Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021833
(845 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g06340.1 68418.m00710 diadenosine 5',5'''-P1,P4-tetraphosphat... 36 0.045
At3g52525.1 68416.m05776 ovate protein, putative 83% similar to ... 32 0.55
At1g14620.1 68414.m01738 expressed protein 31 1.3
At3g10620.1 68416.m01277 diadenosine 5',5'''-P1,P4-tetraphosphat... 30 2.2
At2g02660.1 68415.m00205 hypothetical protein 30 2.2
At1g68760.1 68414.m07860 MutT/nudix family protein similar to SP... 30 2.2
At4g30590.1 68417.m04340 plastocyanin-like domain-containing pro... 29 3.9
At4g24230.2 68417.m03478 acyl-CoA binding protein, putative / AC... 29 3.9
At4g24230.1 68417.m03477 acyl-CoA binding protein, putative / AC... 29 3.9
At3g12600.1 68416.m01569 MutT/nudix family protein contains Pfam... 29 3.9
At1g30110.1 68414.m03680 diadenosine 5',5'''-P1,P4-tetraphosphat... 29 3.9
At2g42190.1 68415.m05221 expressed protein ; similar to GP|9826|... 29 5.1
At1g22060.1 68414.m02759 expressed protein 29 5.1
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 28 6.8
At1g09415.1 68414.m01053 NPR1/NIM1-interacting protein 3 (NIMIN-... 28 6.8
At5g26350.1 68418.m03150 hypothetical protein 28 9.0
At3g28770.1 68416.m03591 expressed protein 28 9.0
At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family... 28 9.0
At1g63205.1 68414.m07143 hypothetical protein 28 9.0
>At5g06340.1 68418.m00710 diadenosine 5',5'''-P1,P4-tetraphosphate
hydrolase, putative similar to diadenosine
5',5'''-P1,P4-tetraphosphate hydrolase from [Lupinus
angustifolius] GI:1888557, [Hordeum vulgare subsp.
vulgare] GI:2564253; contains Pfam profile PF00293:
NUDIX domain
Length = 227
Score = 35.5 bits (78), Expect = 0.045
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +2
Query: 569 LPQGHWQEGETLRQTAERIVKEQIGSELQIKFISNAPCGFYKYKYPSEMNGKVGAK 736
+PQG EGE LR A R ++E+ G +FI+ P + Y +P E+ K+ K
Sbjct: 91 MPQGGADEGEDLRNAAFRELREETG-VTSAEFIAEIP-NWLTYDFPREVKDKLNRK 144
>At3g52525.1 68416.m05776 ovate protein, putative 83% similar to
ovate protein (GI:23429649) [Lycopersicon esculentum];
contains TIGRFAM TIGR01568 : uncharacterized
plant-specific domain TIGR01568
Length = 159
Score = 31.9 bits (69), Expect = 0.55
Identities = 15/68 (22%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +1
Query: 79 IYGKLFIKMLVKTLMRMNITYYHRLLIRSISSKPAWDILTGI---CIERLPVVTPPLTEM 249
IY K ++ L++ + +N Y+H +++R+ S W+ ++ +E P++T ++
Sbjct: 94 IYSKDELRELLQCFLSLNSHYHHGIIVRAFSE--IWEDVSSAAASAVEASPLITRHVSRA 151
Query: 250 QKNIKNFY 273
++ N+Y
Sbjct: 152 SRDYYNYY 159
>At1g14620.1 68414.m01738 expressed protein
Length = 233
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 572 PQGHWQEGETLRQTAERIVKEQIGSELQIKFISNAPCGFYKYKYPSEMNGKVGAKIFFY 748
P+ + TLR+ AE +K +G F+ NAP + EM K FF+
Sbjct: 132 PEKVYDSEPTLRKCAESALKSVVGDLTHTYFVGNAPMAHMAIQPTEEMPDLPSYKRFFF 190
>At3g10620.1 68416.m01277 diadenosine 5',5'''-P1,P4-tetraphosphate
hydrolase, putative similar to diadenosine
5',5'''-P1,P4-tetraphosphate hydrolase from [Lupinus
angustifolius] GI:1888557, [Hordeum vulgare subsp.
vulgare] GI:2564253; contains Pfam profile PF00293:
NUDIX domain
Length = 216
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = +2
Query: 488 QNINRTVLQRHLVLVTQRKLGNDSKTLLPQGHWQEGETLRQTAERIVKEQIGSELQIKFI 667
+N+ ++ + T +L S +PQG EGE R R +KE+ G + +
Sbjct: 65 RNVGVCLMNSSKKIFTASRLDIPSAWQMPQGGIDEGEDPRVAVMRELKEETGVH-SAEIL 123
Query: 668 SNAPCGFYKYKYPSEMNGKV 727
+ AP + Y +P ++ K+
Sbjct: 124 AEAP-HWITYDFPPDVREKL 142
>At2g02660.1 68415.m00205 hypothetical protein
Length = 421
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +3
Query: 258 YKEFLLTVEFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANEEY 437
YK L + +E + +EI H K L K +++D+DA N++ ED +E+
Sbjct: 246 YKGKLAMIYWEDDVDI-YEINHMAGKN---LDKYLEENLDVDATNELHVWVLEDVEKQEW 301
Query: 438 SKFKF 452
SK+ +
Sbjct: 302 SKYAY 306
>At1g68760.1 68414.m07860 MutT/nudix family protein similar to
SP|Q58549 ADP-ribose pyrophosphatase (EC 3.6.1.13)
{Methanococcus jannaschii}; contains Pfam profile
PF00293: NUDIX domain
Length = 147
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +2
Query: 506 VLQRHLVLVTQRK--LGNDSKTLLPQGHWQEGETLRQTAERIVKEQIGSELQ 655
+L + +L+ +R+ +GN S LP GH + GE+ + A R V E+ G +++
Sbjct: 16 ILNGNSILLGRRRSSIGN-STFALPGGHLEFGESFEECAAREVMEETGLKIE 66
>At4g30590.1 68417.m04340 plastocyanin-like domain-containing
protein
Length = 190
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +3
Query: 306 NHEIQH--ENDKKQAELFKAESQDVDIDAVNKVTAQDFEDA-ANEEYSKFKFGNLETDAD 476
N+ + H EN++ + F D+ +D+V +VT +D+E ++ GN + D
Sbjct: 44 NNTLNHWAENNRFKVGDFIVWKYDMKVDSVLQVTKEDYESCNTANPLKQYNDGNTKVALD 103
Query: 477 KKG 485
K G
Sbjct: 104 KSG 106
>At4g24230.2 68417.m03478 acyl-CoA binding protein, putative / ACBP,
putative contains similarity to acyl-CoA binding protein
2 [Arabidopsis thaliana] gi|12039034|gb|AAG46057
Length = 362
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/64 (23%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +3
Query: 324 ENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGNLETDADKKG-DKTST 500
EN++ ++ AES++V ++ + + + +A NEE ++ +E D D +G +++
Sbjct: 175 ENEESGGDVLVAESEEVRVEKSSNMVEESDAEAENEEKTEL---TIEEDDDWEGIERSEL 231
Query: 501 ERCY 512
E+ +
Sbjct: 232 EKAF 235
>At4g24230.1 68417.m03477 acyl-CoA binding protein, putative / ACBP,
putative contains similarity to acyl-CoA binding protein
2 [Arabidopsis thaliana] gi|12039034|gb|AAG46057
Length = 364
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/64 (23%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +3
Query: 324 ENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGNLETDADKKG-DKTST 500
EN++ ++ AES++V ++ + + + +A NEE ++ +E D D +G +++
Sbjct: 175 ENEESGGDVLVAESEEVRVEKSSNMVEESDAEAENEEKTEL---TIEEDDDWEGIERSEL 231
Query: 501 ERCY 512
E+ +
Sbjct: 232 EKAF 235
>At3g12600.1 68416.m01569 MutT/nudix family protein contains Pfam
profile PF00293: NUDIX domain
Length = 180
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 566 LLPQGHWQEGETLRQTAERIVKEQIGSE-LQIKFISN 673
L P+G W+ ET+R+ A R E+ G + + F+ N
Sbjct: 59 LFPKGGWENDETVREAAAREAVEEAGVRGILMDFLGN 95
>At1g30110.1 68414.m03680 diadenosine 5',5'''-P1,P4-tetraphosphate
hydrolase, putative similar to diadenosine
5',5'''-P1,P4-tetraphosphate hydrolase GI:1888557 from
[Lupinus angustifolius], [Hordeum vulgare subsp.
vulgare] GI:2564253; contains Pfam profile PF00293:
NUDIX domain
Length = 175
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = +2
Query: 518 HLVLVTQRKLGNDSKTLLPQGHWQEGETLRQTAERIVKEQIGSELQIKFISNAPCGFYKY 697
+LV V R L +PQG ++GE + A R ++E+ G + + +S P + Y
Sbjct: 21 NLVFVASR-LNVPGAWQMPQGGIEDGEDPKSAAMRELQEETG-VVSAEIVSEVP-NWLTY 77
Query: 698 KYPSEMNGKV 727
+P + KV
Sbjct: 78 DFPPAVKAKV 87
>At2g42190.1 68415.m05221 expressed protein ; similar to
GP|9826|X07453
Length = 141
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +3
Query: 288 EKSMKSN-HEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGNLE 464
+K MK + E + E+D++ E + E +D +ID VT++D ++ + S +L
Sbjct: 37 QKPMKDDFEEEEEEDDEEMVEKMEVEDEDEEIDD-GSVTSKDLKE-RKRKMSNGSNTDLT 94
Query: 465 TDADKKGDKTSTE 503
+ + G K +T+
Sbjct: 95 EEENGLGSKPNTD 107
>At1g22060.1 68414.m02759 expressed protein
Length = 1999
Score = 28.7 bits (61), Expect = 5.1
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Frame = +3
Query: 252 KKYKEFLLTVEFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANE 431
+K E V KS K+N+E K+ AEL + E+ + T Q DA
Sbjct: 835 QKIDELESVVLESKSWKTNYETCICEKKELAELMEKEAVEKAHYRTRLATVQAEFDAVRG 894
Query: 432 EYSKFKF--GNLETDADKKGDK-TSTERCYND 518
++ GNL+ + DK +T CYN+
Sbjct: 895 KFDDLATANGNLQQNLSSLTDKLINTLGCYNE 926
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 184 WDILTGICIERLPVVTPPLTEMQKN 258
WD+ TG C++ LP + P+T + N
Sbjct: 140 WDVTTGKCLKVLPAHSDPVTAVDFN 164
>At1g09415.1 68414.m01053 NPR1/NIM1-interacting protein 3 (NIMIN-3)
identical to NIMIN-3 protein [Arabidopsis thaliana]
GI:12057158, cDNA NIMIN-3 protein (nimin-3
gene)GI:12057157
Length = 112
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 282 EFEKSMKSNHEIQHENDKKQAELFKAES-QDVDIDAVNKVTAQDFEDAANEEYS 440
E K + S+ E + + ++++A + + S Q D +NK A + E AANE S
Sbjct: 32 EMRKYVNSSMEKKRQEEEERARVRRFPSFQPEDFIFMNKAEANNIEKAANESSS 85
>At5g26350.1 68418.m03150 hypothetical protein
Length = 126
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 231 SAVN*NAKKYKEFLLTVEFEKSMKSNHEIQHENDKKQAE 347
SA N + KK+KE +E EK + Q E +KKQ E
Sbjct: 44 SATNEDMKKHKEEKNKLEEEKKKLEKEKKQLEEEKKQLE 82
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/84 (21%), Positives = 38/84 (45%)
Frame = +3
Query: 255 KYKEFLLTVEFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANEE 434
K KE E KSMK + + + ++++ K E D++ + + ++ NE+
Sbjct: 1079 KKKEDKKEHEDNKSMKKEEDKKEKKKHEESKSRKKEEDKKDMEKLEDQNSNKKKEDKNEK 1138
Query: 435 YSKFKFGNLETDADKKGDKTSTER 506
++ ++DKK K + E+
Sbjct: 1139 KKSQHVKLVKKESDKKEKKENEEK 1162
>At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family
protein Common family members: At4g18570, At4g04980,
At5g61090 [Arabidopsis thaliana]; identical to cDNA
CHUP1 for actin binding protein GI:28071264
Length = 1004
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +3
Query: 273 LTVEFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANEEYSKFKF 452
L V+ + + N E+QHE K++ + K +S + I ++ +T D EE + K
Sbjct: 269 LEVQVMELKRKNRELQHE--KRELSI-KLDSAEARIATLSNMTESDKVAKVREEVNNLKH 325
Query: 453 GN 458
N
Sbjct: 326 NN 327
>At1g63205.1 68414.m07143 hypothetical protein
Length = 189
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 718 WKSWRQNFFLLCQLQSGNPTKSKVNWLTRKELDE 819
W +W ++ +LLC + +P K +++TR E DE
Sbjct: 8 WNAWLEDAYLLCTPE--DPECLKHHYITRTEKDE 39
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,824,700
Number of Sequences: 28952
Number of extensions: 309298
Number of successful extensions: 957
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 957
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1960634400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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