Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021822
(840 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2595| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 6e-08
SB_52934| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 8e-07
SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_19772| Best HMM Match : Aldedh (HMM E-Value=5.9e-12) 46 4e-05
SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_12802| Best HMM Match : Aldedh (HMM E-Value=0) 40 0.002
SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_57708| Best HMM Match : Aldedh (HMM E-Value=0) 37 0.018
SB_20180| Best HMM Match : Aldedh (HMM E-Value=5.3e-08) 37 0.018
SB_6771| Best HMM Match : Aldedh (HMM E-Value=0) 37 0.023
SB_14803| Best HMM Match : Aldedh (HMM E-Value=4.9e-08) 36 0.041
SB_32640| Best HMM Match : Aldedh (HMM E-Value=4.9e-08) 36 0.041
SB_26122| Best HMM Match : Aldedh (HMM E-Value=0) 36 0.041
SB_16513| Best HMM Match : Aldedh (HMM E-Value=9.9e-05) 30 2.7
SB_46448| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_51089| Best HMM Match : I-set (HMM E-Value=1.4e-38) 28 8.2
>SB_2595| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 123
Score = 55.2 bits (127), Expect = 6e-08
Identities = 21/37 (56%), Positives = 30/37 (81%)
Frame = +2
Query: 14 IIEREGYFVEPTIITGLPHDSPIVKTECFAPIVYCIE 124
+++R GY+VEPTI+TGL HD+ IV TE F PI+Y ++
Sbjct: 1 VVDRPGYYVEPTIVTGLKHDAEIVHTESFVPILYVLK 37
>SB_52934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 51.6 bits (118), Expect = 8e-07
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +2
Query: 2 FGGKIIEREGYFVEPTIITGLPHDSPIVKTECFAPIVYCIEIP--DLETGIQYNNEVEQG 175
+GG+ ++R G+F EP + T + D I K E F P+V + D+E ++ N E G
Sbjct: 131 YGGRHLDRPGFFFEPAVFTNVEDDMFIAKEESFGPVVIISKFDDGDVEGVLESANGTEYG 190
Query: 176 LSSSLFTENLGDVFK 220
L+S +FT+++ +
Sbjct: 191 LASGVFTKDMSKALR 205
>SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/67 (29%), Positives = 37/67 (55%)
Frame = +2
Query: 5 GGKIIEREGYFVEPTIITGLPHDSPIVKTECFAPIVYCIEIPDLETGIQYNNEVEQGLSS 184
GG +G+F++PT+ + + D I K E F P+ I+ ++ I+ N GL++
Sbjct: 678 GGARHGNKGFFIQPTVFSDVTDDMRIAKEEIFGPVQQLIKFKSVDEVIERANNTTYGLAA 737
Query: 185 SLFTENL 205
+FT+N+
Sbjct: 738 GVFTKNI 744
>SB_19772| Best HMM Match : Aldedh (HMM E-Value=5.9e-12)
Length = 211
Score = 46.0 bits (104), Expect = 4e-05
Identities = 20/67 (29%), Positives = 36/67 (53%)
Frame = +2
Query: 5 GGKIIEREGYFVEPTIITGLPHDSPIVKTECFAPIVYCIEIPDLETGIQYNNEVEQGLSS 184
GG +GYF++PT+ + + + I + E F P++ D+ I+ N+ GL+
Sbjct: 102 GGDRAGDKGYFIQPTVFSDVQDNMRIAQEEIFGPVMQIFRFKDMNDIIERANKTTYGLAG 161
Query: 185 SLFTENL 205
S+ T+NL
Sbjct: 162 SVMTKNL 168
>SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 44.4 bits (100), Expect = 1e-04
Identities = 19/64 (29%), Positives = 38/64 (59%)
Frame = +2
Query: 5 GGKIIEREGYFVEPTIITGLPHDSPIVKTECFAPIVYCIEIPDLETGIQYNNEVEQGLSS 184
GG ++E Y + PTI+TG+ P+++ E F PI+ + + L+ I + N+ ++ L+
Sbjct: 274 GGDTDDKERY-ISPTILTGVKPSDPVMENEIFGPILPIVSVDSLDDAIDFINDRDKPLAL 332
Query: 185 SLFT 196
+F+
Sbjct: 333 YIFS 336
>SB_12802| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 880
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +2
Query: 29 GYFVEPTIITGLPHDSPIVKTECFAPIVYCIEIPDLETGIQYNNEVEQGLSSSLFTENLG 208
GY++ P ++ D +VK E F P++ + E + N GL+ +FT +L
Sbjct: 633 GYYMSPCVMAECTDDMTVVKEEIFGPVMTVLTFQTEEEAVTRANNTTFGLAGGIFTRDLN 692
Query: 209 DVFKWIG 229
+ IG
Sbjct: 693 RAHRVIG 699
>SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +2
Query: 29 GYFVEPTIITGLPHDSPIVKTECFAPIVYCIEIPDLETGIQYNNEVEQGLSSSLFTENL 205
G + PT+IT + S IV E F P++ + + + N GL +S++TENL
Sbjct: 984 GCYYPPTLITNVQPVSKIVMEEVFGPVLVVLTFRTAKEAVAIANNTNFGLGASVWTENL 1042
>SB_57708| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 528
Score = 37.1 bits (82), Expect = 0.018
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +2
Query: 35 FVEPTIITGLPHDSPIVKTECFAPIVYCIEIPDLETGIQYNNEVEQGLSSSLFTENLGDV 214
F EPT++T + D + K E F P+ + + N + GL+ ++++L V
Sbjct: 364 FFEPTVLTDVSPDMLVCKEETFGPLAPLVRFKTEAEAVAIANSTQSGLAGYFYSQDLSQV 423
Query: 215 FK 220
++
Sbjct: 424 WR 425
>SB_20180| Best HMM Match : Aldedh (HMM E-Value=5.3e-08)
Length = 266
Score = 37.1 bits (82), Expect = 0.018
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +2
Query: 20 EREGYFVEPTIITGLPHDSPIVKTECFAPIVYCIEIPDLETGIQYNNEVEQGLSSSLFTE 199
ER+ FV P I+ + I + E F P+V + D++ + Y +E G SLF++
Sbjct: 120 ERQESFVYPAILYPVNSTMKIYEEEQFGPVVPILSFKDIQEPLDYVSESNYGQQVSLFSK 179
Query: 200 N 202
N
Sbjct: 180 N 180
>SB_6771| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 523
Score = 36.7 bits (81), Expect = 0.023
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +2
Query: 5 GGKIIEREGYFVEPTII-TGLPHDSPIVKTECFAPIVYCIEIPD---LETGIQYNNEVEQ 172
GG + GYFVEPTI+ T P++ ++K E F P+V PD E +N E
Sbjct: 378 GGNCDKSVGYFVEPTIVETSNPYNK-MMKEEIFGPVVCAYVYPDEKYKEMMDVVDNTNEF 436
Query: 173 GLSSSLFTEN 202
L+ ++F E+
Sbjct: 437 SLTGAIFGED 446
>SB_14803| Best HMM Match : Aldedh (HMM E-Value=4.9e-08)
Length = 195
Score = 35.9 bits (79), Expect = 0.041
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +2
Query: 29 GYFVEPTIITGLPHDSPIVKTECFAPIVYCIEIPDLETGIQYNNEVEQGLSSSLFTEN 202
G FV PT+++ + + K E F P++ + LE ++ N G +++FT++
Sbjct: 114 GNFVGPTVLSNVTPEMTCYKEEIFGPVLVALNADTLEDAVEIINRNPYGNGTAIFTKS 171
>SB_32640| Best HMM Match : Aldedh (HMM E-Value=4.9e-08)
Length = 195
Score = 35.9 bits (79), Expect = 0.041
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +2
Query: 29 GYFVEPTIITGLPHDSPIVKTECFAPIVYCIEIPDLETGIQYNNEVEQGLSSSLFTEN 202
G FV PT+++ + + K E F P++ + LE ++ N G +++FT++
Sbjct: 114 GNFVGPTVLSNVTPEMTCYKEEIFGPVLVALNADTLEDAVEIINRNPYGNGTAIFTKS 171
>SB_26122| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 462
Score = 35.9 bits (79), Expect = 0.041
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +2
Query: 29 GYFVEPTIITGLPH--DSPIVKTECFAPIVYCIEIPDLETGIQYNNEVEQGLSSSLFTEN 202
G+FVEPT++ G + D+PI + E P+V I + N GLS+S+++++
Sbjct: 376 GFFVEPTVLGGFKNSMDNPINQLEVQGPVVRIIPFRSESEALSGVNVTAYGLSASIWSKD 435
>SB_16513| Best HMM Match : Aldedh (HMM E-Value=9.9e-05)
Length = 301
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 35 FVEPTIITGLPHDSPIVKTECFAPIVYCIEIPD 133
F EPT++T + D+ + E F P+ +PD
Sbjct: 229 FFEPTVLTDVNQDTLVCMEETFGPLAPLFSLPD 261
>SB_46448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 395
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = +1
Query: 529 TKTNDGTNDTFED-SYLDKCC 588
TKT DG DT E SY D CC
Sbjct: 304 TKTQDGKQDTTEQKSYKDSCC 324
>SB_51089| Best HMM Match : I-set (HMM E-Value=1.4e-38)
Length = 1334
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 522 KRSPKPSIKSYLEGNEMNVGSICRTGSVSL 433
K SP+P +K L GN++ G + GS+ +
Sbjct: 1098 KGSPQPEVKWMLNGNDIIFGKVLANGSLKV 1127
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,937,868
Number of Sequences: 59808
Number of extensions: 438803
Number of successful extensions: 2928
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2926
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2371447782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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