Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021826
         (837 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    29   0.18 
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    24   6.6  
AY745229-1|AAU93509.1|   56|Anopheles gambiae glutaredoxin protein.    23   8.7  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   8.7  

>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 29.1 bits (62), Expect = 0.18
 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 1/104 (0%)
 Frame = +2

Query: 482 RPAQRGQKPAWSKRAKAGLIQMFSTHRDCESTAYRSFSIKSF*QEVPEKLPQG*LACGSQ 661
           RP  + +KPAW +R +   I    T         R  S     +++ E +    L   + 
Sbjct: 296 RPCSKAEKPAWMRRLE-NRINATRTKIGRMQEYQRGNSSMKVVRQIAEMVKPKELRDLTD 354

Query: 662 AFIATLLFDPSMSALPIIANKIRQALDCSPIK-KGRELGLDRRE 790
           A I  +L D  +  L  +A ++R+  +CS  K + R   ++ RE
Sbjct: 355 ANITEVL-DIHLQRLSALAKRLRRYAECSKRKEQNRMFNINERE 397


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprolinase
            protein.
          Length = 1344

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 10/18 (55%), Positives = 14/18 (77%), Gaps = 1/18 (5%)
 Frame = -2

Query: 431  PPGSVLEP-DHAGVLNGD 381
            PPGS+L+P D A V+ G+
Sbjct: 1092 PPGSILDPSDGAAVVGGN 1109


>AY745229-1|AAU93509.1|   56|Anopheles gambiae glutaredoxin protein.
          Length = 56

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 4/24 (16%)
 Frame = +1

Query: 406 SGSRTLP----GGEFDWGGTSVKE 465
           +G+RT+P    GG F  GGT +K+
Sbjct: 21  TGARTVPRVFIGGNFVGGGTDIKK 44


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 452 VPPQSNSPPGSVLEPD 405
           +PP SNS P S   PD
Sbjct: 868 MPPSSNSSPSSYPSPD 883


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 892,947
Number of Sequences: 2352
Number of extensions: 19620
Number of successful extensions: 43
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88478514
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)