Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021826
(837 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_1087 + 8901950-8902102,8902960-8903996,8904438-8904586,890... 32 0.65
01_06_0456 + 29521282-29522064 32 0.65
10_06_0143 - 11183574-11183761,11183989-11184344,11184437-111845... 31 1.1
02_05_1030 + 33623372-33623975,33624098-33624105 31 1.5
03_04_0006 + 16257288-16259522 30 2.0
06_03_0854 + 25400855-25403741,25406174-25407708 29 3.5
02_02_0406 - 9888167-9888570,9890168-9890248,9892207-9892600 29 3.5
01_07_0197 + 41912207-41912652,41913226-41913800,41913828-419157... 29 4.6
06_03_1448 + 30235336-30236763 29 6.1
06_03_1443 + 30182018-30183445 29 6.1
06_03_1440 + 30166515-30167942 29 6.1
06_03_1437 + 30151030-30152457 29 6.1
06_03_1429 + 30100834-30102261 29 6.1
06_03_1425 + 30084383-30085810 29 6.1
06_03_1420 - 30053713-30055140 29 6.1
06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764 29 6.1
03_06_0069 - 31449319-31450368 29 6.1
01_06_1520 - 37950262-37950271,37950639-37950749,37950965-379511... 29 6.1
01_06_1406 - 37073548-37073822,37073892-37074111,37074200-370742... 29 6.1
08_01_0799 + 7734031-7735102,7735453-7735475 28 8.0
03_02_0740 - 10836752-10837052,10837756-10837814,10837901-108384... 28 8.0
03_01_0196 + 1559190-1560395 28 8.0
>06_01_1087 + 8901950-8902102,8902960-8903996,8904438-8904586,
8905437-8905690,8905785-8908799,8908889-8909001,
8909975-8910164,8910399-8910512,8910591-8910698,
8910941-8911073,8911206-8911408,8911626-8911826
Length = 1889
Score = 31.9 bits (69), Expect = 0.65
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +1
Query: 28 DENSQMPRHLISDAHEWINEIPTVPIYYLAKPQPRERAWENQRGKKTLLSL 180
D+ + PR + D EW N PT+ ++ + +PRE Q+ K + L
Sbjct: 1391 DQGNCAPRTVECDEGEWYNNFPTIDENHVQRNKPREEQIFQQKLKPAIFIL 1441
>01_06_0456 + 29521282-29522064
Length = 260
Score = 31.9 bits (69), Expect = 0.65
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Frame = -1
Query: 429 AWQC--PRTGSRGSFKRRRAFPPRHHSARLER----NTVRPPILSTA 307
AW+C P +G+RG +RRR P S R R +T+RP + S A
Sbjct: 12 AWRCYSPASGARGGSRRRRRRPAGTTSRRCSRADRLDTLRPYVTSAA 58
>10_06_0143 -
11183574-11183761,11183989-11184344,11184437-11184592,
11184825-11184994,11185906-11186064,11186856-11187164,
11187281-11187576,11187825-11188174,11188279-11188434,
11188634-11188803,11189289-11189447,11190702-11191010,
11191172-11191458,11191911-11192263,11192366-11192521,
11192680-11192849,11195800-11195958,11196937-11197254,
11197658-11197786
Length = 1449
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -3
Query: 769 FTSLFDG*TIQRLANFVRNDRKSRHRRIKKQ 677
+ S+FD T+++ NFVRN+R S + KQ
Sbjct: 868 YNSMFDNYTVEQNINFVRNNRSSDINTVTKQ 898
>02_05_1030 + 33623372-33623975,33624098-33624105
Length = 203
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
Frame = +2
Query: 368 GGNARRRLKLPRDPVRGHCQAGSLTGAVHLSKNNAGVLRPAQ------RGQKPAWSKRAK 529
GG+ R + L R+ + G + G +G + + + + R A RG P WS+
Sbjct: 19 GGSGRFKRALLRNLILGLRKGGVASGEMGFHERKSAIKRAADAALAAARGAAPCWSRSLA 78
Query: 530 AGLIQMFSTHRDCESTAYR 586
A L Q HR S + R
Sbjct: 79 AELAQAPQQHRSPPSPSPR 97
>03_04_0006 + 16257288-16259522
Length = 744
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = -3
Query: 241 AKRSP---TYATXLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDSR*GQWE 89
A+RSP Y T L + ARL T PA SP +AV S + G W+
Sbjct: 162 ARRSPWTVVYGTNLRTGETARLTPRGTFDLSPAVSPSGKRVAVASWQGKPGLWD 215
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 241 AKRSPTYATXLMSPYNARLESSSTGSSFPADSPKPVPLAVVS 116
AKR+PT T P AR +++ +F +P P P +V+S
Sbjct: 475 AKRAPTAVTVGAPPPQARTPAAAPAKAF-VSAPAPAPSSVIS 515
>02_02_0406 - 9888167-9888570,9890168-9890248,9892207-9892600
Length = 292
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +2
Query: 386 RLKLPRDPVRGHCQAGSLTGAVHLSKNNAGVLRPAQRGQKPAWSKRAKAGLIQMFSTHRD 565
RL+ P G C A ++ A +S G++ PA+ ++P +R + ++ R+
Sbjct: 30 RLRRPLAAAAGACVAAAVAAAAGVS---LGIVFPAEPAERPFCRERRMLEALPAAASSRE 86
Query: 566 CESTAYR 586
E AYR
Sbjct: 87 EEPEAYR 93
>01_07_0197 +
41912207-41912652,41913226-41913800,41913828-41915748,
41915836-41916049,41916143-41916394,41916469-41916528,
41916646-41916776,41916898-41917012,41917084-41917239
Length = 1289
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 595 YKEFLARG-ARKVTTGITGLWQPSVHSDVAF*SFDVG 702
YK F A G RKV GIT + PS+ D+AF S +G
Sbjct: 633 YKIFQAFGLVRKVEKGITRWYYPSMLDDLAFDSAALG 669
>06_03_1448 + 30235336-30236763
Length = 475
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -2
Query: 434 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 297
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_03_1443 + 30182018-30183445
Length = 475
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -2
Query: 434 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 297
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_03_1440 + 30166515-30167942
Length = 475
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -2
Query: 434 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 297
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_03_1437 + 30151030-30152457
Length = 475
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -2
Query: 434 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 297
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_03_1429 + 30100834-30102261
Length = 475
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -2
Query: 434 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 297
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_03_1425 + 30084383-30085810
Length = 475
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -2
Query: 434 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 297
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_03_1420 - 30053713-30055140
Length = 475
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -2
Query: 434 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 297
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764
Length = 640
Score = 28.7 bits (61), Expect = 6.1
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2
Query: 362 TTLHAWNETPCARRYY 315
TT AW ETPCA R++
Sbjct: 560 TTTEAWVETPCAHRFH 575
>03_06_0069 - 31449319-31450368
Length = 349
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 376 RSSPFKTPA*SGSRTL-PGGEFDWGGTSVKE*RRCPKASSARTETC 510
RSS T S S T P G+ GG + + RCP+ +S+ T+ C
Sbjct: 37 RSSAQATQQRSSSATSSPHGQGQGGGAAEQAPLRCPRCNSSNTKFC 82
>01_06_1520 -
37950262-37950271,37950639-37950749,37950965-37951187,
37951291-37951525,37951641-37951772,37951865-37952230
Length = 358
Score = 28.7 bits (61), Expect = 6.1
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = -3
Query: 301 LPPNRVSNETMKVVVFSDDRAK----RSPTYATXLMSPYNARLESSSTGSSFPADSPKPV 134
+PP VS + VV S A R P ++PY A + SSS+ S+F P P
Sbjct: 1 MPPPAVSTAPVAPVVASSSSAAAAAPRRPRSLRLRVTPY-ASVSSSSSPSTFAVSIPPPP 59
Query: 133 P 131
P
Sbjct: 60 P 60
>01_06_1406 -
37073548-37073822,37073892-37074111,37074200-37074246,
37074404-37074576,37075161-37075238,37075751-37075813,
37075889-37075961,37076150-37076189,37076302-37076368,
37076719-37078472,37079128-37079230,37080041-37080078,
37080221-37080347,37081944-37082152
Length = 1088
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 370 RKRSSPFKTPA*SGSRTLPGGEFDWGGTSV 459
+KR P K PA S S+ LPG + + G SV
Sbjct: 339 KKRGRPRKYPAPSNSKHLPGTDTELGNDSV 368
>08_01_0799 + 7734031-7735102,7735453-7735475
Length = 364
Score = 28.3 bits (60), Expect = 8.0
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = -3
Query: 376 VSATSPLCTLGTKHRAPADI--IDRAPLPPNRVSNETMKVVVFSDDRAKRSPTYATXLMS 203
+S L T RA D+ + A P V +ET + SDD +K +P YAT M+
Sbjct: 70 ISVYLELLTKNCAVRAAYDLRLVKHATGLPMSVYSETTHRMFNSDDSSKFAPPYAT-FMN 128
Query: 202 PYNARLESS 176
N +E+S
Sbjct: 129 RSNLEMEAS 137
>03_02_0740 -
10836752-10837052,10837756-10837814,10837901-10838476,
10839965-10841686,10841776-10842173,10842264-10842318,
10842989-10843048,10843444-10843540,10844885-10844955,
10845029-10845109,10846054-10846124,10847951-10848119,
10848521-10848683,10848752-10848942,10849037-10849168
Length = 1381
Score = 28.3 bits (60), Expect = 8.0
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 449 PPQSNSPPGSVLEPDHAGVLNGDE 378
P +NS P +V +PD +LNGDE
Sbjct: 739 PTSNNSVPQNVDQPDSKKMLNGDE 762
>03_01_0196 + 1559190-1560395
Length = 401
Score = 28.3 bits (60), Expect = 8.0
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = -3
Query: 340 KHRAPADIIDRAPLPPNRVSNETMKVVVFSD-DRAKRSPTYATXLMSPYNARLESSSTGS 164
K R A +ID P+ V N M V +F D A SP A SP + +S +
Sbjct: 303 KSRVAATVIDDTPVCVLTVDNLLMPVELFGDAPAAAPSPDDAAPAPSP---SVADASPPA 359
Query: 163 SFPADSP-KP 137
PAD+P KP
Sbjct: 360 PPPADAPSKP 369
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,062,482
Number of Sequences: 37544
Number of extensions: 545211
Number of successful extensions: 1654
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1653
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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