Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021835
         (831 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3472|AAS65085.1|  558|Drosophila melanogaster CG33486-P...    88   1e-17
AY058298-1|AAL13527.1|  659|Drosophila melanogaster GH05975p pro...    31   2.6  
AE014134-1092|AAF52383.2|  659|Drosophila melanogaster CG9528-PA...    31   2.6  

>AE014296-3472|AAS65085.1|  558|Drosophila melanogaster CG33486-PA
           protein.
          Length = 558

 Score = 88.2 bits (209), Expect = 1e-17
 Identities = 42/88 (47%), Positives = 60/88 (68%)
 Frame = -2

Query: 761 SYDITTIRASLPMYLLSKYIKEKTDTTVVFSGEGADELAQGYIYFRDAPSEKDAHKESVR 582
           +YD+TT+R SLPM LL++YIK  T   ++ SGEGADE+  GY+YF  APS  D H+E V+
Sbjct: 323 TYDVTTVRCSLPMLLLARYIKS-TGIKMILSGEGADEIFGGYLYFHKAPSYNDFHEELVK 381

Query: 581 LLSDIYLYDGLRADRTTSAFSLELQYRF 498
            +  ++L D LRA++   A  +EL+  F
Sbjct: 382 RVRQLHLSDCLRANKVAMAKGVELRVPF 409



 Score = 53.2 bits (122), Expect = 4e-07
 Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 10/69 (14%)
 Frame = -1

Query: 513 ITVPFLDIQFTHHYLSIPPKLRQP----------QNGVEKHLLRSSFAKSGLLPDCVLWR 364
           + VPFLD  F +H + I P+ + P          Q  +EK++LR++FA +  LPD VLWR
Sbjct: 405 LRVPFLDTGFVNHVMQIRPEDKIPGPLNKFGEVQQKRLEKYVLRAAFADN-YLPDEVLWR 463

Query: 363 HKEAFSDGV 337
            KE FSDGV
Sbjct: 464 QKEQFSDGV 472



 Score = 35.5 bits (78), Expect = 0.090
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = -3

Query: 247 PKTNESKYYRYVFEKSFPGQHNF-TPYYWMPK--WVQVSDPSAR 125
           P T E+ YYR +F + FPG+    T   W+P+  W    DPS R
Sbjct: 505 PTTKEAFYYRCIFAEQFPGESAARTVVRWVPRLDWGCPEDPSGR 548


>AY058298-1|AAL13527.1|  659|Drosophila melanogaster GH05975p
           protein.
          Length = 659

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = -2

Query: 758 YDITTIRASLPMYLLSKYIKEKTDTTVVFSGEGADELAQGYIYFRDAPSEKDAHKESVR 582
           +D+        +Y +++ + EK D+ V +      +  +G  YFR+ P+    HKESV+
Sbjct: 544 FDVMRNDLHFTLYRVTQELPEKNDSAVSYFD--LQDFVEGVNYFREEPTLICRHKESVQ 600


>AE014134-1092|AAF52383.2|  659|Drosophila melanogaster CG9528-PA
           protein.
          Length = 659

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = -2

Query: 758 YDITTIRASLPMYLLSKYIKEKTDTTVVFSGEGADELAQGYIYFRDAPSEKDAHKESVR 582
           +D+        +Y +++ + EK D+ V +      +  +G  YFR+ P+    HKESV+
Sbjct: 544 FDVMRNDLHFTLYRVTQELPEKNDSAVSYFD--LQDFVEGVNYFREEPTLICRHKESVQ 600


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,191,847
Number of Sequences: 53049
Number of extensions: 684527
Number of successful extensions: 1867
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1866
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)