Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021821X
         (499 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g05940.1 68414.m00623 amino acid permease family protein low ...    29   1.7  
At1g50700.1 68414.m05701 calcium-dependent protein kinase, putat...    27   5.3  
At1g22380.1 68414.m02799 UDP-glucoronosyl/UDP-glucosyl transfera...    27   7.0  
At3g18830.1 68416.m02391 mannitol transporter, putative similar ...    27   9.3  

>At1g05940.1 68414.m00623 amino acid permease family protein low
           similarity to SP|P30823 High-affinity cationic amino
           acid transporter-1 (CAT-1) {Rattus norvegicus}; contains
           Pfam profile PF00324: Amino acid permease
          Length = 569

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +3

Query: 6   AC*TNRFKFRELSTHFPRTVSIKY-YSYHSFNQ 101
           +C  N   + ELS+ FP  V   Y YSY +FN+
Sbjct: 95  SCVLNALCYAELSSRFPAVVGGAYMYSYSAFNE 127


>At1g50700.1 68414.m05701 calcium-dependent protein kinase, putative
           / CDPK, putative similar to calmodulin-domain protein
           kinase CDPK isoform 9 [Arabidopsis thaliana]
           gi|1399265|gb|AAB03242
          Length = 521

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = +2

Query: 359 GLKIQVLQGGNGAPEAG--RDATAEDPAMDSTKTKEKGPWNKP 481
           GL ++  Q G  + E    R +T +DP+  ST T +  PW  P
Sbjct: 10  GLVMKPQQNGERSVEIENRRRSTHQDPSKISTGTNQPPPWRNP 52


>At1g22380.1 68414.m02799 UDP-glucoronosyl/UDP-glucosyl transferase
           family protein contains Pfam profile: PF00201
           UDP-glucoronosyl and UDP-glucosyl transferase
          Length = 467

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 389 NGAPEAGRDATAEDPAMDSTKTK 457
           +G PE G DAT + PA+  + TK
Sbjct: 76  DGLPETGVDATQDIPALSESTTK 98


>At3g18830.1 68416.m02391 mannitol transporter, putative similar to
           mannitol transporter [Apium graveolens var. dulce]
           GI:12004316; contains Pfam profile PF00083: major
           facilitator superfamily protein
          Length = 539

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -1

Query: 475 IPWTLLLGLSAVHSRILSSGVAA 407
           + W L+LG+ AV S IL+ GV A
Sbjct: 192 VGWRLMLGIGAVPSVILAIGVLA 214


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,865,148
Number of Sequences: 28952
Number of extensions: 113860
Number of successful extensions: 278
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 278
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 878448512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)