Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021822
(840 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0272 - 16278136-16278289,16278873-16278970,16279090-162792... 101 9e-22
06_03_0627 + 22903346-22903523,22906010-22906152,22906235-229066... 51 1e-06
01_05_0545 + 23109920-23110040,23113363-23113505,23113626-231140... 48 9e-06
06_01_1105 + 9102059-9102167,9103770-9103907,9104125-9104267,910... 47 2e-05
11_01_0550 + 4355857-4356051,4357287-4357355,4357429-4357561,435... 41 0.001
04_04_0154 - 23146445-23146535,23146689-23146795,23146933-231469... 41 0.001
12_01_0497 + 3946179-3946322,3947274-3947342,3948733-3948829,395... 39 0.004
08_02_0717 + 20372728-20372836,20372936-20373078,20374131-203742... 39 0.006
02_01_0550 + 4044683-4044784,4044862-4044975,4045277-4045360,404... 39 0.006
04_04_0660 - 27017692-27017928,27018101-27018250,27018337-270184... 38 0.013
08_02_0811 + 21438848-21439001,21439469-21439662,21439769-214398... 37 0.023
07_01_0637 + 4767021-4767083,4767175-4767249,4767339-4767500,476... 37 0.023
02_05_0131 + 26098459-26098668,26098788-26098863,26101972-261021... 36 0.030
02_05_0127 - 26053055-26053306,26055415-26055564,26055657-260557... 36 0.053
07_03_1752 - 29218348-29218524,29218593-29218736,29218957-292191... 34 0.12
04_04_0950 + 29609484-29611025 30 2.0
02_03_0151 - 15759254-15760459 29 4.6
>09_04_0272 -
16278136-16278289,16278873-16278970,16279090-16279230,
16279701-16279865,16279941-16280117,16280330-16280510,
16280784-16280829,16281178-16281241,16281331-16281353,
16281964-16282036,16282410-16282541,16283343-16283429,
16283488-16283700
Length = 517
Score = 101 bits (241), Expect = 9e-22
Identities = 43/84 (51%), Positives = 61/84 (72%)
Frame = +2
Query: 2 FGGKIIEREGYFVEPTIITGLPHDSPIVKTECFAPIVYCIEIPDLETGIQYNNEVEQGLS 181
+GG IE EG FV+PTI+ P +P+V+ E F P++Y +++ +L+ ++ NN V QGLS
Sbjct: 393 YGGSAIESEGNFVQPTIVEISP-SAPVVREELFGPVLYVMKVQNLKEAVEINNSVPQGLS 451
Query: 182 SSLFTENLGDVFKWIGPHGSDCGI 253
SS+FT+ +FKWIGPHGSDCGI
Sbjct: 452 SSIFTKRPDIIFKWIGPHGSDCGI 475
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/40 (52%), Positives = 22/40 (55%)
Frame = +1
Query: 256 NVNIPTNGAEVXXXXXXXXXXXXXXXXXSDSWKNYMRRAT 375
NVNIPTNGAE+ SDSWK YMRRAT
Sbjct: 477 NVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRAT 516
>06_03_0627 +
22903346-22903523,22906010-22906152,22906235-22906618,
22906980-22907069,22907147-22907320,22907414-22907551,
22907719-22907856,22907958-22908019,22908240-22908513
Length = 526
Score = 51.2 bits (117), Expect = 1e-06
Identities = 22/67 (32%), Positives = 38/67 (56%)
Frame = +2
Query: 5 GGKIIEREGYFVEPTIITGLPHDSPIVKTECFAPIVYCIEIPDLETGIQYNNEVEQGLSS 184
GGK ++GY++EPTI T + D I + E F P++ ++ +E I+ N GL++
Sbjct: 395 GGKPCGKKGYYIEPTIFTNVKDDMVIAREEIFGPVMCLMKFKTVEEAIERANGTRYGLAA 454
Query: 185 SLFTENL 205
L T ++
Sbjct: 455 GLVTRDI 461
>01_05_0545 +
23109920-23110040,23113363-23113505,23113626-23114009,
23114106-23114219,23114310-23114483,23114608-23114745,
23114884-23115021,23115094-23115155,23115268-23115541
Length = 515
Score = 48.0 bits (109), Expect = 9e-06
Identities = 21/67 (31%), Positives = 38/67 (56%)
Frame = +2
Query: 5 GGKIIEREGYFVEPTIITGLPHDSPIVKTECFAPIVYCIEIPDLETGIQYNNEVEQGLSS 184
GGK +GY++EPTI + + I + E F P++ ++ +E I+ N + GL++
Sbjct: 384 GGKPTGDKGYYIEPTIFVDVKEEMTIAQEEIFGPVMSLMKFKTVEEAIEKANCTKYGLAA 443
Query: 185 SLFTENL 205
+ T+NL
Sbjct: 444 GIVTKNL 450
>06_01_1105 +
9102059-9102167,9103770-9103907,9104125-9104267,
9104362-9104515,9104610-9104839,9105382-9105471,
9105606-9105779,9105873-9106010,9106212-9106349,
9106450-9106511,9106744-9106972,9108531-9109364
Length = 812
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/67 (31%), Positives = 38/67 (56%)
Frame = +2
Query: 5 GGKIIEREGYFVEPTIITGLPHDSPIVKTECFAPIVYCIEIPDLETGIQYNNEVEQGLSS 184
GG + +GY+++PTI + + + I + E F P+ ++ DL I+ N + GL++
Sbjct: 418 GGDRLGDKGYYIQPTIFSDVQDNMRIAQEEIFGPVQSILKFNDLNEVIKRANASQYGLAA 477
Query: 185 SLFTENL 205
+FT NL
Sbjct: 478 GVFTNNL 484
>11_01_0550 +
4355857-4356051,4357287-4357355,4357429-4357561,
4358248-4358454,4358601-4358716,4358814-4358918,
4359008-4359180,4359273-4359363,4359682-4359831,
4359928-4360173
Length = 494
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/67 (26%), Positives = 40/67 (59%)
Frame = +2
Query: 2 FGGKIIEREGYFVEPTIITGLPHDSPIVKTECFAPIVYCIEIPDLETGIQYNNEVEQGLS 181
+GG+ E++ + PT++ +P D+ ++ E F P++ + + +E IQ+ N + L+
Sbjct: 324 YGGQTDEKQ-LKIAPTVLLDVPLDTTLMAEEIFGPLLPIVTVDKIEDSIQFINSRTKPLA 382
Query: 182 SSLFTEN 202
+ LFT++
Sbjct: 383 AYLFTKD 389
>04_04_0154 -
23146445-23146535,23146689-23146795,23146933-23146993,
23147070-23147221,23147306-23147383,23147696-23147809,
23147880-23147956,23148128-23148194,23148341-23148406,
23148528-23148651,23148733-23148825,23149446-23149594,
23149681-23149761,23150502-23150644,23150758-23150872
Length = 505
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +2
Query: 23 REGYFVEPTIITGLPHDSPIVKTECFAPIVYCIEIPDLETGIQYNNEVEQGLSSSLFTEN 202
+ G+F+EPTIIT + I + E F P++ E ++ N+ GL+ ++ + +
Sbjct: 372 KRGFFIEPTIITNVSTSMQIWREEVFGPVICVKEFRTEREAVELANDTHYGLAGAVISND 431
Query: 203 L 205
L
Sbjct: 432 L 432
>12_01_0497 +
3946179-3946322,3947274-3947342,3948733-3948829,
3951827-3952033,3952149-3952264,3953189-3953293,
3953380-3953552,3953647-3953737,3953869-3954018,
3954482-3954724
Length = 464
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +2
Query: 2 FGGKIIEREGYFVEPTIITGLPHDSPIVKTECFAPIVYCIEIPDLETGIQYNNEVEQGLS 181
FGG+ E + + PTI +P DS I+K E F P++ I + + N + + L+
Sbjct: 295 FGGQRDEHQ-LKIAPTIFMDVPLDSGIMKEEIFGPLLPIITVDKIHESFALINSMTKALA 353
Query: 182 SSLFTEN 202
+ LFT++
Sbjct: 354 AYLFTKD 360
>08_02_0717 +
20372728-20372836,20372936-20373078,20374131-20374211,
20374307-20374510,20374789-20374796,20375153-20375245,
20375377-20375500,20375585-20375650,20375841-20375907,
20376600-20376676,20377032-20377145,20377546-20377623,
20377705-20377856,20377960-20378020,20378292-20378398,
20378497-20378562,20379099-20379177,20379671-20379967
Length = 641
Score = 38.7 bits (86), Expect = 0.006
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +2
Query: 26 EGYFVEPTIITGLPHDSPIVKTECFAPIVYCIEIPDLETGIQYNNEVEQGLSSSLFT 196
+G+++EPTIIT + I + E F P++ E E I+ N+ GL+ ++ +
Sbjct: 392 KGFYIEPTIITDVDTSMQIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVLS 448
>02_01_0550 +
4044683-4044784,4044862-4044975,4045277-4045360,
4045818-4045917,4046923-4046971,4047071-4047158,
4047251-4047361,4047771-4047833,4047942-4048052,
4048517-4048582,4048689-4048766,4049553-4049630,
4049784-4049850,4049930-4050015,4050301-4050333,
4050426-4050458,4050754-4050854,4050986-4051071,
4051478-4051584,4051683-4051839,4051854-4051984
Length = 614
Score = 38.7 bits (86), Expect = 0.006
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = +2
Query: 5 GGKIIEREGYFVEPTIITGLPHDSPIVKTECFAPIVYCIEIPDLETGIQYNNEVEQGLSS 184
GGK F EPT++ + +D + + E F P+ + E I+ N+ GL++
Sbjct: 428 GGKRHSLGMSFYEPTVVGNVSNDMLLFREEVFGPVAPLVPFKTEEDAIRMANDTNAGLAA 487
Query: 185 SLFTENL 205
+FT+++
Sbjct: 488 YIFTKSI 494
>04_04_0660 -
27017692-27017928,27018101-27018250,27018337-27018427,
27018512-27018672,27018783-27019015,27019119-27019325,
27021411-27021507,27021636-27021677,27021802-27022056
Length = 490
Score = 37.5 bits (83), Expect = 0.013
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +2
Query: 8 GKIIEREGYFVEPTIITGLPHDSPIVKTECFAPIVYCIEIPDLETGIQYNNEVEQGLSSS 187
G ++ + +EPTI+ P DS I+ E F P++ I + +E I + + L+
Sbjct: 324 GGTLDAKNLCIEPTILLNPPLDSAIMTEEIFGPLLPIITVKKIEDSIAFVRARPRPLAVY 383
Query: 188 LFTEN 202
FT+N
Sbjct: 384 AFTKN 388
>08_02_0811 +
21438848-21439001,21439469-21439662,21439769-21439897,
21441552-21441671,21441751-21441887,21441969-21442124,
21442565-21442943,21443041-21443157,21443225-21443371
Length = 510
Score = 36.7 bits (81), Expect = 0.023
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +2
Query: 23 REGYFVEPTIITGLPHDSPIVKTECFAPIVYCIEIPDLETGIQYNNEVEQGLSSSLFTEN 202
REG + P ++ + D I E F P++ I I +E GI + N GL +FT++
Sbjct: 371 REGNLIWPLLLDHVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTKD 430
Query: 203 L 205
+
Sbjct: 431 I 431
>07_01_0637 +
4767021-4767083,4767175-4767249,4767339-4767500,
4767624-4767702,4767922-4768076,4768225-4768288,
4768928-4769007,4769366-4769431,4769932-4769982,
4770087-4770238,4770270-4770287,4770323-4770413,
4771156-4771236,4771330-4771407,4772315-4772350,
4772425-4772468,4772567-4772645,4773035-4773125,
4773268-4773374
Length = 523
Score = 36.7 bits (81), Expect = 0.023
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +2
Query: 29 GYFVEPTIITGLPHDSPIVKTECFAPIVYCIEIPDLETGIQYNNEVEQGLSSSLFT 196
G FV PT++ + + K E F P++ ++ L+ IQ N + G +S+FT
Sbjct: 386 GNFVGPTLLADVKSEMECYKEEIFGPVLLLMKAESLDDAIQIVNRNKYGNGASIFT 441
>02_05_0131 +
26098459-26098668,26098788-26098863,26101972-26102178,
26102311-26102435,26102740-26102900,26102977-26103067,
26103161-26103310,26103396-26103632
Length = 418
Score = 36.3 bits (80), Expect = 0.030
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +2
Query: 38 VEPTIITGLPHDSPIVKTECFAPIVYCIEIPDLETGIQYNNEVEQGLSSSLFTEN 202
+EPT++ P DS ++ E F PI+ I + +E I Y + ++ FT N
Sbjct: 262 IEPTLLLNPPADSDVMTEEVFGPILPIITVKKIEDCIAYLKSKPKPIAMYAFTNN 316
>02_05_0127 -
26053055-26053306,26055415-26055564,26055657-26055747,
26055835-26055995,26056455-26056579,26056680-26056886,
26056936-26056996
Length = 348
Score = 35.5 bits (78), Expect = 0.053
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +2
Query: 35 FVEPTIITGLPHDSPIVKTECFAPIVYCIEIPDLETGIQYNNEVEQGLSSSLFTEN 202
++EPTI+ P DS I+ E F P++ I + E I + + L+ FT N
Sbjct: 186 WIEPTIVLNPPFDSDIMMEEIFGPLLPIITVKKTEDCIAFLKSKPKPLAIYAFTNN 241
>07_03_1752 -
29218348-29218524,29218593-29218736,29218957-29219148,
29219225-29219440,29219873-29220010,29220137-29220232,
29221204-29221357,29221976-29222098,29222291-29222418,
29222669-29222773,29223396-29223437,29223631-29223746,
29223805-29223916
Length = 580
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = +2
Query: 35 FVEPTIITGLPHDSPIVKTECFAPIVYCIEIPDLETGIQYNNEVEQGLSSSLFTEN 202
F PT++ + H I++ E F PI+ ++ E ++ N+ + GL ++F+ N
Sbjct: 391 FFPPTVLVNVNHTMKIMQEEAFGPILPIMKFNSDEEVVKLANDSKYGLGCAVFSGN 446
>04_04_0950 + 29609484-29611025
Length = 513
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -3
Query: 187 TGGEALFDLVVVLDPSL--KIWYLDAVDDGGEAFRLH 83
T G DL+V L P L + Y DA+ +G E F+LH
Sbjct: 385 TAGSGQMDLLVALHPDLSSRPEYFDAILNGLEVFKLH 421
>02_03_0151 - 15759254-15760459
Length = 401
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +3
Query: 93 NASPPSSTASRYQIL--RLGSNTTTRSNKASPPVYSRRTWGMFSSG 224
NAS PS A RY+++ +G + S+ S +TWG SSG
Sbjct: 316 NASEPSKGAVRYELVDAEVGGGHGSYSDSDSKNGRHEKTWGKRSSG 361
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,043,312
Number of Sequences: 37544
Number of extensions: 384177
Number of successful extensions: 1014
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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