Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021835
         (831 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    25   0.97 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.2  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   2.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   6.9  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   9.1  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   9.1  

>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 24.6 bits (51), Expect = 0.97
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 669 AKYHCCVCFFFNIL*QKVHWQTRSNSCYII 758
           A   C V   F+I  Q   W+T+ N+C +I
Sbjct: 70  ASVRCPVGLAFDIERQTCDWKTKVNNCDVI 99


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 239 RFRLQSGYCISSSCNLSVVISFMT 310
           +FRLQ GY +   C L   I  M+
Sbjct: 190 KFRLQEGYHVPELCELLDAIHVMS 213


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = -1

Query: 327 KKSLFSVIKEITTERLQEDDIQYPDCSRKRMNPNITATYLRNHFQDNIILL 175
           K S  S  ++ TTE  +   IQ  D ++ R+N ++T TY +   +   ILL
Sbjct: 312 KPSSSSNQEKTTTESAKISVIQ--DDAQMRLNKHVTTTYPKQPLRFGKILL 360


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 7/27 (25%), Positives = 17/27 (62%)
 Frame = +2

Query: 2   FFFFFFHLNPTIYFYYHPKITLTLIIL 82
           +F++ F +   +Y++Y+  I  T+ +L
Sbjct: 102 YFYYAFIILLCVYYFYYAFIIFTVHLL 128


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 598 IKRAYVCFLIFISMMDCEQIERRVPLV*NY 509
           + + +VC L  I + DC   E +  LV  Y
Sbjct: 260 VGKNFVCLLSLIILCDCVVKEAQKSLVLTY 289


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 763 LNGK*RYPDLFL 798
           L GK RYPD+F+
Sbjct: 87  LFGKTRYPDIFM 98


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,991
Number of Sequences: 336
Number of extensions: 4180
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22829180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)