PA+VHI +QP ++ GDGPI L+ APTREL QQI A FG +
Sbjct: 560 IAKTGSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNI 619
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
VFGG K EQ++ L+ G EI
Sbjct: 620 HVVAVFGGGNKYEQSKALQEGAEI 643
Score = 73.3 bits (172), Expect = 2e-13
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Frame = +2
Query: 257 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 436
+PFNKNFY+ HP + K+S E+++ R + VSG P F F + + ++
Sbjct: 475 KPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDEQMMASIRK 534
Query: 437 MGYKEPTPIQAQGWPIAMSGKNLVA*LK----RVPAKRWP 544
+ Y +PT IQ Q PIA+SG++++ K + A WP
Sbjct: 535 LEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWP 574
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 732 SPGLGEGSRNIIATPGRLIDFLE 800
S L EG+ ++ATPGRLID ++
Sbjct: 634 SKALQEGAEIVVATPGRLIDHVK 656
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 70.1 bits (164), Expect = 2e-12
Identities = 37/75 (49%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFGH 678
VA+TGSGKT A+ +P +V I P I R + GP AL+LAPTRELAQQI++ FG
Sbjct: 144 VAETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFGR 203
Query: 679 TSYVRNTCVFGGAPK 723
+R V GGA +
Sbjct: 204 PLGIRTVSVIGGADR 218
Score = 51.6 bits (118), Expect = 7e-07
Identities = 20/60 (33%), Positives = 37/60 (61%)
Frame = +2
Query: 329 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
+R + ++ G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI + ++++
Sbjct: 83 FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDII 142
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 64.1 bits (149), Expect = 1e-10
Identities = 38/105 (36%), Positives = 52/105 (49%)
Frame = +1
Query: 439 GLQRTDAYSSSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 618
G +R + L ++ AQTGSGKT AY+LP + + Q P+AL
Sbjct: 498 GYRRPTPVQKAALPIVMAGRDLMACAQTGSGKTAAYMLPVLTSLIKQGLNAPPRSPLALC 557
Query: 619 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG 753
+APTRELA+QI A F + ++ +GG QA LERG
Sbjct: 558 VAPTRELAKQIYIEARKFSDHTPIKVCVCYGGVSVPYQASQLERG 602
Score = 41.5 bits (93), Expect = 8e-04
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +2
Query: 353 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
VSG I F E F + + + GY+ PTP+Q PI M+G++L+A
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMA 521
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 62.1 bits (144), Expect = 5e-10
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +2
Query: 257 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 433
QPF K+FY P + K +P E +E+R + E + V G P++ + + + +K
Sbjct: 62 QPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQLKILDVLK 121
Query: 434 TMGYKEPTPIQAQGWPIAMSGKNLVA 511
Y++PTPIQAQ P+ MSG++++A
Sbjct: 122 KNSYEKPTPIQAQAIPVIMSGRDMIA 147
Score = 53.2 bits (122), Expect = 2e-07
Identities = 30/77 (38%), Positives = 40/77 (51%)
Frame = +1
Query: 532 KTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFG 711
K +Y P + P I G IA+V+ PTRELA QI + F + +R CV+G
Sbjct: 121 KKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYG 180
Query: 712 GAPKREQARDLERGVEI 762
G EQ +L+RG EI
Sbjct: 181 GTGISEQIAELKRGAEI 197
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 59.7 bits (138), Expect = 3e-09
Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
AQ+G+GKT + + + I+ + G D ALVLAPTRELAQQIQ+V G +V
Sbjct: 129 AQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKVVLALGDYMHV 188
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
+ GG RE LE GV +
Sbjct: 189 KCHACIGGTNVREDRMKLEEGVHV 212
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 59.7 bits (138), Expect = 3e-09
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINN----QPPIRRGDGPIALVLAPTRELAQQIQQVA 663
++ AQTGSGKT A++LP + + N P A+ +APTRELA QI A
Sbjct: 749 RDVMACAQTGSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEA 808
Query: 664 ADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
F H + +R +GG Q R L+ G +
Sbjct: 809 RKFAHGTMLRPVVCYGGVSVSHQLRQLQSGCNL 841
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +2
Query: 344 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++++A
Sbjct: 698 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMA 753
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 58.8 bits (136), Expect = 5e-09
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 651
+A+TGSGKTLAY LP + + + P GD P+AL+L PTREL QQ+
Sbjct: 115 LAETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQV 161
Score = 49.2 bits (112), Expect = 4e-06
Identities = 28/101 (27%), Positives = 48/101 (47%)
Frame = +2
Query: 263 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 442
F ++YD + V + S V+E R + + + G + PI+ F + N P + +
Sbjct: 32 FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91
Query: 443 YKEPTPIQAQGWPIAMSGKNLVA*LKRVPAKRWPTSCQPLC 565
++ PTPIQ Q MSG++++ + K S PLC
Sbjct: 92 FQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSL-PLC 131
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 58.0 bits (134), Expect = 8e-09
Identities = 27/91 (29%), Positives = 48/91 (52%)
Frame = +2
Query: 278 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 457
Y HPT+ + +V++ R+ E+ V G V +P+ F +F + + + + GY PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 458 PIQAQGWPIAMSGKNLVA*LKRVPAKRWPTS 550
PIQ Q P+ +SG++++ K P+S
Sbjct: 221 PIQMQVLPVLLSGRDVMVCASTGSGKLLPSS 251
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 57.6 bits (133), Expect = 1e-08
Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Frame = +1
Query: 508 CVAQTGSGKTLAYILPAIVHINNQPPIRRG-----DGPIALVLAPTRELAQQIQQVAADF 672
C AQTGSGKTLAY+ P +VH + R G P A ++ P RELA QI + A
Sbjct: 420 CAAQTGSGKTLAYLAP-LVHRLREDEERHGILARLKRPRACIVVPARELATQILKTAKSL 478
Query: 673 GHTSYVRNTCVFGGAPKREQARDLERGVEI 762
H + R+ + GG ++ DLE V++
Sbjct: 479 CHHARFRSVGLIGGRKQKWMRDDLESPVDL 508
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 55.2 bits (127), Expect = 6e-08
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINN-QPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
A+TG+GKTL++ LP + + + + +RG P LV+APTRELA+Q+ + S +
Sbjct: 117 ARTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTRELAKQVGNEFENL--KSNL 174
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
C++GG P Q + G+++
Sbjct: 175 EVYCIYGGMPYEPQENAINSGLDV 198
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/111 (27%), Positives = 55/111 (49%)
Frame = +1
Query: 430 KDNGLQRTDAYSSSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 609
KD G +A ++ A+TGSGKTLA+++P +V + + + +G
Sbjct: 588 KDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVP-VVELLYKLQFKTRNGTG 646
Query: 610 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
++++PTREL+ Q VA D + GG ++ +A L++GV +
Sbjct: 647 VIIISPTRELSLQTYGVARDLLKHHNFTYGIIMGGVNRKAEAERLQKGVNL 697
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 50.8 bits (116), Expect = 1e-06
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 693
A+TGSGKTLA+++P I + Q DG ALV++PTRELA Q +V G+ +
Sbjct: 94 AKTGSGKTLAFLIPIIETLWRQKWTSM-DGLGALVISPTRELAYQTFEVLVKIGNKHDLS 152
Query: 694 NTCVFGGAP-KREQARDLERGVEI 762
+ GG K EQ R ++ + +
Sbjct: 153 AGLIIGGKDLKNEQKRIMKTNIVV 176
Score = 31.9 bits (69), Expect = 0.62
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 380 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
++ F + G+ G+ PT IQ QG P+A+SG++++
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVL 91
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 50.0 bits (114), Expect = 2e-06
Identities = 35/108 (32%), Positives = 51/108 (47%)
Frame = +1
Query: 439 GLQRTDAYSSSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 618
G ++ A + ++ AQ+G+GKT + + + I+ Q +R P ALV
Sbjct: 16 GFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAIDTQ--LRE---PQALV 70
Query: 619 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
L+PTRELA QIQ+V G V+ GG E R L+ G I
Sbjct: 71 LSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHI 118
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 48.4 bits (110), Expect = 7e-06
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +2
Query: 317 EVEEYRNNHEVTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 484
++ +R+ + V G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196
Query: 485 AMSG 496
G
Sbjct: 197 MAHG 200
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/73 (34%), Positives = 42/73 (57%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
K+ +A+TGSGKT A+++P + G AL+L+PTRELA Q Q+ + G
Sbjct: 319 KDVVAMARTGSGKTAAFLIPMFEKLQTHTA---KVGIRALILSPTRELALQTQKFIKELG 375
Query: 676 HTSYVRNTCVFGG 714
+ ++++ + GG
Sbjct: 376 RFTGLKSSVILGG 388
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 45.6 bits (103), Expect = 5e-05
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 15/125 (12%)
Frame = +1
Query: 433 DNGLQRTDAYSSSRLADSYVW-KEFSCVAQTGSGKTLAYILPAIVHIN-------NQPPI 588
D G + S + + ++ ++ A+TGSGKTLA+ +P I HI Q P
Sbjct: 147 DQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQHIEAYKKRKAEQSPS 206
Query: 589 -------RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 747
+G +AL++APTRELA Q++ + V+ + GG +Q R L+
Sbjct: 207 DKESDLESQGYPLLALIMAPTRELALQVKDHLVKAAKYTSVKVAAIVGGMAAPKQQRLLK 266
Query: 748 RGVEI 762
+ EI
Sbjct: 267 QRPEI 271
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 45.2 bits (102), Expect = 6e-05
Identities = 29/77 (37%), Positives = 39/77 (50%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 693
A+TGSGKT A+ LP + + + P G A+VL PTRELA QI G ++
Sbjct: 51 AKTGSGKTAAFALPILQKLCDDPY-----GIFAVVLTPTRELAFQIADQFKVLGRPIGLK 105
Query: 694 NTCVFGGAPKREQARDL 744
+ GG +QA L
Sbjct: 106 EAVIVGGLDMMKQALSL 122
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 44.0 bits (99), Expect = 1e-04
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
K+ +A+TGSGKT A+ LP + + + P AL+L PTRELA QI + G
Sbjct: 2 KDVIGLAETGSGKTGAFALPILQALLDNP-----QRLFALILTPTRELAFQISEQCEALG 56
Query: 676 HTSYVRNTCVFGGAPKREQA 735
V+ + GG QA
Sbjct: 57 SGIGVKCAVIVGGIDMMSQA 76
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +2
Query: 344 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++++A
Sbjct: 121 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMA 176
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/53 (45%), Positives = 28/53 (52%)
Frame = +1
Query: 604 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
P ALVL+PTRELA QIQ+V G V+ GG E R L+ G I
Sbjct: 4 PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHI 56
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 39.1 bits (87), Expect = 0.004
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTRELAQQIQQVAA 666
++ + VA GSGK LAY+LP I I + +GP+ L+L + ++ V
Sbjct: 225 RDVAGVAIEGSGKRLAYLLPIIHQITESSVYQELPLANGPLVLILCTNWQNTARVYGVCE 284
Query: 667 D-FGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
D + R +FGG + ++ L G E+
Sbjct: 285 DLIRNRRRTRVQMIFGGGAEEDRIVPLINGCEV 317
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 38.3 bits (85), Expect = 0.007
Identities = 22/81 (27%), Positives = 37/81 (45%)
Frame = +1
Query: 433 DNGLQRTDAYSSSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 612
+ G + + + ++ A+ G+GKT AY++P + + + A
Sbjct: 64 EKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLERTDTTKNCIQ-----A 118
Query: 613 LVLAPTRELAQQIQQVAADFG 675
LVL PTRELA Q Q+ + G
Sbjct: 119 LVLVPTRELALQTSQICIELG 139
Score = 32.7 bits (71), Expect = 0.36
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA*LKRVPAK 535
FE+ + G+ G+ +P+PIQ + P+A++G++++A K K
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGK 97
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 38.3 bits (85), Expect = 0.007
Identities = 22/81 (27%), Positives = 37/81 (45%)
Frame = +1
Query: 433 DNGLQRTDAYSSSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 612
+ G + + + ++ A+ G+GKT AY++P + + + A
Sbjct: 64 EKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLERTDTTKNCIQ-----A 118
Query: 613 LVLAPTRELAQQIQQVAADFG 675
LVL PTRELA Q Q+ + G
Sbjct: 119 LVLVPTRELALQTSQICIELG 139
Score = 32.7 bits (71), Expect = 0.36
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA*LKRVPAK 535
FE+ + G+ G+ +P+PIQ + P+A++G++++A K K
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGK 97
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 36.7 bits (81), Expect = 0.022
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +1
Query: 424 RCKDNGLQRTDAYSSSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 603
+ K G+ + L + K ++TG+GK+L ++LP++ Q P RG G
Sbjct: 174 KLKKMGITKPVPIQEKALPSVFSHKSLLIKSETGTGKSLVFLLPSV-----QDP-GRGYG 227
Query: 604 PIALVLAPTRELA-QQIQQVAADFGHTSYV 690
I ++ PTRELA Q + +V+ G S V
Sbjct: 228 TI--IVVPTRELASQMLYEVSRLLGDKSIV 255
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 36.7 bits (81), Expect = 0.022
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSYV 690
+Q+G+GKT A++L + ++ P P + L+PT ELA+Q +VA G H ++
Sbjct: 149 SQSGTGKTAAFVLTMLSRVDATKPY-----PQVICLSPTYELARQTGKVAEAMGKHCPHI 203
Query: 691 R-NTCVFGGA-PKREQARD 741
+ N V G P+ ++ D
Sbjct: 204 KINYAVRGNQFPRGQKCTD 222
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +2
Query: 341 HEVTVSGVEVHNPI---QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMS 493
HEV V + +P+ + FEE +++GV MG+ +P+ IQ P+ ++
Sbjct: 86 HEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLA 139
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 36.3 bits (80), Expect = 0.029
Identities = 21/61 (34%), Positives = 34/61 (55%)
Frame = +1
Query: 466 SSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQ 645
+S + + + K+ A TG+GKT A++LP + + +P + LV+ PTRELA
Sbjct: 38 ASTIPVALMGKDVCACAATGTGKTAAFMLPILERLLYRP--TQSPAIRVLVITPTRELAI 95
Query: 646 Q 648
Q
Sbjct: 96 Q 96
Score = 32.7 bits (71), Expect = 0.36
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 422 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
+ V +G+ PTPIQA P+A+ GK++ A
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGKDVCA 52
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 380 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
I FE+ + + + V GYK+PTP+Q PI ++L+A
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMA 917
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPP 585
++ AQTGSGKT A+++P + I + P
Sbjct: 913 RDLMACAQTGSGKTAAFLIPILSRIYMEGP 942
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +2
Query: 365 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 478
++H P++ + FP Y + Y P P QA W
Sbjct: 6 DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSYV 690
A++G+GKT + + A+ ++ I + ++L PTRE+A Q++ V G H +
Sbjct: 57 AKSGTGKTCVFSVIALENV-----ITESNCIQIIILTPTREIAVQVKDVICAIGCHYDGL 111
Query: 691 RNTCVFGGAPKREQARDLE 747
GG E + L+
Sbjct: 112 ACKVFIGGISLEEDKKALK 130
>SB_6554| Best HMM Match : Isy1 (HMM E-Value=0)
Length = 675
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 275 FYDPHPTVLKRSPYEVEEYRNN--HEVTVSGVEVHNPIQYFEEANFPDY 415
+ D VL E EE NN H++ + + +HNP YFE+ + DY
Sbjct: 217 YRDEDDGVLVPIEQEAEEEVNNKLHKILIVNM-IHNPFNYFEKKSPTDY 264
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,916,966
Number of Sequences: 59808
Number of extensions: 512343
Number of successful extensions: 1307
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1289
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2215746665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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