Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021833
         (845 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   7.0  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   7.0  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    21   9.3  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.3  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    21   9.3  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
          protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -1

Query: 86 PYICRHLIHS 57
          PY+C H+I+S
Sbjct: 50 PYLCTHIIYS 59


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = +3

Query: 282 EFEKSMKSNHEIQHENDKKQAELFKAESQD 371
           ++EK  K  HE   ++D    ++  +E+Q+
Sbjct: 275 KYEKIDKEEHESMDDDDDDDDDMSNSENQN 304


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 644 SELQIKFISNAPCGFYKYKYPSEMNGK 724
           +EL+ K+    P G YK KY  E+  +
Sbjct: 100 NELEAKY---DPTGIYKNKYADELKAE 123


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +1

Query: 481 KVTKHQQNGVTTTSSSCDTTEIRK*FKDITSSGALAGG 594
           KV K + +G     SS + TE +    D+T S   +GG
Sbjct: 19  KVFKDEGDGEDEKRSSENLTEEKSSLIDLTESEEKSGG 56


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 644 SELQIKFISNAPCGFYKYKYPSEMNGK 724
           +EL+ K+    P G YK KY  E+  +
Sbjct: 100 NELEAKY---DPTGIYKNKYADELKAE 123


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,914
Number of Sequences: 336
Number of extensions: 3856
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23348025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)