Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021822
         (840 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    23   2.3  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   9.2  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   9.2  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   9.2  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   9.2  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   9.2  

>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 90  RNASPPSSTASRYQILRLGSNTTTRSNKASPPV 188
           +N S P  T +    + + +NT+T S+ +SP V
Sbjct: 144 KNKSAPILTKTSPTPVSINNNTSTSSSASSPSV 176


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 211 IPQVLRE*TGGEALFDLVVVLDPSLKIWYLD 119
           +P+ LR   GG+ L     ++DP LK   LD
Sbjct: 115 VPRKLRLADGGKTLEINYKLIDPDLKELNLD 145


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -1

Query: 216 KTSPKFSVNRLEERPCSTSLLYWIPVSRSG 127
           K SP+     LEE      + +W   +R+G
Sbjct: 434 KLSPELKAGSLEEISVKRFVKFWTNFARNG 463


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -1

Query: 216 KTSPKFSVNRLEERPCSTSLLYWIPVSRSG 127
           K SP+     LEE      + +W   +R+G
Sbjct: 436 KLSPELKAGSLEEISVKRFVKFWTNFARNG 465


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -1

Query: 216 KTSPKFSVNRLEERPCSTSLLYWIPVSRSG 127
           K SP+     LEE      + +W   +R+G
Sbjct: 434 KLSPELKTGSLEEISVKRFVKFWTNFARNG 463


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -1

Query: 216 KTSPKFSVNRLEERPCSTSLLYWIPVSRSG 127
           K SP+     LEE      + +W   +R+G
Sbjct: 436 KLSPELKTGSLEEISVKRFVKFWTNFARNG 465


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,699
Number of Sequences: 336
Number of extensions: 3420
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23140487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)