Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021829
         (771 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000024BDBF Cluster: PREDICTED: hypothetical protein;...    34   4.5  
UniRef50_Q8IBL3 Cluster: Putative uncharacterized protein MAL7P1...    33   5.9  
UniRef50_A2FBM2 Cluster: Putative uncharacterized protein; n=4; ...    33   5.9  

>UniRef50_UPI000024BDBF Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 569

 Score = 33.9 bits (74), Expect = 4.5
 Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 4/40 (10%)
 Frame = -2

Query: 593 NTQYIFLSI----YNLKNIYDINVEDVASLIHTFPVTRAI 486
           NTQY+FLS+     N K + +I  +++A  +H FP++R +
Sbjct: 281 NTQYVFLSLAAMDLNFKPLLNICSKNIAENVHEFPISRLV 320


>UniRef50_Q8IBL3 Cluster: Putative uncharacterized protein
           MAL7P1.127; n=3; Plasmodium|Rep: Putative
           uncharacterized protein MAL7P1.127 - Plasmodium
           falciparum (isolate 3D7)
          Length = 1605

 Score = 33.5 bits (73), Expect = 5.9
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 638 LHHPIVCLHFRKRSTNTQYIFLSIYNLKNIYDI 540
           L HP +C +F    TN  YI  S Y   ++YD+
Sbjct: 80  LSHPNICTYFHMSRTNNNYILCSEYYTLSLYDL 112


>UniRef50_A2FBM2 Cluster: Putative uncharacterized protein; n=4;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 763

 Score = 33.5 bits (73), Expect = 5.9
 Identities = 14/52 (26%), Positives = 24/52 (46%)
 Frame = -1

Query: 270 LDDPKCGLNVSLQTR*GILHSRSDRLWHNRWRQVEVTTHHHEGYLSSATKKN 115
           + D   G+ ++L  R G   + +D+ W  RW       H+ E Y S +  +N
Sbjct: 156 MKDEGSGITLTLLVRGGYQVTDADKFWFGRWSGPRGNLHYFENYTSDSPSRN 207


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 696,360,046
Number of Sequences: 1657284
Number of extensions: 13829694
Number of successful extensions: 29087
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29081
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64615845515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)