Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021833
(845 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82053-2|CAB04835.1| 365|Caenorhabditis elegans Hypothetical pr... 32 0.59
U53151-1|AAB37069.1| 226|Caenorhabditis elegans Clathrin light ... 31 1.0
Z74045-1|CAA98552.1| 535|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 29 3.1
AL117204-9|CAB55124.1| 358|Caenorhabditis elegans Hypothetical ... 29 3.1
Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical p... 29 4.2
Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical pr... 29 4.2
U28409-1|AAC46592.3| 231|Caenorhabditis elegans Hypothetical pr... 29 4.2
AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical ... 29 4.2
AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical ... 29 4.2
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p... 29 5.5
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr... 29 5.5
AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical ... 29 5.5
Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z78019-7|CAB01454.2| 547|Caenorhabditis elegans Hypothetical pr... 28 9.6
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 28 9.6
AC024828-1|AAF60808.2| 419|Caenorhabditis elegans Hypothetical ... 28 9.6
>Z82053-2|CAB04835.1| 365|Caenorhabditis elegans Hypothetical
protein T26E3.2 protein.
Length = 365
Score = 31.9 bits (69), Expect = 0.59
Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +2
Query: 521 LVLVTQRKLGNDSKTLLPQGHWQEGETLRQTAERIVKEQIG---SELQIKFISNAPCGFY 691
++L+ + K K +P G + GET+ + R VKE+ G +++ + G+Y
Sbjct: 90 VLLIQEAKKSCRGKWYMPAGRVEAGETIEEAVVREVKEETGYSCDVVELLSLQVQGSGWY 149
Query: 692 KYKYPSEMNG 721
+Y + + G
Sbjct: 150 RYAFYCNITG 159
>U53151-1|AAB37069.1| 226|Caenorhabditis elegans Clathrin light
chain protein 1 protein.
Length = 226
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +3
Query: 246 NAKKYKEFLLTVEFEKSMKSNHEIQHENDKKQAELF-KAESQDVDIDAVNKVTAQDFEDA 422
NAKK E + EK+++ +H+ +N+K ELF K + D + VNK+ Q +
Sbjct: 149 NAKKELEEWYK-QREKTLQLSHDENLKNEKSNQELFAKQQDGDAQWETVNKLVDQQ-KSK 206
Query: 423 ANEEYSKFK 449
+ ++ S+ K
Sbjct: 207 SGKDLSRLK 215
>Z74045-1|CAA98552.1| 535|Caenorhabditis elegans Hypothetical
protein T27F2.1 protein.
Length = 535
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 596 ETLRQTAERIVKEQIGSELQIKFISN-APCGFYKYKYPSEMNGKVGAK 736
E R E+IV ++ S L ++ AP + +Y PS+ NG G++
Sbjct: 150 EKTRMALEKIVNSKVASALPVRHADKLAPAQYIRYT-PSQQNGAAGSQ 196
>Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical
protein ZC302.2a protein.
Length = 501
Score = 29.5 bits (63), Expect = 3.1
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 184 WDILTGICIERLPVVTPPLTEMQKN 258
WD TG+C++ +P + P+T + N
Sbjct: 324 WDFKTGLCVKCIPAHSDPITSISYN 348
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 184 WDILTGICIERLPVVTPPLTEMQKN 258
WD+ TG+CI+ LP + P++ + N
Sbjct: 198 WDVKTGMCIKTLPAHSDPVSAVSFN 222
>AL117204-9|CAB55124.1| 358|Caenorhabditis elegans Hypothetical
protein Y116A8C.18 protein.
Length = 358
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/76 (27%), Positives = 34/76 (44%)
Frame = +3
Query: 282 EFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGNL 461
+ + ++S ++ E +K AEL K+ + + K T FEDA + + N
Sbjct: 207 KLHEEVQSERLLKSEVAEKLAELIKSVKTSNSM-LLEKTT--QFEDAQGSRENVVEGAND 263
Query: 462 ETDADKKGDKTSTERC 509
E D D+T TE C
Sbjct: 264 EMDTSFASDETRTENC 279
>Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical protein
T06D8.1b protein.
Length = 3653
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/79 (24%), Positives = 31/79 (39%)
Frame = +3
Query: 282 EFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGNL 461
E E + + + K++A K Q+VD D++ K F+ EE +K
Sbjct: 860 ETETPLSEGEKTTTSSPKEEAATLKTIGQEVDDDSLLKGCIVHFQSQPIEERNKEFTAPF 919
Query: 462 ETDADKKGDKTSTERCYND 518
E + + RCY D
Sbjct: 920 ELNLKVPTAEICAHRCYQD 938
>Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical protein
T06D8.1a protein.
Length = 3719
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/79 (24%), Positives = 31/79 (39%)
Frame = +3
Query: 282 EFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGNL 461
E E + + + K++A K Q+VD D++ K F+ EE +K
Sbjct: 860 ETETPLSEGEKTTTSSPKEEAATLKTIGQEVDDDSLLKGCIVHFQSQPIEERNKEFTAPF 919
Query: 462 ETDADKKGDKTSTERCYND 518
E + + RCY D
Sbjct: 920 ELNLKVPTAEICAHRCYQD 938
>Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/79 (24%), Positives = 31/79 (39%)
Frame = +3
Query: 282 EFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGNL 461
E E + + + K++A K Q+VD D++ K F+ EE +K
Sbjct: 860 ETETPLSEGEKTTTSSPKEEAATLKTIGQEVDDDSLLKGCIVHFQSQPIEERNKEFTAPF 919
Query: 462 ETDADKKGDKTSTERCYND 518
E + + RCY D
Sbjct: 920 ELNLKVPTAEICAHRCYQD 938
>Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical protein
T06D8.1a protein.
Length = 3719
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/79 (24%), Positives = 31/79 (39%)
Frame = +3
Query: 282 EFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGNL 461
E E + + + K++A K Q+VD D++ K F+ EE +K
Sbjct: 860 ETETPLSEGEKTTTSSPKEEAATLKTIGQEVDDDSLLKGCIVHFQSQPIEERNKEFTAPF 919
Query: 462 ETDADKKGDKTSTERCYND 518
E + + RCY D
Sbjct: 920 ELNLKVPTAEICAHRCYQD 938
>U28409-1|AAC46592.3| 231|Caenorhabditis elegans Hypothetical
protein T25D10.2 protein.
Length = 231
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 267 FLLTVEFEKSMKSNHEIQHENDKKQAELFKAESQDVD 377
FL+ + +K + N+ Q END K E+F+ + VD
Sbjct: 91 FLVIFDVQKEDEGNYYCQRENDSKWGEVFQLKIAYVD 127
>AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/79 (24%), Positives = 31/79 (39%)
Frame = +3
Query: 282 EFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGNL 461
E E + + + K++A K Q+VD D++ K F+ EE +K
Sbjct: 860 ETETPLSEGEKTTTSSPKEEAATLKTIGQEVDDDSLLKGCIVHFQSQPIEERNKEFTAPF 919
Query: 462 ETDADKKGDKTSTERCYND 518
E + + RCY D
Sbjct: 920 ELNLKVPTAEICAHRCYQD 938
>AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/79 (24%), Positives = 31/79 (39%)
Frame = +3
Query: 282 EFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGNL 461
E E + + + K++A K Q+VD D++ K F+ EE +K
Sbjct: 860 ETETPLSEGEKTTTSSPKEEAATLKTIGQEVDDDSLLKGCIVHFQSQPIEERNKEFTAPF 919
Query: 462 ETDADKKGDKTSTERCYND 518
E + + RCY D
Sbjct: 920 ELNLKVPTAEICAHRCYQD 938
>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Frame = +3
Query: 288 EKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANE----EYSKFKFG 455
EK+ K + + E + L + + D+ + + T+ +D N EY +
Sbjct: 201 EKTDKEKLDAEKEKALAEKRLEREQKLYKDLKSSSDDTSSSIDDKMNFDDEIEYLEEMLD 260
Query: 456 NLETDADKKGDKTSTE 503
N+E D+KG K TE
Sbjct: 261 NIEKQKDRKGSKDETE 276
>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Frame = +3
Query: 288 EKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANE----EYSKFKFG 455
EK+ K + + E + L + + D+ + + T+ +D N EY +
Sbjct: 201 EKTDKEKLDAEKEKALAEKRLEREQKLYKDLKSSSDDTSSSIDDKMNFDDEIEYLEEMLD 260
Query: 456 NLETDADKKGDKTSTE 503
N+E D+KG K TE
Sbjct: 261 NIEKQKDRKGSKDETE 276
>AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical
protein Y40C7B.1 protein.
Length = 916
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/75 (21%), Positives = 34/75 (45%)
Frame = +3
Query: 294 SMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGNLETDA 473
++ + E+Q + K+Q E ++ + + + K Q+ E NE++ K L+ +
Sbjct: 193 AISTREELQQQRHKQQLEEYEKRKEILRREEEIKQQNQEREKQINEDFEKRNQEKLKREE 252
Query: 474 DKKGDKTSTERCYND 518
+ K E+ ND
Sbjct: 253 EIKQQNQEREKQIND 267
>Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical
protein C47E8.5 protein.
Length = 702
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +3
Query: 288 EKSMKSNHEIQHENDKKQAELFKAES-QDVDIDAVNKVTAQDFEDAANEEYSKFKFGNLE 464
EK + + DKK+ + K + +D +++ + ++ +D +NEEY++F + +L
Sbjct: 230 EKKEGEVENVADDADKKKTKKIKEKYFEDEELNKTKPIWTRNPDDISNEEYAEF-YKSLS 288
Query: 465 TD 470
D
Sbjct: 289 ND 290
>Z78019-7|CAB01454.2| 547|Caenorhabditis elegans Hypothetical
protein ZK863.3 protein.
Length = 547
Score = 27.9 bits (59), Expect = 9.6
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +2
Query: 554 DSKTLLPQGHWQEGETLRQTAERIVKEQIGSELQIKFISNAPCGFYKYKYPSEMNGKVGA 733
D K QG+ G L + AERI +E+ GS+ +I IS Y K E++G +
Sbjct: 484 DPKKFQHQGY---GSLLMEEAERIAREEHGSD-KIAVISGVGTREYYRKLGYELDGPYMS 539
Query: 734 KI 739
K+
Sbjct: 540 KM 541
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = +3
Query: 288 EKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGNLET 467
+K K + ++END+K+ + + ++ D K +D + NEE K K +
Sbjct: 92 KKEDKKEDKKENENDEKKEKSKDDKKEESKEDKKEKTKTED-NEGKNEEKKKEKKEEKKD 150
Query: 468 DADKKGDKTSTER 506
+ +KK +KT ++
Sbjct: 151 EKEKK-EKTEDDK 162
>AC024828-1|AAF60808.2| 419|Caenorhabditis elegans Hypothetical
protein Y55F3BL.1 protein.
Length = 419
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 611 TAERIVKEQIGSELQIKFISNAPCGFYKYKYPSEMN 718
TAER + E G++L NAP G + ++ S N
Sbjct: 70 TAERCIGELSGTDLSADISGNAPFGVFTHRQFSNKN 105
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,199,338
Number of Sequences: 27780
Number of extensions: 348222
Number of successful extensions: 1152
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -