Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021829
         (771 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    26   1.1  
AY341231-1|AAR13795.1|  231|Anopheles gambiae vacuolar ATPase pr...    25   3.4  
AY341230-1|AAR13794.1|  231|Anopheles gambiae vacuolar ATPase pr...    25   3.4  
AY341229-1|AAR13793.1|  231|Anopheles gambiae vacuolar ATPase pr...    25   3.4  
AY341228-1|AAR13792.1|  231|Anopheles gambiae vacuolar ATPase pr...    25   3.4  
AY341227-1|AAR13791.1|  231|Anopheles gambiae vacuolar ATPase pr...    25   3.4  
AY341226-1|AAR13790.1|  231|Anopheles gambiae vacuolar ATPase pr...    25   3.4  
AY341225-1|AAR13789.1|  231|Anopheles gambiae vacuolar ATPase pr...    25   3.4  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    23   7.9  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    23   7.9  

>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
 Frame = +3

Query: 378 VILYKKWCA-YNLVHVNEVKLLFRCVVLWFSSFILKSDCSCNRE 506
           ++LY  W   Y +  + +  L +   V W    I KS C  N E
Sbjct: 116 IVLYNNWDGNYEVTLMTKATLKYTGEVFWEPPAIYKSSCEMNVE 159


>AY341231-1|AAR13795.1|  231|Anopheles gambiae vacuolar ATPase
           protein.
          Length = 231

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 126 LPKTDSPRDDG*LPRPVATGYARDGQI 206
           +P    P DD   P P  TGY  +GQI
Sbjct: 187 IPILTMPNDDITHPIPDLTGYITEGQI 213


>AY341230-1|AAR13794.1|  231|Anopheles gambiae vacuolar ATPase
           protein.
          Length = 231

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 126 LPKTDSPRDDG*LPRPVATGYARDGQI 206
           +P    P DD   P P  TGY  +GQI
Sbjct: 187 IPILTMPNDDITHPIPDLTGYITEGQI 213


>AY341229-1|AAR13793.1|  231|Anopheles gambiae vacuolar ATPase
           protein.
          Length = 231

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 126 LPKTDSPRDDG*LPRPVATGYARDGQI 206
           +P    P DD   P P  TGY  +GQI
Sbjct: 187 IPILTMPNDDITHPIPDLTGYITEGQI 213


>AY341228-1|AAR13792.1|  231|Anopheles gambiae vacuolar ATPase
           protein.
          Length = 231

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 126 LPKTDSPRDDG*LPRPVATGYARDGQI 206
           +P    P DD   P P  TGY  +GQI
Sbjct: 187 IPILTMPNDDITHPIPDLTGYITEGQI 213


>AY341227-1|AAR13791.1|  231|Anopheles gambiae vacuolar ATPase
           protein.
          Length = 231

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 126 LPKTDSPRDDG*LPRPVATGYARDGQI 206
           +P    P DD   P P  TGY  +GQI
Sbjct: 187 IPILTMPNDDITHPIPDLTGYITEGQI 213


>AY341226-1|AAR13790.1|  231|Anopheles gambiae vacuolar ATPase
           protein.
          Length = 231

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 126 LPKTDSPRDDG*LPRPVATGYARDGQI 206
           +P    P DD   P P  TGY  +GQI
Sbjct: 187 IPILTMPNDDITHPIPDLTGYITEGQI 213


>AY341225-1|AAR13789.1|  231|Anopheles gambiae vacuolar ATPase
           protein.
          Length = 231

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 126 LPKTDSPRDDG*LPRPVATGYARDGQI 206
           +P    P DD   P P  TGY  +GQI
Sbjct: 187 IPILTMPNDDITHPIPDLTGYITEGQI 213


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 505 SLLQEQSDLRMNEENHNTTHRK 440
           SL+  + DLR  +EN N  H+K
Sbjct: 531 SLMSLEKDLRSLDENVNQIHQK 552


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 505 SLLQEQSDLRMNEENHNTTHRK 440
           SL+  + DLR  +EN N  H+K
Sbjct: 532 SLMSLEKDLRSLDENVNQIHQK 553


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 749,431
Number of Sequences: 2352
Number of extensions: 14479
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)