Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021836
         (802 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    55   2e-09
EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.           26   1.2  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    25   2.1  
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    25   3.6  
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    24   6.3  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   8.3  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 55.2 bits (127), Expect = 2e-09
 Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
 Frame = +1

Query: 496 KEFSCVAQTGSGKTLAYILPAIVHI-NNQPPIR-RGDGPIALVLAPTRELAQQIQQVAAD 669
           ++    AQTGSGKT A++LP I H+ + +  +  R   P  +++APTRELA QI      
Sbjct: 212 RDLMACAQTGSGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRK 271

Query: 670 FGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
           F H + ++    +GG   + Q + +  G  +
Sbjct: 272 FAHGTKLKVCVSYGGTAVQHQLQLMRGGCHV 302



 Score = 41.5 bits (93), Expect = 3e-05
 Identities = 19/56 (33%), Positives = 32/56 (57%)
 Frame = +2

Query: 344 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
           +V VSG    + ++ FE +   + V   V+   Y +PTPIQ    PI ++G++L+A
Sbjct: 161 QVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMA 216



 Score = 26.6 bits (56), Expect = 0.89
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +3

Query: 750 GSRNIIATPGRLIDFLE 800
           G   ++ATPGRL+DF++
Sbjct: 299 GCHVLVATPGRLLDFID 315


>EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.
          Length = 452

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +1

Query: 97  TVVPNLEEATNSAIIRLDLATVAVDLEDLEDLVGKKNSLE 216
           T++ +L+E   S +  LDL    +D  +L +L    +SLE
Sbjct: 140 TMLRDLDEGCRSRVQYLDLKLNEIDTVNLAELAASSDSLE 179


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
            protein.
          Length = 988

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 7/45 (15%)
 Frame = -2

Query: 273  FLLKGWMKQNPNL---GDACSDLQRILF----SHQILQILQIYCH 160
            F+ KG ++ +PN    GDA  D++ +LF    S +I   +Q  CH
Sbjct: 926  FVEKGILEGSPNCPECGDAVEDVEHVLFHCPRSDRIRNEMQQRCH 970


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +1

Query: 493 WKEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 603
           +K  +  AQ  + ++   I  A+V +  Q  +RR DG
Sbjct: 456 YKTLNYKAQKAAARSHVKIFKALVRLRKQRTLRRNDG 492


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 17/70 (24%), Positives = 25/70 (35%)
 Frame = +2

Query: 218 SEHASPRLGFCFIQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEE 397
           SE     +    I+P     Y+P P VL  +   V E   + ++ +    V       EE
Sbjct: 97  SEDVESSIPVSTIEPNLVEVYEPPPVVLIDTGNNVVEVNTDDQIVLEDGSVEGESNEQEE 156

Query: 398 ANFPDYVQQG 427
           A    Y   G
Sbjct: 157 AQIDVYHVDG 166


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -2

Query: 270 LLKGWMKQNPNLGDACSDLQRI 205
           LL G MK +P+LG AC  +  +
Sbjct: 406 LLVGRMKVDPDLGAACGRIHPV 427


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 802,001
Number of Sequences: 2352
Number of extensions: 16541
Number of successful extensions: 86
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 85
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)