Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021825
(699 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26) 145 3e-35
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 49 4e-06
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 46 3e-05
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 46 3e-05
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_22047| Best HMM Match : Mito_carr (HMM E-Value=0) 40 0.001
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 39 0.003
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 39 0.004
SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.006
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 35 0.055
SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.055
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.096
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.13
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.13
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 33 0.22
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.22
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.22
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.29
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 33 0.29
SB_19190| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 31 0.90
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 30 1.6
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 30 2.1
SB_26166| Best HMM Match : Mito_carr (HMM E-Value=0) 30 2.1
SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17) 29 2.7
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 29 2.7
SB_402| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_25940| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 29 3.6
SB_28356| Best HMM Match : AAA_5 (HMM E-Value=0) 29 3.6
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_44046| Best HMM Match : P19Arf_N (HMM E-Value=5.5) 29 4.8
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 29 4.8
SB_43261| Best HMM Match : TSP_1 (HMM E-Value=0.0026) 29 4.8
SB_48488| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_18294| Best HMM Match : Ctr (HMM E-Value=0.0092) 28 6.3
SB_10272| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_35895| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_16794| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_59334| Best HMM Match : zf-AN1 (HMM E-Value=0.72) 28 8.4
SB_51941| Best HMM Match : fn3 (HMM E-Value=2.1e-11) 28 8.4
>SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26)
Length = 205
Score = 145 bits (352), Expect = 3e-35
Identities = 62/84 (73%), Positives = 76/84 (90%)
Frame = +2
Query: 254 ACGLTHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQG 433
+CGLTHTAVVPLDLVKCR+QVD +KY ++VNGFK++++E+GVRGLA+GWAPTFIGYSMQG
Sbjct: 65 SCGLTHTAVVPLDLVKCRIQVDPKKYGSMVNGFKITLKEDGVRGLARGWAPTFIGYSMQG 124
Query: 434 LCKFGFYEVFKVAYAGMLDDETAY 505
L KFGFYEVFK+ Y ML +E +Y
Sbjct: 125 LGKFGFYEVFKIMYGNMLGEEYSY 148
Score = 68.1 bits (159), Expect = 6e-12
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = +1
Query: 514 TFVYLAASASAEFIADIALSPMEAAKVRIQTMPGFASTLRE 636
T +YLAASASAEF ADIAL+PMEA KVRIQT PG+A TLRE
Sbjct: 152 TSLYLAASASAEFFADIALAPMEAVKVRIQTQPGWAGTLRE 192
Score = 62.1 bits (144), Expect = 4e-10
Identities = 32/66 (48%), Positives = 40/66 (60%)
Frame = +3
Query: 57 MFSSLLDAARNSPFRGPLSPAQCQSTVAPVAIEQTGGMAASAAVPTESCEFGSPKYFALC 236
MFS + A+NS PLS A+C S V + + + ASAA SCEFGS KY+ALC
Sbjct: 1 MFSRYFETAKNSTLGDPLSVAKCPSDVR--SHRNSSRLMASAAGEQHSCEFGSAKYYALC 58
Query: 237 GVGGVL 254
G GG+L
Sbjct: 59 GFGGIL 64
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 284 PLDLVKCRLQV-DAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEV 460
PLD+V+ RL + +KY ++N F R+EG+R +G+ PT IG F YE
Sbjct: 9 PLDMVRARLAITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYET 68
Query: 461 FKVAYAGMLD 490
K A+ D
Sbjct: 69 CKKAFGEFYD 78
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 46.0 bits (104), Expect = 3e-05
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Frame = +2
Query: 254 ACGLTHTAVVPLDLVKCRLQVDAE----KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGY 421
A + + PLD+V+ R+Q++ KY + +GFKV VR EG GL KG P +
Sbjct: 691 AGAVAQSGTYPLDVVRRRMQMERGEGMFKYSSTWDGFKVIVRSEGFIGLFKGMWPNLLKV 750
Query: 422 SMQGLCKFGFYEVFKVA-YAGM 484
+ +F YEV K A YA M
Sbjct: 751 APTIGIQFAVYEVSKSAMYARM 772
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 46.0 bits (104), Expect = 3e-05
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Frame = +2
Query: 272 TAVVPLDLVKCRLQ-----VDAEK-YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQG 433
TAV P+DLVK R+Q ++AEK YKN ++ F VR EG GL +G P +G S +
Sbjct: 929 TAVYPIDLVKTRMQNQRAVLEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLLGVSPEK 988
Query: 434 LCKFGFYEVFKVAYAGMLDDETAYTTVP 517
K + + G+ D+ + ++P
Sbjct: 989 AIKLTTNDFVR----GIFSDDDGFISLP 1012
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 44.8 bits (101), Expect = 7e-05
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +2
Query: 260 GLTHTAVVPLDLVKCRLQVDAEKYK--NVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQG 433
G++ TA PLD +K LQV A +V+GFK+ +RE G++ L +G I + +
Sbjct: 148 GVSRTATAPLDRLKVLLQVQASSTNRFGIVSGFKMMLREGGIKSLWRGNGANVIKIAPES 207
Query: 434 LCKFGFYEVFK 466
KF YE K
Sbjct: 208 GIKFFAYEKAK 218
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +2
Query: 266 THTAVVPLDLVKCRLQV-DAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCK 442
+ T++ PL+++K RL + +Y+ +++ V ++EG+R +G P+ +G
Sbjct: 244 SQTSIYPLEVLKTRLAIRKTGQYRGLLHAASVIYQKEGIRSFYRGLFPSLLGIIPYAGID 303
Query: 443 FGFYEVFKVAYAGMLDDETA 502
YE K Y +++A
Sbjct: 304 LAVYETLKNFYLNYHKNQSA 323
Score = 35.9 bits (79), Expect = 0.032
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = +2
Query: 251 SACGLTHTAVVPLDLVKCRLQVDAEKY-----KNVVNGFKVSVREEGVRGLAKGWAPTFI 415
S CG A PL LV+ RLQ A + N+V+ + + E+G +GL +G AP F+
Sbjct: 338 STCG--QLASYPLSLVRTRLQAQAREKGGGQGDNMVSVLRKIITEDGFKGLYRGLAPNFL 395
>SB_22047| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 421
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 272 TAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTF 412
T P D++K R+ + Y+ V F ++V EG+ L KGW PT+
Sbjct: 316 TISTPADVIKTRIMNNPSGYQGAVECFMLAVHREGLLSLYKGWLPTW 362
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 8/49 (16%)
Frame = +2
Query: 284 PLDLVKCRLQVDAEKY--------KNVVNGFKVSVREEGVRGLAKGWAP 406
P DLVK ++Q++ + + + F+ V + G RGL KGW P
Sbjct: 151 PTDLVKVQMQMEGRRLSFYPISSVRGTFHAFRNIVDKYGFRGLWKGWLP 199
>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
Length = 233
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +2
Query: 284 PLDLVKCRLQVDAEK--YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYE 457
P +L+K RLQV + Y ++ F +R EGVRGL KG+ + G G C YE
Sbjct: 35 PANLIKIRLQVQRKTTLYNGSLDAFTKVIRTEGVRGLYKGYLVSCAGL-FAGQCYITTYE 93
Query: 458 VFK 466
+ +
Sbjct: 94 LVR 96
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Frame = +2
Query: 254 ACGLTHTAVVPLDLVKCRLQV-----DAEKYKNVVNGFKVSVREEGVR-GLAKGWAPTFI 415
A ++ T PLD+V+ R+Q+ D KY +N +++G+R GL +G + ++
Sbjct: 182 AGAVSQTIAYPLDVVRRRMQLAGAVPDGHKYNTCINTLVNVYKDDGIRRGLYRGLSINYL 241
Query: 416 GYSMQGLCKFGFYEVFK 466
Q FG YEV K
Sbjct: 242 RVCPQVAIMFGVYEVTK 258
Score = 37.1 bits (82), Expect = 0.014
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Frame = +2
Query: 251 SACGLTHTAVV-PLDLVKCRL--QVDAEK-YKNVVNGFK-VSVREEGVRGLAKGWAPTFI 415
S G+T A PLD+V+ RL QV ++ Y + + +SV+E G + L KG+ PT +
Sbjct: 72 SLAGMTACACTYPLDMVRSRLAFQVAQDQGYTTITQTIRCISVKEGGPKALYKGFVPTLL 131
Query: 416 GYSMQGLCKFGFYEVFKVAYAGMLDDETAYT 508
++ GFY +F+ A L+ A+T
Sbjct: 132 --TIVPAMGIGFY-MFETMKAYFLETRIAFT 159
>SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 200
Score = 38.3 bits (85), Expect = 0.006
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Frame = +2
Query: 266 THTAVVPLDLVKCRLQV-----DAEKYKNVVNGFKVSVREEGV-RGLAKGWAPTFIGYSM 427
+ T PLD+V+ R+Q+ D KY +N F E+G+ RGL +G + ++
Sbjct: 120 SQTLAYPLDVVRRRMQLAGTVADGHKYSTCINTFISVYTEDGIRRGLYRGLSINYLRVCP 179
Query: 428 QGLCKFGFYEVFK 466
Q F YEV K
Sbjct: 180 QVAVMFAVYEVVK 192
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = +2
Query: 254 ACGLTHTAVVPLDLVKCRLQVDAEK----YKNVVNGFKVSVREEGVRGLAKGWAPTFI 415
A ++ TA PLD+V+ R+Q+ + YK+ ++ F V+ EG RGL KG P +
Sbjct: 171 AGAVSQTATYPLDVVRRRMQMKGIRADFAYKSTLHAFSSIVKLEGFRGLYKGMWPNIL 228
Score = 35.1 bits (77), Expect = 0.055
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +2
Query: 254 ACGLTHTAVVPLDLVKCRLQVDAE--KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSM 427
A ++ T+V PL+ VK LQ+ + K+K V+ +EEG+ G KG I
Sbjct: 44 AGAVSRTSVSPLERVKILLQIQVKNPKFKGVLPTLIQIGKEEGILGYFKGNGTNVIRIFP 103
Query: 428 QGLCKFGFYEVFKVAYA 478
+F YE +K A
Sbjct: 104 YSAVQFAAYEEYKKGIA 120
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 35.1 bits (77), Expect = 0.055
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Frame = +2
Query: 278 VVPLDLVKCRLQVDAEK-----YKNVVNGFKVSVREEGVRGLAKGWAPTFIG 418
V P +++K RL V YK + + K +REEG+ L KG P+F+G
Sbjct: 170 VYPCEVIKTRLTVQHVNKSNAHYKGMRHALKTILREEGILALYKGVTPSFLG 221
>SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1938
Score = 35.1 bits (77), Expect = 0.055
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 305 RLQVDA-EKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEV 460
R + DA +K GF ++ +EEG L K T YS++GL KF FYEV
Sbjct: 909 RTKPDATDKVYGEFQGFNITYKEEGGGTLYKTADHTKRSYSIKGLKKFTFYEV 961
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 34.3 bits (75), Expect = 0.096
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 13/72 (18%)
Frame = +2
Query: 233 LRSWWCSAC-GLTHTAVV-PLDLVKCRLQVDA-----------EKYKNVVNGFKVSVREE 373
+ S C A G+ AV+ P D++K R+QV ++Y V + F+ ++EE
Sbjct: 30 IESLTCGALSGMISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCFRTILKEE 89
Query: 374 GVRGLAKGWAPT 409
G GL KG AP+
Sbjct: 90 GAMGLFKGLAPS 101
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 33.9 bits (74), Expect = 0.13
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 15/76 (19%)
Frame = +2
Query: 284 PLDLVKCRLQVDAEK--------------YKNVVN-GFKVSVREEGVRGLAKGWAPTFIG 418
P+++VK R+Q+D E YK ++ G REEGVRGL +G P +
Sbjct: 26 PIEVVKIRMQLDNELGSKHNSKDIFRERYYKGLIRTGLSRVYREEGVRGLYRGIFPALLR 85
Query: 419 YSMQGLCKFGFYEVFK 466
++ + G YE K
Sbjct: 86 QAIYSSTRLGAYEPIK 101
Score = 31.5 bits (68), Expect = 0.68
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = +2
Query: 260 GLTHTAVV-PLDLVKCRLQV----DAEKYKNVVNGFKVSVREEGVRGLAKGWAPT 409
G+ +A+ P DLVK R Q + YKN+ + F ++EG GL G PT
Sbjct: 125 GVIGSAIATPTDLVKIRFQAVKIGETIPYKNMFHAFYKIAKKEGFLGLWTGMKPT 179
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 8/83 (9%)
Frame = +2
Query: 260 GLTHTAVV-PLDLVKCRLQVDAEK-------YKNVVNGFKVSVREEGVRGLAKGWAPTFI 415
G T V P+D+V+ R + Y+ ++ +VR EG+ L KG+ P +
Sbjct: 222 GFVATCVASPVDIVRTRFMTQPKDTKGRPLVYQGTLDCIYKTVRHEGILALYKGFFPNWT 281
Query: 416 GYSMQGLCKFGFYEVFKVAYAGM 484
+ + F YE + YAG+
Sbjct: 282 RTGLDTIIIFFVYERLR-RYAGL 303
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 33.9 bits (74), Expect = 0.13
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Frame = +2
Query: 251 SACGLTHTAVV-PLDLVKCRLQVDAEKYKNVVN--GFKVSVR----EEGVRGLAKGWAPT 409
+ G+ TA PLD+V+ RL V +++ N G ++R EEG+RGL KG P+
Sbjct: 36 ATAGVVATASTHPLDVVRARLTVQDMSTRSISNYTGIVSALRRIHIEEGIRGLYKGLVPS 95
Query: 410 FIGYSMQGLCKFGFYEVFKV 469
+ + + Y++ K+
Sbjct: 96 LVSIAPFLGVQQSVYDIMKL 115
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 33.1 bits (72), Expect = 0.22
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Frame = +2
Query: 266 THTAVVPLDLVKCRLQ----VDAE-KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQ 430
T A +P+D+ K R+Q +D + +YK ++ VR EGV L KG+ P +
Sbjct: 107 TTVASMPVDIAKTRIQNMRIIDGKPEYKGTMDVLARIVRNEGVFALWKGFTPYYFRIGPH 166
Query: 431 GLCKFGFYE 457
+ F F E
Sbjct: 167 TVLTFIFLE 175
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = +2
Query: 266 THTAVVPLDLVKCRLQVD----AEKYKNVVNGFKVSVREEGVRGLAKGWAPT 409
T + PLD VKC LQ++ Y V+ + RE GVRG+ KG + T
Sbjct: 151 TSFVLTPLDRVKCILQIEKAFGGSSYGGPVDCLRRIYREAGVRGVYKGISVT 202
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +2
Query: 254 ACGLTHTAVVPLDLVKCRLQVDAEKYKNVVNGFKV---SVREEGVRGLAKGWAPTFIGYS 424
A + HT PL +K RLQ++ + + FK+ + + EG+R +G +++G S
Sbjct: 844 AAFINHTVTNPLWFIKTRLQLENQGGTR-ASAFKIVSMAYKAEGIRAFYRGLTASYVGIS 902
Query: 425 MQGLCKFGFYEVFK 466
+ + F YE K
Sbjct: 903 -ETVVHFTIYERLK 915
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +2
Query: 284 PLDLVKCRLQVDAEKYKNVVNGFKVSVR----EEGVRGLAKGWAPTFI 415
P + +KC LQV+A + +G V+ EEGVRG+ +G PT I
Sbjct: 140 PAERIKCILQVEAGASGSTQSGPYAIVKRIYAEEGVRGIFRGLPPTMI 187
Score = 32.3 bits (70), Expect = 0.39
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 7/45 (15%)
Frame = +2
Query: 284 PLDLVKCRLQV-------DAEKYKNVVNGFKVSVREEGVRGLAKG 397
PLDL+K RLQ + +K ++ F +VR EG+RGL KG
Sbjct: 40 PLDLLKVRLQAMNQVKPGETAPFKGAMDCFMKTVRLEGLRGLYKG 84
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 32.7 bits (71), Expect = 0.29
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = +2
Query: 278 VVPLDLVKCRLQVDAEK-----YKNVVNGFKVSVREEGVRGLAKGWAPTFI 415
V P +++K RL V YK + + K +REEG+ L KG P+F+
Sbjct: 439 VYPCEVIKTRLTVQHVNKSNAHYKGMRHALKTILREEGILALYKGVTPSFL 489
>SB_19190| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1829
Score = 31.1 bits (67), Expect = 0.90
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -3
Query: 244 PTPQRAKYLGDPNSQDSVGTAADAAMPPVCSIATGATVDWHWAGDSG 104
P P RA L P + S G+ A+ A PP +ATG + + SG
Sbjct: 816 PPPGRASQL--PLQEQSSGSRAEEASPPPALVATGPSASYRLPNASG 860
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 272 TAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW-APTFI 415
TA PLD +K RLQ A ++ +V+ EGVRGL KG AP +
Sbjct: 85 TAGQPLDTIKVRLQ--ASFGAGPLDMLARTVKTEGVRGLYKGMLAPVLV 131
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +2
Query: 275 AVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW 400
A+ P++++K RLQ+ Y+ V++ +EEG+R + +
Sbjct: 14 AMNPIEVIKQRLQMYGSPYRGVIHCATSVFKEEGIRAFYRSY 55
>SB_26166| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 612
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = +2
Query: 284 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYE 457
P D+VK RLQ++ Y + + G+ GL +G P + ++ + YE
Sbjct: 543 PADVVKTRLQMNPYMYPSNRAAVVAIIEAGGIEGLFRGLVPRTVRRTLMSAMAWTIYE 600
>SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17)
Length = 187
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Frame = +2
Query: 284 PLDLVKCRLQVDAEK---------YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGL 436
PL++VK R+Q+ E Y+NV + + EG+ + KG P I +
Sbjct: 24 PLEVVKTRMQLQGELKSRGTYSVYYRNVFHASYTIAKYEGILAMQKGLFPALIYQVIMNG 83
Query: 437 CKFGFYEV 460
+ G Y++
Sbjct: 84 TRLGSYQI 91
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +2
Query: 284 PLDLVKCRLQVDAE----KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGL 436
P D++K R+Q D +YK +++ S +EEG+ +G PT + +Q L
Sbjct: 152 PFDVIKSRIQADGNLGKFRYKGMMDCALQSYKEEGMIVFTRGIWPTLLRGFLQVL 206
>SB_402| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -3
Query: 211 PNSQDSVGTAADAAMPPVCSIATGATVDWHWAGD-SGPRNGEFRAASSNEENIIM 50
P Q T A PPV +G+ D W GD S P+ + R+ N +M
Sbjct: 398 PQPQKPPATRPSATPPPVTGDESGSDYDEDWGGDWSEPKPTQSRSIVGEMRNDLM 452
>SB_25940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 125 PVDGRARGYRADRWHGGVCCG 187
P +G+ RG+R GGVCCG
Sbjct: 91 PREGQIRGFRFVHISGGVCCG 111
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 8/69 (11%)
Frame = +2
Query: 284 PLDLVKCRLQVDAEK--------YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLC 439
P+DL K ++QV + Y+NV + + G+RG +G + T +
Sbjct: 221 PIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQGLSATLVRNIPANGF 280
Query: 440 KFGFYEVFK 466
FGFYE K
Sbjct: 281 FFGFYEFTK 289
>SB_28356| Best HMM Match : AAA_5 (HMM E-Value=0)
Length = 1737
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = -3
Query: 301 LHQVEGHHGRVGQTACRTPPTPQRAKYLGDPNSQDSVGTAADAAMP 164
LH++ HH +G+ R + +LG+ + Q + AD MP
Sbjct: 268 LHRLYPHHLMLGEEGQRVVEDTLKTFHLGEKSEQPQSSSVADVTMP 313
>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +2
Query: 284 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFY 454
P D +K ++Q KN ++ + ++EG +GL G P+ + F FY
Sbjct: 29 PFDTIKVKMQTFPSMSKNALDCGIKTFKQEGFKGLYAGTIPSLAANIAENSFLFLFY 85
>SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +3
Query: 123 CQSTVAPVAIEQTGGMAASAAVPTES 200
C ST PV +QT A+SA VPT S
Sbjct: 154 CLSTARPVTTQQTKKPASSAFVPTTS 179
>SB_44046| Best HMM Match : P19Arf_N (HMM E-Value=5.5)
Length = 337
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +2
Query: 455 EVFKVAYAGMLDDETAYTTVPSCTWRRL--RRRNSSPTLP 568
EVF+ + G+ D PS W+RL RN+ P LP
Sbjct: 113 EVFREEWDGVASDAAIEQAHPSDMWKRLVEHHRNNYPQLP 152
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = +2
Query: 248 CSACGLTHTAVVPLDLVKCRLQV-----DAEKYKNVVNGFKVSVREEGVRGLAKGWAPTF 412
C A AV PLD++K RLQ+ Y +++ K EG+ KG P
Sbjct: 213 CLAGMTASVAVNPLDVIKTRLQLLNRPQGEPNYNGIIDCAKKIYSNEGLAAFYKGAVPRM 272
Query: 413 I 415
I
Sbjct: 273 I 273
>SB_43261| Best HMM Match : TSP_1 (HMM E-Value=0.0026)
Length = 649
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1
Query: 532 ASASAEFIADIALSPMEAAKVRIQTMPGFASTLRERGRRWSRTKVTARSTRPGCR 696
A A AE ++A +P +V ++T S L G+R ++ +TRPG R
Sbjct: 494 AVAVAELGHELAHAPTRNPQVAVKTAWEMPSRLGSAGKRHAQLTAAGVTTRPGLR 548
>SB_48488| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 386 LAKGWAPTFIGYSMQGLCKFGFYEVFKV 469
L KGW T ++M G K+G E+ K+
Sbjct: 123 LLKGWGATSFEHAMIGAAKYGHIEIVKL 150
>SB_18294| Best HMM Match : Ctr (HMM E-Value=0.0092)
Length = 267
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +2
Query: 404 PTFIGYSMQGLCKFGFYEVFK-VAYAGMLDDETAYTTV 514
P+ +GYS++ C FGF K V+ + ++DD T+ T+
Sbjct: 29 PSPVGYSIRVSCSFGFIVTLKNVSGSLVIDDMTSSETL 66
>SB_10272| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = +2
Query: 68 VARCGAELSVPWPTIARPVPVDGRARGYRADRWHGGVCCGTHGVL 202
+ RCG + W +P P++GR R W G C +L
Sbjct: 338 IRRCGTH-APGWMVGRQPSPIEGRVRRTVCFNWAGNCCKWRQNIL 381
>SB_35895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 534 VCVGGIHRRHCPVAHGGG*GPYPN 605
+C+G + HC A GG PYP+
Sbjct: 134 LCIGNHEKAHCSAALGGPKYPYPH 157
>SB_16794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1407
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Frame = +2
Query: 545 RNSSPTLPCRPWRRLRSVS----KPC--LVSRAPSASVAEDGQERRLRHVLQGLV 691
RNS RP ++LRS++ PC +S A +++ E+G+ +L +LQG +
Sbjct: 1129 RNSEEARTDRPSQQLRSLNGEWDAPCSGALSAAGNSARTEEGRPTQLAEILQGKI 1183
>SB_59334| Best HMM Match : zf-AN1 (HMM E-Value=0.72)
Length = 1161
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/75 (21%), Positives = 27/75 (36%)
Frame = -3
Query: 274 RVGQTACRTPPTPQRAKYLGDPNSQDSVGTAADAAMPPVCSIATGATVDWHWAGDSGPRN 95
R G+ + P R + P S+ A C + A+ + AG GP
Sbjct: 747 RYGEWRHKKPGYEWRPEAAWGPKKSGSLAREPSTAPSLFCDLVAAASAKMYLAGQGGPGK 806
Query: 94 GEFRAASSNEENIIM 50
E+ + NI++
Sbjct: 807 TEWAVSMFRGRNIVV 821
>SB_51941| Best HMM Match : fn3 (HMM E-Value=2.1e-11)
Length = 155
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 305 RLQVDA-EKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEV 460
R + DA +K GF ++ +EEG L K T + GL KF +YEV
Sbjct: 78 RTKPDATDKIYGEFQGFNITYKEEGGGTLYKTTNHTTRSCIITGLKKFTYYEV 130
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,170,197
Number of Sequences: 59808
Number of extensions: 517657
Number of successful extensions: 1756
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1750
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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