Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021831
         (778 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   5.5  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   5.5  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   7.3  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              21   9.7  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   9.7  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    21   9.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   9.7  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 12/56 (21%), Positives = 24/56 (42%)
 Frame = -2

Query: 273 THDRRCLAIKTSSYLCQLLFIFFVSLNIYQGQRYDGFEVWIMFRSFWISTFALTVS 106
           T  R   A+  + ++C   F     L +Y+   YD    W+   +  +  F+ T++
Sbjct: 257 TITRMLSAVVITFFICWAPFHVQRLLYVYEDSTYDDINQWVYPLTGCLYYFSTTIN 312


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 596 SDDESSITRSEDTDTPEPKST 658
           S   SSI+ SE+ D  +PK T
Sbjct: 372 SSSSSSISSSEENDFWQPKPT 392


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 608 SSITRSEDTDTPEPKSTEKSS 670
           +S+T    +D  EP ST K S
Sbjct: 264 NSVTCDRPSDEAEPSSTSKKS 284


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = +2

Query: 497 VWKPQNAELWKAKFAEAQEIVRTKCSLYCQDQSSDDESSIT 619
           + K +  E+ + K   + +I  TKC  +C  Q     +S T
Sbjct: 45  ITKDEYDEIGRLKRTCSGDISVTKCEGFCNSQVQPSVASTT 85


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -1

Query: 424 SDPQCTFILISGVMK*LAHTFRVLSLLITTRTVL 323
           S  + T IL++GV+    +TF +L+   T   +L
Sbjct: 549 SGRELTIILLAGVLVCYLNTFLLLATPTTVTCIL 582


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = +2

Query: 497 VWKPQNAELWKAKFAEAQEIVRTKCSLYCQDQSSDDESSIT 619
           + K +  E+ + K   + +I  TKC  +C  Q     +S T
Sbjct: 45  ITKDEYDEIGRLKRTCSGDISVTKCEGFCNSQVQPSVASTT 85


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -1

Query: 424 SDPQCTFILISGVMK*LAHTFRVLSLLITTRTVL 323
           S  + T IL++GV+    +TF +L+   T   +L
Sbjct: 639 SGRELTIILLAGVLVCYLNTFLLLATPTTVTCIL 672


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,527
Number of Sequences: 438
Number of extensions: 3612
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24396777
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)