Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021824
         (826 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    52   2e-08
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    28   0.40 
AY344837-1|AAR05808.1|  221|Anopheles gambiae TEP4 protein.            25   2.8  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   8.6  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    23   8.6  
AY344838-1|AAR05809.1|  221|Anopheles gambiae TEP4 protein.            23   8.6  
AY344836-1|AAR05807.1|  221|Anopheles gambiae TEP4 protein.            23   8.6  
AF203333-1|AAF19828.1|  119|Anopheles gambiae immune-responsive ...    23   8.6  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 52.0 bits (119), Expect = 2e-08
 Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
 Frame = +1

Query: 502 CSLVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS----ADV 669
           C ++V TPGR+ D I R  +    +   VLDEAD ML  GF   I  V    +       
Sbjct: 300 CHVLVATPGRLLDFIDRGYVTFENVNFVVLDEADRMLDMGFLPSIEKVMGHATMPEKQQR 359

Query: 670 QVILLSATMPDDVLEVSRCFMRDPVRILV 756
           Q ++ SAT P ++ E++  F+ + + + V
Sbjct: 360 QTLMFSATFPAEIQELAGKFLHNYICVFV 388



 Score = 48.4 bits (110), Expect = 3e-07
 Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
 Frame = +2

Query: 257 GRDVIAQAQSGTGKTATFSISIL-------QQIDTSIRECQALILAPTRELAQQIQKVVI 415
           GRD++A AQ+G+GKTA F + ++         ++   R    +I+APTRELA QI     
Sbjct: 211 GRDLMACAQTGSGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGR 270

Query: 416 ALGDHLNAKCHACIGGTNVREDIRQLESGVH 508
                   K     GGT V+  ++ +  G H
Sbjct: 271 KFAHGTKLKVCVSYGGTAVQHQLQLMRGGCH 301



 Score = 28.7 bits (61), Expect = 0.23
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +3

Query: 144 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 242
           VE+F+   L+EE++  +    + KP+ IQ+ AI
Sbjct: 173 VESFERSGLREEVMTNVRKSSYTKPTPIQRYAI 205


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.9 bits (59), Expect = 0.40
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = -1

Query: 517 PPPMNTTLQLANIFTDIGATNASMAFSIQVITKSYHHLLNLLGQLS 380
           PPP  + L   +I T + A  A+ + SI     SYH  +  +G L+
Sbjct: 620 PPPPGSALGHPSIPTSLAAAAAAYSHSIASTMSSYHSSMAHIGGLN 665


>AY344837-1|AAR05808.1|  221|Anopheles gambiae TEP4 protein.
          Length = 221

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 18  SSERRSEDWPEDSKNGPSKDQGSY 89
           ++++ + D    SKNGPS  Q S+
Sbjct: 95  ANDQTARDGSSSSKNGPSNSQASF 118


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +3

Query: 282 SQELEKLLLSLYRFYNKSIQAFVNV 356
           S++ E+L+  L+R YNK I+   N+
Sbjct: 24  SEDEERLVRDLFRGYNKLIRPVQNM 48


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = -3

Query: 419 ELSPPSEFVGPALLWEPGSKLDIHECLYRF 330
           E SP S F G    W+ G       CL+ F
Sbjct: 394 ENSPKSAFTGRIEFWDGGRDFCFLICLFSF 423


>AY344838-1|AAR05809.1|  221|Anopheles gambiae TEP4 protein.
          Length = 221

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 18  SSERRSEDWPEDSKNGPSKDQGSY 89
           ++++ + D    SKNGPS  Q S+
Sbjct: 95  ANDQTARDGSASSKNGPSNSQVSF 118


>AY344836-1|AAR05807.1|  221|Anopheles gambiae TEP4 protein.
          Length = 221

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 18  SSERRSEDWPEDSKNGPSKDQGSY 89
           ++++ + D    SKNGPS  Q S+
Sbjct: 95  ANDQTARDGSASSKNGPSNSQVSF 118


>AF203333-1|AAF19828.1|  119|Anopheles gambiae immune-responsive
          alpha-macroglobulinand complement C3-related protein
          IMCR14 protein.
          Length = 119

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 18 SSERRSEDWPEDSKNGPSKDQGSY 89
          ++++ + D    SKNGPS  Q S+
Sbjct: 24 ANDQTARDGSASSKNGPSNSQVSF 47


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 920,434
Number of Sequences: 2352
Number of extensions: 20445
Number of successful extensions: 120
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 119
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87734433
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)