Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021829
         (771 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   4.7  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   4.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   4.7  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   6.2  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 465 KTTILHIEKEVSLHSRVPSCTRT 397
           + T+L IE  V L ++V S TRT
Sbjct: 396 EVTVLEIEDWVLLKNKVTSDTRT 418


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 582 ILGVSRPLSKMKTDDRM 632
           ILG+S  L K+KT D +
Sbjct: 289 ILGISYSLEKLKTGDEI 305


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 582 ILGVSRPLSKMKTDDRM 632
           ILG+S  L K+KT D +
Sbjct: 289 ILGISYSLEKLKTGDEI 305


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 77  LLNYTNCIIIKLP 115
           LLNY NC++ K P
Sbjct: 53  LLNYINCLLEKGP 65


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,000
Number of Sequences: 336
Number of extensions: 3915
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)