Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021832
         (842 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    29   0.23 
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    29   0.23 
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    25   3.8  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           24   6.7  

>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 28.7 bits (61), Expect = 0.23
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
 Frame = +2

Query: 587 RQWRHLAPHPRAQAAALSGTLSCHSTRHMSFAISPLPYRA-RPREAGNSTHTKRNTFGLK 763
           +Q  H A  P +  +  S      ST   S ++  LP  +  PR AG+S++++RN+  L+
Sbjct: 27  QQQLHSADVPHSSTSQSSRRPQHSSTSASSSSVPTLPTTSGEPRAAGSSSNSRRNSKQLQ 86

Query: 764 SRYQAIKSKK 793
               A K  K
Sbjct: 87  RDELAAKMGK 96


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 28.7 bits (61), Expect = 0.23
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
 Frame = +2

Query: 587 RQWRHLAPHPRAQAAALSGTLSCHSTRHMSFAISPLPYRA-RPREAGNSTHTKRNTFGLK 763
           +Q  H A  P +  +  S      ST   S ++  LP  +  PR AG+S++++RN+  L+
Sbjct: 27  QQQLHSADVPHSSTSQSSRRPQHSSTSASSSSVPTLPTTSGEPRAAGSSSNSRRNSKQLQ 86

Query: 764 SRYQAIKSKK 793
               A K  K
Sbjct: 87  RDELAAKMGK 96


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 303 HGVERDHRGRQSGFEKRQRKP 365
           HGV R    R+ G + R+RKP
Sbjct: 208 HGVNRPLAMRKDGIQTRKRKP 228


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 611 HPRAQAAALSGTLSCHSTRHMSFA 682
           HP   A+   GT+S H   H S+A
Sbjct: 182 HPSMVASGAYGTMSMHPQTHHSWA 205


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 779,295
Number of Sequences: 2352
Number of extensions: 14651
Number of successful extensions: 54
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89305416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)