Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021836
(802 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 115 3e-26
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 91 8e-19
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 87 1e-17
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 79 3e-15
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 75 8e-14
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 63 3e-10
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 63 3e-10
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 63 3e-10
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 58 6e-09
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 58 6e-09
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 58 6e-09
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 52 5e-07
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 52 5e-07
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 52 5e-07
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 52 6e-07
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 52 6e-07
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 52 6e-07
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 51 8e-07
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 51 8e-07
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 51 8e-07
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 51 8e-07
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 50 1e-06
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 50 1e-06
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 48 6e-06
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 48 6e-06
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 47 1e-05
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 46 4e-05
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 46 4e-05
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 44 1e-04
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 44 1e-04
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 43 3e-04
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 42 5e-04
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 42 5e-04
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 38 0.006
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 36 0.034
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 36 0.045
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 35 0.078
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 35 0.078
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 35 0.078
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 34 0.10
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 34 0.14
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 34 0.14
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 33 0.31
AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical... 33 0.31
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 31 0.96
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.9
U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis ... 29 3.9
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 3.9
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 3.9
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 28 6.8
AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine re... 28 6.8
AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine r... 28 8.9
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 115 bits (277), Expect = 3e-26
Identities = 53/89 (59%), Positives = 70/89 (78%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
++ +A+TGSGKTLA++LPA+VHI Q +RG+GP LVL PTRELAQQ+Q+V+ DF
Sbjct: 167 RDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFC 226
Query: 676 HTSYVRNTCVFGGAPKREQARDLERGVEI 762
H+ ++ TC+FGGA K QARDLERGV+I
Sbjct: 227 HSLGLKMTCLFGGASKGPQARDLERGVDI 255
Score = 63.3 bits (147), Expect = 2e-10
Identities = 28/86 (32%), Positives = 53/86 (61%)
Frame = +2
Query: 254 IQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 433
+ P K+FY + V +R YE++++ + ++VT+ G V P+ F EA P + + +
Sbjct: 87 LTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHE-LL 145
Query: 434 TMGYKEPTPIQAQGWPIAMSGKNLVA 511
+++PT IQ+ WPIAMSG+++++
Sbjct: 146 YGKFQKPTVIQSISWPIAMSGRDIIS 171
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 91.1 bits (216), Expect = 8e-19
Identities = 43/84 (51%), Positives = 56/84 (66%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+A+TGSGKTLA++LP HI +QP + GDGPIA++LAPTRELA Q + A F +
Sbjct: 347 IAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGL 406
Query: 691 RNTCVFGGAPKREQARDLERGVEI 762
+ C +GG EQ DL+RG EI
Sbjct: 407 KVACTYGGVGISEQIADLKRGAEI 430
Score = 51.2 bits (117), Expect = 8e-07
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +2
Query: 251 FIQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQG 427
+ + F KNFY + + + EV+ YR + +TV G++ PI+ + + +
Sbjct: 259 YYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNV 318
Query: 428 VKTMGYKEPTPIQAQGWPIAMSGKNLV 508
+K Y +PT IQAQ P MSG++++
Sbjct: 319 LKKFEYSKPTSIQAQAIPSIMSGRDVI 345
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/85 (47%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 690
+A+TGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA Q+ Q A F +
Sbjct: 308 IAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNI 367
Query: 691 RNTCVFGGAPKREQARDLE-RGVEI 762
C +GG K EQ+ +L+ G E+
Sbjct: 368 NPICAYGGGSKWEQSNELQNEGAEM 392
Score = 60.9 bits (141), Expect = 1e-09
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Frame = +2
Query: 257 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 436
Q FNKNFY+ H + + +V +N + V G++ P+ F +F + + ++
Sbjct: 223 QKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRK 282
Query: 437 MGYKEPTPIQAQGWPIAMSGKNLVA*LK----RVPAKRWP 544
Y++PTPIQA P A+SG++++ K + A WP
Sbjct: 283 SEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWP 322
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 79.4 bits (187), Expect = 3e-15
Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 4/88 (4%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFGH 678
VA+TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQI++ FG
Sbjct: 344 VAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGK 403
Query: 679 TSYVRNTCVFGGAPKREQARDLERGVEI 762
++ V GGA + +Q L GVE+
Sbjct: 404 LLGIKTVSVIGGASREDQGMKLRMGVEV 431
Score = 61.3 bits (142), Expect = 8e-10
Identities = 25/60 (41%), Positives = 39/60 (65%)
Frame = +2
Query: 329 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
+R + +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 74.5 bits (175), Expect = 8e-14
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 6/90 (6%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQ-PPIRRGD-----GPIALVLAPTRELAQQIQQVAADF 672
V+QTGSGKTLA++LPA++HI+ Q + D P LVL+PTRELAQQI+ +
Sbjct: 127 VSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKY 186
Query: 673 GHTSYVRNTCVFGGAPKREQARDLERGVEI 762
+ Y ++ C++GG + EQ GVEI
Sbjct: 187 SYNGY-KSVCLYGGGSRPEQVEACRGGVEI 215
Score = 41.9 bits (94), Expect = 5e-04
Identities = 26/96 (27%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Frame = +2
Query: 245 FCFIQPFNKNFYDPHPTVLKRSPYEVEE-YRNNHEVTV------SGVEVHNPIQYFEEAN 403
F +++P ++ Y SP +++E Y N + V S V++ P+ FE+A
Sbjct: 30 FSWMKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAF 89
Query: 404 FPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLV 508
+ G ++ G+++P+PIQ+Q WP+ +SG++ +
Sbjct: 90 GSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCI 125
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 62.9 bits (146), Expect = 3e-10
Identities = 43/97 (44%), Positives = 54/97 (55%), Gaps = 11/97 (11%)
Frame = +1
Query: 505 SCVAQTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQ 654
SC AQTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI
Sbjct: 181 SC-AQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIH 239
Query: 655 QVAADFGHTSYVRNTCVFGGAPK-REQARDLERGVEI 762
+ A F + S ++ ++GG R+Q L G I
Sbjct: 240 KEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHI 276
Score = 44.8 bits (101), Expect = 7e-05
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +2
Query: 338 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L++
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMS 181
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 741 LGEGSRNIIATPGRLIDFLE 800
L G+ +IATPGRLID +E
Sbjct: 270 LRAGTHILIATPGRLIDIIE 289
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 62.9 bits (146), Expect = 3e-10
Identities = 43/97 (44%), Positives = 54/97 (55%), Gaps = 11/97 (11%)
Frame = +1
Query: 505 SCVAQTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQ 654
SC AQTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI
Sbjct: 165 SC-AQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIH 223
Query: 655 QVAADFGHTSYVRNTCVFGGAPK-REQARDLERGVEI 762
+ A F + S ++ ++GG R+Q L G I
Sbjct: 224 KEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHI 260
Score = 44.8 bits (101), Expect = 7e-05
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +2
Query: 338 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L++
Sbjct: 108 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMS 165
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 741 LGEGSRNIIATPGRLIDFLE 800
L G+ +IATPGRLID +E
Sbjct: 254 LRAGTHILIATPGRLIDIIE 273
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 62.9 bits (146), Expect = 3e-10
Identities = 43/97 (44%), Positives = 54/97 (55%), Gaps = 11/97 (11%)
Frame = +1
Query: 505 SCVAQTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQ 654
SC AQTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI
Sbjct: 162 SC-AQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIH 220
Query: 655 QVAADFGHTSYVRNTCVFGGAPK-REQARDLERGVEI 762
+ A F + S ++ ++GG R+Q L G I
Sbjct: 221 KEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHI 257
Score = 44.8 bits (101), Expect = 7e-05
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +2
Query: 338 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L++
Sbjct: 105 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMS 162
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 741 LGEGSRNIIATPGRLIDFLE 800
L G+ +IATPGRLID +E
Sbjct: 251 LRAGTHILIATPGRLIDIIE 270
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 58.4 bits (135), Expect = 6e-09
Identities = 35/108 (32%), Positives = 54/108 (50%)
Frame = +1
Query: 439 GLQRTDAYSSSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 618
G ++ A + K+ AQ+G+GKT + + + I+++ P + ALV
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALV 102
Query: 619 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
+APTRELAQQIQ+V + G V GG R+ R LE G+ +
Sbjct: 103 MAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAGIHV 150
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 58.4 bits (135), Expect = 6e-09
Identities = 35/108 (32%), Positives = 54/108 (50%)
Frame = +1
Query: 439 GLQRTDAYSSSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 618
G ++ A + K+ AQ+G+GKT + + + I+++ P + ALV
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALV 102
Query: 619 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
+APTRELAQQIQ+V + G V GG R+ R LE G+ +
Sbjct: 103 MAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAGIHV 150
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 58.4 bits (135), Expect = 6e-09
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Frame = +1
Query: 511 VAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVAAD---- 669
+A TGSGKT+ ++LP ++ Q P R +GP L++ P+RELA+QI + +
Sbjct: 233 IASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEMFDA 292
Query: 670 FGHTSY--VRNTCVFGGAPKREQARDLERGVEI 762
G +R GG P EQA+D+ G+ I
Sbjct: 293 LGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHI 325
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +2
Query: 284 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 460
P + ++S + E R ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 461 IQAQGWPIAMSGKNLV 508
IQ QG P+A+SG++++
Sbjct: 216 IQIQGIPVALSGRDMI 231
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 52.0 bits (119), Expect = 5e-07
Identities = 30/89 (33%), Positives = 52/89 (58%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
K+ A+TGSGKTLA++LPAI + ++ ++ +G ++++PTREL+ Q V ++
Sbjct: 106 KDVLASAKTGSGKTLAFLLPAI-ELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSELL 164
Query: 676 HTSYVRNTCVFGGAPKREQARDLERGVEI 762
S + V GG+ + + L +GV I
Sbjct: 165 EGSNLTYGLVMGGSNRSAEKDKLAKGVSI 193
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 52.0 bits (119), Expect = 5e-07
Identities = 30/91 (32%), Positives = 49/91 (53%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
K+ +++TGSGKT A+++P + + R G AL+++PTRELA Q +V + G
Sbjct: 62 KDVVAMSRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELG 117
Query: 676 HTSYVRNTCVFGGAPKREQARDLERGVEISL 768
+ +R C+ GG EQ + +I L
Sbjct: 118 RFTGLRCACLVGGDQIEEQFSTIHENPDILL 148
Score = 33.1 bits (72), Expect = 0.24
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 371 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
H +++ V + ++ G+ +PTPIQ + P M GK++VA
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 52.0 bits (119), Expect = 5e-07
Identities = 30/91 (32%), Positives = 49/91 (53%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
K+ +++TGSGKT A+++P + + R G AL+++PTRELA Q +V + G
Sbjct: 62 KDVVAMSRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELG 117
Query: 676 HTSYVRNTCVFGGAPKREQARDLERGVEISL 768
+ +R C+ GG EQ + +I L
Sbjct: 118 RFTGLRCACLVGGDQIEEQFSTIHENPDILL 148
Score = 33.1 bits (72), Expect = 0.24
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 371 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
H +++ V + ++ G+ +PTPIQ + P M GK++VA
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 51.6 bits (118), Expect = 6e-07
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHT 681
AQTGSGKT A++LP + + + + G+G P ++L PTRELA QI F +
Sbjct: 385 AQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQ 444
Query: 682 SYVRNTCVFGGAPKREQARDLERGVEI 762
+ + V+GG +E+G I
Sbjct: 445 TMMEIKPVYGGLAVGYNKGQIEKGATI 471
Score = 36.3 bits (80), Expect = 0.026
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 377 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
P + F EAN + +Q+ V GY + TPIQ P+ G +++A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 51.6 bits (118), Expect = 6e-07
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHT 681
AQTGSGKT A++LP + + + + G+G P ++L PTRELA QI F +
Sbjct: 385 AQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQ 444
Query: 682 SYVRNTCVFGGAPKREQARDLERGVEI 762
+ + V+GG +E+G I
Sbjct: 445 TMMEIKPVYGGLAVGYNKGQIEKGATI 471
Score = 36.3 bits (80), Expect = 0.026
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 377 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
P + F EAN + +Q+ V GY + TPIQ P+ G +++A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 51.6 bits (118), Expect = 6e-07
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHT 681
AQTGSGKT A++LP + + + + G+G P ++L PTRELA QI F +
Sbjct: 385 AQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQ 444
Query: 682 SYVRNTCVFGGAPKREQARDLERGVEI 762
+ + V+GG +E+G I
Sbjct: 445 TMMEIKPVYGGLAVGYNKGQIEKGATI 471
Score = 36.3 bits (80), Expect = 0.026
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 377 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
P + F EAN + +Q+ V GY + TPIQ P+ G +++A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 51.2 bits (117), Expect = 8e-07
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 678
A+T +GKT A+ LP I I + R+ DGP+AL+LAPTRELA QI + +
Sbjct: 425 AETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHEALRTYCQ 484
Query: 679 TSYVRNTCVFGGAPKREQARDLERGVEI 762
+ + +G + + ++ G +I
Sbjct: 485 NTDIIVLLSYGQSDRARSLNEIRNGCDI 512
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 51.2 bits (117), Expect = 8e-07
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHT 681
AQTGSGKT A++LP + + ++ + G+G P ++L PTREL QI F +
Sbjct: 596 AQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQ 655
Query: 682 SYVRNTCVFGGAPKREQARDLERGVEI 762
+ + V+GG +E+G I
Sbjct: 656 TMMEIRPVYGGLAVGYNKGQIEKGATI 682
Score = 31.5 bits (68), Expect = 0.73
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
F EAN + +++ V GY + TPIQ P+ G +++A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 51.2 bits (117), Expect = 8e-07
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHT 681
AQTGSGKT A++LP + + ++ + G+G P ++L PTREL QI F +
Sbjct: 596 AQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQ 655
Query: 682 SYVRNTCVFGGAPKREQARDLERGVEI 762
+ + V+GG +E+G I
Sbjct: 656 TMMEIRPVYGGLAVGYNKGQIEKGATI 682
Score = 31.5 bits (68), Expect = 0.73
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
F EAN + +++ V GY + TPIQ P+ G +++A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 51.2 bits (117), Expect = 8e-07
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHT 681
AQTGSGKT A++LP + + ++ + G+G P ++L PTREL QI F +
Sbjct: 596 AQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQ 655
Query: 682 SYVRNTCVFGGAPKREQARDLERGVEI 762
+ + V+GG +E+G I
Sbjct: 656 TMMEIRPVYGGLAVGYNKGQIEKGATI 682
Score = 31.5 bits (68), Expect = 0.73
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
F EAN + +++ V GY + TPIQ P+ G +++A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVA 663
K+ AQTGSGKT A++LP + + + + G +G P ++L PTRELA QI
Sbjct: 336 KDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEG 395
Query: 664 ADFGHTSYVRNTCVFGG 714
F + S + V+GG
Sbjct: 396 RKFSYQSVMEIKPVYGG 412
Score = 35.9 bits (79), Expect = 0.034
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2
Query: 377 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
P + F +++ P +++ V+ GY TPIQ P+ GK+++A
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVA 663
K+ AQTGSGKT A++LP + + + + G +G P ++L PTRELA QI
Sbjct: 336 KDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEG 395
Query: 664 ADFGHTSYVRNTCVFGG 714
F + S + V+GG
Sbjct: 396 RKFSYQSVMEIKPVYGG 412
Score = 35.9 bits (79), Expect = 0.034
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2
Query: 377 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
P + F +++ P +++ V+ GY TPIQ P+ GK+++A
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 48.4 bits (110), Expect = 6e-06
Identities = 29/77 (37%), Positives = 43/77 (55%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 693
A+TG+GKTLA+ +P + ++ P G AL+L PTRELA QI + G ++
Sbjct: 133 ARTGTGKTLAFAIPILQKLSVDPY-----GIYALILTPTRELAFQIAEQFTALGKPITLK 187
Query: 694 NTCVFGGAPKREQARDL 744
+ + GG QAR+L
Sbjct: 188 CSVIVGGRSLIHQAREL 204
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 48.4 bits (110), Expect = 6e-06
Identities = 29/77 (37%), Positives = 43/77 (55%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 693
A+TG+GKTLA+ +P + ++ P G AL+L PTRELA QI + G ++
Sbjct: 133 ARTGTGKTLAFAIPILQKLSVDPY-----GIYALILTPTRELAFQIAEQFTALGKPITLK 187
Query: 694 NTCVFGGAPKREQARDL 744
+ + GG QAR+L
Sbjct: 188 CSVIVGGRSLIHQAREL 204
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 47.2 bits (107), Expect = 1e-05
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Frame = +1
Query: 505 SCVAQTGSGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTRELAQQI 651
SC AQTGSGKT A+++P + I P R+ P ALVL+PTREL+ QI
Sbjct: 208 SC-AQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQI 266
Query: 652 QQVAADFGHTSYVRNTCVFGGAPK-REQARDLERGVEI 762
+ F + + + + ++GG ++Q L G I
Sbjct: 267 FNESRKFAYRTPITSALLYGGRENYKDQIHKLRLGCHI 304
Score = 46.0 bits (104), Expect = 3e-05
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +2
Query: 347 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
V +G +V PI F + + +++++ +KT GY PTP+Q P G++L++
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMS 208
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 45.6 bits (103), Expect = 4e-05
Identities = 29/83 (34%), Positives = 43/83 (51%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 693
AQ+G+GKT + + + ++ Q +R AL+L+PTRELA QIQ+V G V+
Sbjct: 70 AQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNVQ 124
Query: 694 NTCVFGGAPKREQARDLERGVEI 762
GG E R L+ G +
Sbjct: 125 CHACIGGTNLGEDIRKLDYGQHV 147
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 45.6 bits (103), Expect = 4e-05
Identities = 29/83 (34%), Positives = 43/83 (51%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 693
AQ+G+GKT + + + ++ Q +R AL+L+PTRELA QIQ+V G V+
Sbjct: 70 AQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNVQ 124
Query: 694 NTCVFGGAPKREQARDLERGVEI 762
GG E R L+ G +
Sbjct: 125 CHACIGGTNLGEDIRKLDYGQHV 147
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 44.4 bits (100), Expect = 1e-04
Identities = 33/108 (30%), Positives = 47/108 (43%)
Frame = +1
Query: 427 CKDNGLQRTDAYSSSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP 606
C+ G + + L + K+ +A+TGSGKT A+ +P + + + P
Sbjct: 59 CQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHP-----QAF 113
Query: 607 IALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER 750
LVL PTRELA QI Q G + + GG QA L R
Sbjct: 114 FCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAMALAR 161
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 44.4 bits (100), Expect = 1e-04
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
A+TGSGKTLA+ +P + + + + GP AL++APTREL QI +
Sbjct: 33 AETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALI 92
Query: 676 HTSYVRNTCVFGGAPKREQAR 738
T+ + T + GG + +Q R
Sbjct: 93 STTQLIATSIVGGLAQVKQER 113
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 44.4 bits (100), Expect = 1e-04
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
A+TGSGKTLA+ +P + + + + GP AL++APTREL QI +
Sbjct: 200 AETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALI 259
Query: 676 HTSYVRNTCVFGGAPKREQAR 738
T+ + T + GG + +Q R
Sbjct: 260 STTQLIATSIVGGLAQVKQER 280
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 44.4 bits (100), Expect = 1e-04
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRG-----DGPIALVLAPTRELAQQIQQVAADFGH 678
A TGSGKTLA+++P ++ + + R P L++APTREL Q A +
Sbjct: 780 AHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTY 839
Query: 679 TSYVRNTCVFGGAPKREQARDLERGVEISLLL 774
+ ++ FGG + + L ++++L+
Sbjct: 840 ETGLKCGLAFGGYSRNANVQHLRSFSQLNILV 871
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 44.4 bits (100), Expect = 1e-04
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRG-----DGPIALVLAPTRELAQQIQQVAADFGH 678
A TGSGKTLA+++P ++ + + R P L++APTREL Q A +
Sbjct: 780 AHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTY 839
Query: 679 TSYVRNTCVFGGAPKREQARDLERGVEISLLL 774
+ ++ FGG + + L ++++L+
Sbjct: 840 ETGLKCGLAFGGYSRNANVQHLRSFSQLNILV 871
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 42.7 bits (96), Expect = 3e-04
Identities = 28/89 (31%), Positives = 41/89 (46%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
K+ A TG+GKT A++LP + + +P + LVL PTRELA Q+ QV
Sbjct: 186 KDICACAATGTGKTAAFVLPILERMIYRP--KGASCTRVLVLVPTRELAIQVFQVFRKLS 243
Query: 676 HTSYVRNTCVFGGAPKREQARDLERGVEI 762
+ GG + Q L G ++
Sbjct: 244 TFIQLEVCLCAGGLDLKAQEAALRSGPDV 272
Score = 36.7 bits (81), Expect = 0.019
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
FE+ N + + GY +PTPIQ P+A++GK++ A
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICA 190
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/65 (41%), Positives = 34/65 (52%)
Frame = +1
Query: 520 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 699
TGSGKTLA++LP + I N G AL+L+P+REL QI V F +
Sbjct: 55 TGSGKTLAFVLPMMRMIQNAKLQPADIG--ALILSPSRELCSQIVSVIQPFAEKLNLTVE 112
Query: 700 CVFGG 714
V GG
Sbjct: 113 TVTGG 117
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/50 (40%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQV 660
A+TGSGKT A+++P + + + G GP A+++APT+EL QI ++
Sbjct: 133 ARTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSAVIIAPTKELITQIYKL 182
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 41.9 bits (94), Expect = 5e-04
Identities = 28/110 (25%), Positives = 49/110 (44%)
Frame = +1
Query: 433 DNGLQRTDAYSSSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 612
+ G ++ + + + ++ A+ G+GKT AY +P I I QP ++ A
Sbjct: 60 EKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKI--QPALKAIQ---A 114
Query: 613 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 762
+V+ PTRELA Q Q+ + ++ GG R+ L V +
Sbjct: 115 MVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIMRLNGTVHL 164
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 38.3 bits (85), Expect = 0.006
Identities = 25/73 (34%), Positives = 37/73 (50%)
Frame = +1
Query: 430 KDNGLQRTDAYSSSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 609
KDN + +A S + A+TGSGKTLA ++P ++ + G
Sbjct: 92 KDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIP-VLEALWRAKWSPDYGLG 150
Query: 610 ALVLAPTRELAQQ 648
AL+++PTRELA Q
Sbjct: 151 ALIISPTRELALQ 163
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 35.9 bits (79), Expect = 0.034
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +1
Query: 496 KEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
++ + A TGSGKT+ Y+LP + + ++P A++L P + L QI +
Sbjct: 157 RDVAIAAPTGSGKTICYVLPVLAAVGSKP----SKILQAVILVPVQTLVAQIVDEFKRWN 212
Query: 676 HTSYVRNTCVFGGAPKRE-QARDL 744
S V GA E +AR L
Sbjct: 213 DESGVAKVVSLSGANDFEKEARQL 236
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 35.5 bits (78), Expect = 0.045
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = +1
Query: 514 AQTGSGKTLAYILPA---IVHINNQPPIRRGDGP--IALVLAPTRELAQQ 648
A TGSGKTLA+ LP I+ + + + +A+VL PTRELA Q
Sbjct: 170 APTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 34.7 bits (76), Expect = 0.078
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
AQ+G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 255 AQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 303
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 34.7 bits (76), Expect = 0.078
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
AQ+G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 280 AQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 328
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 34.7 bits (76), Expect = 0.078
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
AQ+G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 664 AQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 712
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 34.3 bits (75), Expect = 0.10
Identities = 22/89 (24%), Positives = 41/89 (46%)
Frame = +1
Query: 439 GLQRTDAYSSSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 618
G ++ A S +A K+ + +Q GSGKT+ ++ + I+ + + ++
Sbjct: 15 GFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQ-----VIL 69
Query: 619 LAPTRELAQQIQQVAADFGHTSYVRNTCV 705
LAP R +AQ+ + G V TC+
Sbjct: 70 LAPQRGMAQRAHEQLKSLGRNLNVNATCL 98
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/109 (21%), Positives = 52/109 (47%)
Frame = +1
Query: 424 RCKDNGLQRTDAYSSSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 603
R K++ R + + + ++ A++G+GKTL + + A+ ++++ R
Sbjct: 36 RLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDS-----RSSH 90
Query: 604 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER 750
+++ PTRE++ QI++ T R + GG+ + DL++
Sbjct: 91 IQKVIVTPTREISVQIKETVRKVAPTG-ARTSVYVGGSAHKLNLIDLKQ 138
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/109 (21%), Positives = 52/109 (47%)
Frame = +1
Query: 424 RCKDNGLQRTDAYSSSRLADSYVWKEFSCVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 603
R K++ R + + + ++ A++G+GKTL + + A+ ++++ R
Sbjct: 36 RLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDS-----RSSH 90
Query: 604 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER 750
+++ PTRE++ QI++ T R + GG+ + DL++
Sbjct: 91 IQKVIVTPTREISVQIKETVRKVAPTG-ARTSVYVGGSAHKLNLIDLKQ 138
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 32.7 bits (71), Expect = 0.31
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = +1
Query: 514 AQTGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTRELAQQI 651
A TG GKT A+++PAI + + +P I P L+LA T L +Q+
Sbjct: 136 APTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQL 185
>AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical
protein Y71F9B.14 protein.
Length = 430
Score = 32.7 bits (71), Expect = 0.31
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -1
Query: 748 SPSPGLALF*EHHQTHTCYEHKMCVQNLQQLAEFVVL 638
+P PGL L +HH +HT +H +C+Q + A VL
Sbjct: 18 NPKPGLILG-DHHISHTINQHHLCIQKKRLKAGTTVL 53
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 31.1 bits (67), Expect = 0.96
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +1
Query: 91 VETVVPNLEEATNSAIIRLDLATVAVDLEDLEDLVGKKN 207
+ETV+ LE N +RL+ A VA E LE + GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 520 TGSGKTLAYILPAIVH 567
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis
zeste white 10 (drosophila) homolog protein 1 protein.
Length = 778
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 653 SKLLQILDTHLMFVTRVCLVVLLKESK 733
+KLL LDT +FVTR C ++ K +K
Sbjct: 372 AKLLFTLDTDTIFVTRRCFAIVSKANK 398
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -1
Query: 502 ILSRHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLF 323
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+++F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 322 D 320
+
Sbjct: 86 N 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -1
Query: 502 ILSRHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLF 323
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+++F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 322 D 320
+
Sbjct: 86 N 86
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 143 RIIAEFVASSKFGTTVSTAIIPV 75
++I +FVA S G T+STA P+
Sbjct: 221 QLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 143 RIIAEFVASSKFGTTVSTAIIPV 75
++I +FVA S G T+STA P+
Sbjct: 130 QLIGDFVAGSLLGATISTAFFPL 152
>AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine
receptor, class t protein53 protein.
Length = 318
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/75 (25%), Positives = 34/75 (45%)
Frame = -1
Query: 493 RHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLFDFI 314
R S+RP + +R+ F+ L L+H+ I + +M +L IIS ++
Sbjct: 224 RKSFRPKRTARQRQIFLQAFLLCLIHLSASILYV-----VMQFIEVPKFLTIIS---QYL 275
Query: 313 W*SFENCRMWIIKVF 269
W + C + I +F
Sbjct: 276 WQLAQGCPVIIYLIF 290
>AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 12 protein.
Length = 341
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -2
Query: 219 DLQRILFSHQILQILQIYCHRCQIETN-YR-RICCL 118
D +S I QI+ +CH+ +++TN +R RI CL
Sbjct: 268 DASIFFYSFAIPQIMTCFCHKWKVQTNTFRIRIGCL 303
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,706,618
Number of Sequences: 27780
Number of extensions: 382170
Number of successful extensions: 1133
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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