Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021827
(697 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q3ZTR5 Cluster: Clock; n=2; Endopterygota|Rep: Clock - ... 105 8e-22
UniRef50_Q6VRU6 Cluster: CLOCK; n=1; Antheraea pernyi|Rep: CLOCK... 97 5e-19
UniRef50_UPI00015B439D Cluster: PREDICTED: similar to circadian ... 93 4e-18
UniRef50_Q16LQ2 Cluster: Circadian locomoter output cycles kaput... 93 6e-18
UniRef50_UPI0000D574BD Cluster: PREDICTED: similar to CG7391-PA,... 93 8e-18
UniRef50_Q2KPA5 Cluster: Clock; n=1; Macrobrachium rosenbergii|R... 85 1e-15
UniRef50_O61735 Cluster: Circadian locomoter output cycles prote... 81 2e-14
UniRef50_Q99743 Cluster: Neuronal PAS domain-containing protein ... 69 1e-10
UniRef50_UPI0000F2E104 Cluster: PREDICTED: similar to Neuronal P... 67 3e-10
UniRef50_O15516 Cluster: Circadian locomoter output cycles prote... 65 2e-09
UniRef50_UPI0000E480AD Cluster: PREDICTED: similar to clock prot... 64 2e-09
UniRef50_UPI000069EDBD Cluster: Neuronal PAS domain-containing p... 58 2e-07
UniRef50_Q4S8R3 Cluster: Chromosome 7 SCAF14703, whole genome sh... 53 8e-06
UniRef50_UPI0000E80320 Cluster: PREDICTED: similar to bHLH-PAS t... 51 2e-05
UniRef50_Q8JIG3 Cluster: BHLH-PAS transcription factor; n=4; Clu... 51 2e-05
UniRef50_A7RLF0 Cluster: Predicted protein; n=1; Nematostella ve... 47 5e-04
UniRef50_P90891 Cluster: Putative uncharacterized protein; n=1; ... 37 0.41
UniRef50_A7SLJ4 Cluster: Predicted protein; n=1; Nematostella ve... 34 2.9
UniRef50_Q24BX0 Cluster: Putative uncharacterized protein; n=1; ... 33 5.1
UniRef50_UPI00006D000D Cluster: hypothetical protein TTHERM_0076... 33 8.8
UniRef50_UPI0000EB0698 Cluster: UPI0000EB0698 related cluster; n... 33 8.8
>UniRef50_Q3ZTR5 Cluster: Clock; n=2; Endopterygota|Rep: Clock -
Danaus plexippus (Monarch)
Length = 602
Score = 105 bits (253), Expect = 8e-22
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = +1
Query: 499 GSVYMLVNELSSMVSTNNRKMDKSTVLKSTISFLKNHNEISVRSRAHDIQEDWKP 663
G MLVNEL SMVSTNNRKMDKSTVLKSTISFLKNHNEI+VRSRAHD+QEDWKP
Sbjct: 25 GQFNMLVNELGSMVSTNNRKMDKSTVLKSTISFLKNHNEITVRSRAHDVQEDWKP 79
>UniRef50_Q6VRU6 Cluster: CLOCK; n=1; Antheraea pernyi|Rep: CLOCK -
Antheraea pernyi (Chinese oak silk moth)
Length = 611
Score = 96.7 bits (230), Expect = 5e-19
Identities = 42/51 (82%), Positives = 51/51 (100%)
Frame = +1
Query: 511 MLVNELSSMVSTNNRKMDKSTVLKSTISFLKNHNEISVRSRAHDIQEDWKP 663
+L+NELSS+V++N+RKMDKSTVLKSTISFL+NHNEI+VRSRAHDIQ+DWKP
Sbjct: 29 LLINELSSLVTSNSRKMDKSTVLKSTISFLRNHNEITVRSRAHDIQDDWKP 79
>UniRef50_UPI00015B439D Cluster: PREDICTED: similar to circadian
locomoter output cycles kaput protein (dclock) (dpas1);
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
circadian locomoter output cycles kaput protein (dclock)
(dpas1) - Nasonia vitripennis
Length = 1048
Score = 93.5 bits (222), Expect = 4e-18
Identities = 42/51 (82%), Positives = 47/51 (92%)
Frame = +1
Query: 511 MLVNELSSMVSTNNRKMDKSTVLKSTISFLKNHNEISVRSRAHDIQEDWKP 663
MLVNEL SMV+TN RKMDKS+VLKSTI FLKNHNE++VRSR H+IQEDWKP
Sbjct: 479 MLVNELGSMVNTNTRKMDKSSVLKSTILFLKNHNELAVRSRTHEIQEDWKP 529
>UniRef50_Q16LQ2 Cluster: Circadian locomoter output cycles kaput
protein; n=2; Nematocera|Rep: Circadian locomoter output
cycles kaput protein - Aedes aegypti (Yellowfever
mosquito)
Length = 900
Score = 93.1 bits (221), Expect = 6e-18
Identities = 42/51 (82%), Positives = 49/51 (96%)
Frame = +1
Query: 511 MLVNELSSMVSTNNRKMDKSTVLKSTISFLKNHNEISVRSRAHDIQEDWKP 663
+LVNELSSMVS+N+RKMDKSTVLKSTI+FLK+HNEI+VRSR H+IQ DWKP
Sbjct: 35 LLVNELSSMVSSNSRKMDKSTVLKSTIAFLKSHNEIAVRSRVHEIQTDWKP 85
>UniRef50_UPI0000D574BD Cluster: PREDICTED: similar to CG7391-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG7391-PA, isoform A - Tribolium castaneum
Length = 579
Score = 92.7 bits (220), Expect = 8e-18
Identities = 42/51 (82%), Positives = 49/51 (96%)
Frame = +1
Query: 511 MLVNELSSMVSTNNRKMDKSTVLKSTISFLKNHNEISVRSRAHDIQEDWKP 663
+LVNELSSMV+T +RKMDKSTVLKSTI+FLKNHNEI+VRSR ++IQEDWKP
Sbjct: 28 LLVNELSSMVATGSRKMDKSTVLKSTIAFLKNHNEIAVRSRVNEIQEDWKP 78
>UniRef50_Q2KPA5 Cluster: Clock; n=1; Macrobrachium rosenbergii|Rep:
Clock - Macrobrachium rosenbergii (Giant fresh water
prawn)
Length = 704
Score = 85.4 bits (202), Expect = 1e-15
Identities = 37/51 (72%), Positives = 49/51 (96%)
Frame = +1
Query: 511 MLVNELSSMVSTNNRKMDKSTVLKSTISFLKNHNEISVRSRAHDIQEDWKP 663
+L+NELSSMV++NNRKMDKSTVLK+TI+FLKN EISVR+++++I+EDWKP
Sbjct: 29 LLINELSSMVASNNRKMDKSTVLKATIAFLKNQKEISVRTQSNEIREDWKP 79
>UniRef50_O61735 Cluster: Circadian locomoter output cycles protein
kaput; n=5; Sophophora|Rep: Circadian locomoter output
cycles protein kaput - Drosophila melanogaster (Fruit
fly)
Length = 1027
Score = 81.4 bits (192), Expect = 2e-14
Identities = 35/50 (70%), Positives = 46/50 (92%)
Frame = +1
Query: 514 LVNELSSMVSTNNRKMDKSTVLKSTISFLKNHNEISVRSRAHDIQEDWKP 663
LVN+LS+++ST++RKMDKSTVLKSTI+FLKNHNE + RS+ +IQ+DWKP
Sbjct: 34 LVNDLSALISTSSRKMDKSTVLKSTIAFLKNHNEATDRSKVFEIQQDWKP 83
>UniRef50_Q99743 Cluster: Neuronal PAS domain-containing protein 2;
n=44; Coelomata|Rep: Neuronal PAS domain-containing
protein 2 - Homo sapiens (Human)
Length = 824
Score = 68.5 bits (160), Expect = 1e-10
Identities = 29/51 (56%), Positives = 39/51 (76%)
Frame = +1
Query: 511 MLVNELSSMVSTNNRKMDKSTVLKSTISFLKNHNEISVRSRAHDIQEDWKP 663
+L+ ELSSM+ N RKMDK+TVL+ I FL+ HNE+S ++ DIQ+DWKP
Sbjct: 27 VLIKELSSMLPGNTRKMDKTTVLEKVIGFLQKHNEVSAQTEICDIQQDWKP 77
>UniRef50_UPI0000F2E104 Cluster: PREDICTED: similar to Neuronal PAS
domain protein 2; n=1; Monodelphis domestica|Rep:
PREDICTED: similar to Neuronal PAS domain protein 2 -
Monodelphis domestica
Length = 838
Score = 67.3 bits (157), Expect = 3e-10
Identities = 28/51 (54%), Positives = 39/51 (76%)
Frame = +1
Query: 511 MLVNELSSMVSTNNRKMDKSTVLKSTISFLKNHNEISVRSRAHDIQEDWKP 663
+L+ ELSSM+ N RK+DK+TVL+ I FL+ HNE+S ++ DIQ+DWKP
Sbjct: 35 VLIKELSSMLPGNTRKLDKTTVLEKVIGFLQKHNEVSAQTELCDIQQDWKP 85
>UniRef50_O15516 Cluster: Circadian locomoter output cycles protein
kaput; n=83; Euteleostomi|Rep: Circadian locomoter
output cycles protein kaput - Homo sapiens (Human)
Length = 846
Score = 64.9 bits (151), Expect = 2e-09
Identities = 28/51 (54%), Positives = 39/51 (76%)
Frame = +1
Query: 511 MLVNELSSMVSTNNRKMDKSTVLKSTISFLKNHNEISVRSRAHDIQEDWKP 663
+L+ EL SM+ N RKMDKSTVL+ +I FL+ H EI+ +S A +I++DWKP
Sbjct: 52 VLIKELGSMLPGNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKP 102
>UniRef50_UPI0000E480AD Cluster: PREDICTED: similar to clock
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to clock protein - Strongylocentrotus
purpuratus
Length = 410
Score = 64.5 bits (150), Expect = 2e-09
Identities = 28/51 (54%), Positives = 39/51 (76%)
Frame = +1
Query: 511 MLVNELSSMVSTNNRKMDKSTVLKSTISFLKNHNEISVRSRAHDIQEDWKP 663
+L+ EL SMVST RK+DKS VL++TI FLK HN++ ++S + I E+WKP
Sbjct: 48 VLIQELCSMVSTKTRKLDKSAVLRATIHFLKAHNDMVMKSEKNAINENWKP 98
>UniRef50_UPI000069EDBD Cluster: Neuronal PAS domain-containing
protein 2 (Neuronal PAS2) (Member of PAS protein 4)
(Basic-helix-loop-helix-PAS protein MOP4).; n=2; Xenopus
tropicalis|Rep: Neuronal PAS domain-containing protein 2
(Neuronal PAS2) (Member of PAS protein 4)
(Basic-helix-loop-helix-PAS protein MOP4). - Xenopus
tropicalis
Length = 770
Score = 58.0 bits (134), Expect = 2e-07
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = +1
Query: 511 MLVNELSSMVSTNNRKMDKSTVLKSTISFLKNHNEISVRSRAHDIQEDWKP 663
+L+ ELS+M+ N R+M K+TVL+ I +L+ HNE + + DIQ+DWKP
Sbjct: 27 VLIKELSTMLPENTRRMHKTTVLEKVIGYLQKHNETTDETEICDIQQDWKP 77
>UniRef50_Q4S8R3 Cluster: Chromosome 7 SCAF14703, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 7 SCAF14703, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 909
Score = 52.8 bits (121), Expect = 8e-06
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Frame = +1
Query: 511 MLVNELSSMVSTNN--RKMDKSTVLKSTISFLKNHNEISVRSRAHDIQEDWKP 663
+L+ EL +M+ RKMDKST+L+ TI FL+ +I+ R+ D+++DWKP
Sbjct: 519 VLIKELCTMLQGQGHPRKMDKSTILQRTIDFLQKQKDITARNETCDVRQDWKP 571
>UniRef50_UPI0000E80320 Cluster: PREDICTED: similar to bHLH-PAS
transcription factor; n=2; Gallus gallus|Rep: PREDICTED:
similar to bHLH-PAS transcription factor - Gallus gallus
Length = 1024
Score = 51.2 bits (117), Expect = 2e-05
Identities = 23/53 (43%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Frame = +1
Query: 511 MLVNELSSMVSTNNR--KMDKSTVLKSTISFLKNHNEISVRSRAHDIQEDWKP 663
+L+ EL +M+ + KMDKST+L+ TI FL+ EI+ ++ A +I++DWKP
Sbjct: 220 VLIKELCTMLQGHGHPLKMDKSTILQRTIDFLQKQKEITAQTEACEIRQDWKP 272
>UniRef50_Q8JIG3 Cluster: BHLH-PAS transcription factor; n=4;
Clupeocephala|Rep: BHLH-PAS transcription factor - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 845
Score = 51.2 bits (117), Expect = 2e-05
Identities = 22/53 (41%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Frame = +1
Query: 511 MLVNELSSMVSTNN--RKMDKSTVLKSTISFLKNHNEISVRSRAHDIQEDWKP 663
+L+ EL +M+ RKMDKST+L+ TI FL+ EI+ ++ + ++++DWKP
Sbjct: 60 VLIKELCTMLQGQGHPRKMDKSTILQRTIDFLQKQKEITAQTESCEVRQDWKP 112
>UniRef50_A7RLF0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 671
Score = 46.8 bits (106), Expect = 5e-04
Identities = 22/51 (43%), Positives = 37/51 (72%)
Frame = +1
Query: 511 MLVNELSSMVSTNNRKMDKSTVLKSTISFLKNHNEISVRSRAHDIQEDWKP 663
+L+ EL+S++S ++RK+DKSTVLK I+ LK+ ++S S + +E W+P
Sbjct: 39 VLIGELASIISPSSRKVDKSTVLKKAIACLKSQKDLSPASCSKP-REGWQP 88
>UniRef50_P90891 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 2972
Score = 37.1 bits (82), Expect = 0.41
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = -1
Query: 406 QFENYCLSSHYRLRSNTIPWARFKTKSHSPLLDNNYACISTVFFYSAQSFCI 251
QF NYC++ R S+ W P+L NYAC+S F + S CI
Sbjct: 207 QFPNYCIALDLR-NSSFFGWRAVPCTRQLPILCQNYACLSGTFRCADNSKCI 257
>UniRef50_A7SLJ4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 747
Score = 34.3 bits (75), Expect = 2.9
Identities = 13/38 (34%), Positives = 30/38 (78%), Gaps = 3/38 (7%)
Frame = +1
Query: 517 VNELSSMV---STNNRKMDKSTVLKSTISFLKNHNEIS 621
+ EL++MV +++ +K+DK+TVL+ ++++K HN+++
Sbjct: 147 ITELAAMVPMCASSRKKLDKTTVLQMAVNYMKIHNDLT 184
>UniRef50_Q24BX0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 409
Score = 33.5 bits (73), Expect = 5.1
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = +2
Query: 29 LERFCLKTILLGLVVTITCFCLSCKFLSNLQV*IFLNKLFSLT*MHDNV*FGFNCVKLRR 208
L +F + L ++ ++C+FLSN Q IF + ++ + + + F F+ V
Sbjct: 249 LSQFIVYDFLRNQIIKQASSSINCRFLSNFQQTIFCLETQNILKIFNMISFEFSTVNTNL 308
Query: 209 SAQFVINDFSTIN 247
S Q IN F ++
Sbjct: 309 SQQLQINKFQALS 321
>UniRef50_UPI00006D000D Cluster: hypothetical protein
TTHERM_00760260; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00760260 - Tetrahymena
thermophila SB210
Length = 700
Score = 32.7 bits (71), Expect = 8.8
Identities = 14/60 (23%), Positives = 32/60 (53%)
Frame = -1
Query: 403 FENYCLSSHYRLRSNTIPWARFKTKSHSPLLDNNYACISTVFFYSAQSFCIFVDSTEIVN 224
++ ++ ++ +N + + K K L+ NNY+ V+F S Q+F I+ + +I++
Sbjct: 127 YDKLAINLNFSQLTNKLTESNIKLKRDYDLIKNNYSIDEIVYFDSQQNFVIYDNQLQIIH 186
>UniRef50_UPI0000EB0698 Cluster: UPI0000EB0698 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB0698 UniRef100
entry - Canis familiaris
Length = 701
Score = 32.7 bits (71), Expect = 8.8
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -2
Query: 135 KNIYTCKLLKNLHDKQKHVIVTTK 64
+NIYT ++LKNLHDK + +TK
Sbjct: 336 RNIYTSRILKNLHDKDYPKVSSTK 359
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 628,147,160
Number of Sequences: 1657284
Number of extensions: 11744260
Number of successful extensions: 28245
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 27200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28241
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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