Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021824
         (826 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    62   7e-12
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    25   0.96 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    25   0.96 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    25   0.96 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    25   0.96 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    24   1.3  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    23   2.9  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   2.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.9  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    23   3.9  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   3.9  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    23   3.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.8  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    21   9.0  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    21   9.0  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    21   9.0  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   9.0  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    21   9.0  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 61.7 bits (143), Expect = 7e-12
 Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
 Frame = +1

Query: 502 CSLVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS----ADV 669
           C ++V TPGR+ D + R  +  N++K FVLDEAD ML  GF   + ++    S     + 
Sbjct: 286 CHILVATPGRLKDFVNRGNVSFNSLKYFVLDEADRMLDMGFLGDVEEMLSHQSMPATGER 345

Query: 670 QVILLSATMPDDVLEVSRCFMRDPVRILV 756
           Q ++ SAT P++V +++  F+ + + I V
Sbjct: 346 QTLMFSATFPEEVQQLAGKFLLNYIFIAV 374



 Score = 41.9 bits (94), Expect = 6e-06
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
 Frame = +2

Query: 257 GRDVIAQAQSGTGKTATFSISILQQI---------DTSIRECQALILAPTRELAQQIQKV 409
           GRD+++ AQ+G+GKTA F + I+  +         + +  +   +I++PTRELA QI   
Sbjct: 195 GRDLMSCAQTGSGKTAAFMLPIIHNLLSDKNPPNTENNCAQPVVVIMSPTRELAIQIADQ 254

Query: 410 VIALGDHLNAKCHACIGGTNVREDIRQLESGVH 508
                 +   K     GGT+      ++  G H
Sbjct: 255 GKKFAYNSTVKVAVIYGGTSTNHQRGRILGGCH 287



 Score = 28.7 bits (61), Expect = 0.059
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +3

Query: 144 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 242
           + +F+   L+  LL  +   G+ KP+AIQ+ AI
Sbjct: 157 ITSFETSGLRPHLLENVKKSGYTKPTAIQKYAI 189


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +1

Query: 316  IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 420
            ID + +  +   MS+   G H   G    EGGD S
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +1

Query: 316  IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 420
            ID + +  +   MS+   G H   G    EGGD S
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +1

Query: 316  IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 420
            ID + +  +   MS+   G H   G    EGGD S
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +1

Query: 316  IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 420
            ID + +  +   MS+   G H   G    EGGD S
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = -1

Query: 493 QLANIFTDIGATNASMAFSIQVITKSYHHLLNLLGQLSCGSQDQSLTF 350
           Q+AN  TD  +   S+A S  +++   H L +    +  G+Q    +F
Sbjct: 207 QMANYSTDYSSLTHSLAASNHLLSSGQHLLQDTYKSMLPGAQTVGASF 254


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 457 WWHQCP*RYSPTGEWCS 507
           WW +   +Y P GE+ S
Sbjct: 96  WWQELQEKYDPKGEYKS 112


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 367 PGSHKRAGPTNSEGGDSSW 423
           PG+ K+ GP +     +SW
Sbjct: 28  PGAKKKVGPIDQSAAAASW 46


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 367 PGSHKRAGPTNSEGGDSSW 423
           PG+ K+ GP +     +SW
Sbjct: 28  PGAKKKVGPIDQSAAAASW 46


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +1

Query: 457 WWHQCP*RYSPTG 495
           WW++   +Y PTG
Sbjct: 98  WWNELEAKYDPTG 110


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 401 QKVVIALGDHLNAKCHAC 454
           +K  IAL D  N  CH C
Sbjct: 261 EKSWIALNDDYNRLCHLC 278


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +1

Query: 457 WWHQCP*RYSPTG 495
           WW++   +Y PTG
Sbjct: 98  WWNELEAKYDPTG 110


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 7/55 (12%)
 Frame = +3

Query: 9    MSYSSERRSEDWP-----EDSKNGPSKDQGSYDGP--PGMDPGTLDTDWDQVVET 152
            + ++ ER+  DWP     E+ K G      S+  P  P   P +    W     T
Sbjct: 1135 LHWNKERKICDWPKSAKCEEKKPGHKPSTSSWQKPTKPSYRPPSTTNHWQTKTTT 1189


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 5/16 (31%), Positives = 10/16 (62%)
 Frame = +1

Query: 454 HWWHQCP*RYSPTGEW 501
           +WW +   ++ P GE+
Sbjct: 96  NWWQELESKFDPQGEY 111


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 5/16 (31%), Positives = 10/16 (62%)
 Frame = +1

Query: 454 HWWHQCP*RYSPTGEW 501
           +WW +   ++ P GE+
Sbjct: 96  NWWQELEAKFDPKGEY 111


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 5/16 (31%), Positives = 10/16 (62%)
 Frame = +1

Query: 454 HWWHQCP*RYSPTGEW 501
           +WW +   ++ P GE+
Sbjct: 96  NWWQELESKFDPQGEY 111


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 105 FPEVHRNYLDPSMAHFW 55
           F +V R+Y DP   ++W
Sbjct: 141 FVKVPRHYDDPGKGNYW 157


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/37 (24%), Positives = 20/37 (54%)
 Frame = -3

Query: 176 FFEVHVIEGFDNLIPVGVKCPRVHSRRSIVTTLILRW 66
           FF+ ++I G +N + + V    + +  + +T  +L W
Sbjct: 43  FFKKNLIVGSENCLVLNVYTKNLRTDTNRITQPVLFW 79


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,607
Number of Sequences: 336
Number of extensions: 4780
Number of successful extensions: 26
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22621642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)