Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021821X
         (499 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457327-1|CAG33608.1|  305|Homo sapiens ZNF385 protein.               30   5.1  
BC029752-1|AAH29752.1|  366|Homo sapiens ZNF385 protein protein.       30   5.1  
AY461717-1|AAS19275.1|  366|Homo sapiens retinal zinc finger pro...    30   5.1  
AK024404-1|BAB14910.1|  305|Homo sapiens protein ( Homo sapiens ...    30   5.1  
AF304052-1|AAL08625.1|  366|Homo sapiens hematopoietic zinc fing...    30   5.1  

>CR457327-1|CAG33608.1|  305|Homo sapiens ZNF385 protein.
          Length = 305

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = -2

Query: 480 GLFHGPFSLVLVLSIAGSSAVASRPASGAPL---PPCST*ILSP 358
           GL   P ++  V++ A  S ++ RPA  APL   PP +  +L P
Sbjct: 245 GLLPSPLAVAAVMAAAAGSPLSLRPAPAAPLLQGPPITHPLLHP 288


>BC029752-1|AAH29752.1|  366|Homo sapiens ZNF385 protein protein.
          Length = 366

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = -2

Query: 480 GLFHGPFSLVLVLSIAGSSAVASRPASGAPL---PPCST*ILSP 358
           GL   P ++  V++ A  S ++ RPA  APL   PP +  +L P
Sbjct: 306 GLLPSPLAVAAVMAAAAGSPLSLRPAPAAPLLQGPPITHPLLHP 349


>AY461717-1|AAS19275.1|  366|Homo sapiens retinal zinc finger
           protein protein.
          Length = 366

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = -2

Query: 480 GLFHGPFSLVLVLSIAGSSAVASRPASGAPL---PPCST*ILSP 358
           GL   P ++  V++ A  S ++ RPA  APL   PP +  +L P
Sbjct: 306 GLLPSPLAVAAVMAAAAGSPLSLRPAPAAPLLQGPPITHPLLHP 349


>AK024404-1|BAB14910.1|  305|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14342 fis, clone THYRO1000569, highly similar to
           Mus musculus hematopoietic zinc finger protein mRNA. ).
          Length = 305

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = -2

Query: 480 GLFHGPFSLVLVLSIAGSSAVASRPASGAPL---PPCST*ILSP 358
           GL   P ++  V++ A  S ++ RPA  APL   PP +  +L P
Sbjct: 245 GLLPSPLAVAAVMAAAAGSPLSLRPAPAAPLLQGPPITHPLLHP 288


>AF304052-1|AAL08625.1|  366|Homo sapiens hematopoietic zinc finger
           protein protein.
          Length = 366

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = -2

Query: 480 GLFHGPFSLVLVLSIAGSSAVASRPASGAPL---PPCST*ILSP 358
           GL   P ++  V++ A  S ++ RPA  APL   PP +  +L P
Sbjct: 306 GLLPSPLAVAAVMAAAAGSPLSLRPAPAAPLLQGPPITHPLLHP 349


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,878,912
Number of Sequences: 237096
Number of extensions: 837791
Number of successful extensions: 2097
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2097
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)